Array 1 51168-51997 **** Predicted by CRISPRDetect 2.4 *** >NZ_SPOZ01000013.1 Streptococcus sp. LYSM12 NODE_13_length_75838_cov_24.7799, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 51168 36 100.0 30 .................................... CGTCTGGACTAATTATTCGCTCATAGTAGC 51234 36 100.0 30 .................................... CGGTAAGTAGTGCTGTGCGCAACACCGTCT 51300 36 100.0 30 .................................... AGGAGGTTTATGAAGAAATTGAATTAGCGA 51366 36 100.0 30 .................................... TTTTAAATCTCTTAATCCCTTGTGGCTCTA 51432 36 100.0 30 .................................... TGAAGCCTTGCAAGCCTGGGCAATGTTCTC 51498 36 100.0 30 .................................... CAGAGATTAAAATAACTCTTAAAGTTGAGG 51564 36 100.0 30 .................................... TGCAGGAATTGCTTCTGCTATGATAATTGT 51630 36 100.0 30 .................................... AAGATGATGACTTCGAAGATGACGAAGAAG 51696 36 100.0 31 .................................... CACCGAGTTATGCGTGCATGATGTGCAAGAT 51763 36 100.0 31 .................................... CGAATGTTAAATCCAAAACGTACGACAGTTG 51830 36 100.0 30 .................................... AACAATGACAATCGAGATAACAGATTATAA 51896 36 100.0 30 .................................... AGCAGCTAAAAGCAATGCACGGATACAAGC 51962 36 91.7 0 ........T......................C...T | ========== ====== ====== ====== ==================================== =============================== ================== 13 36 99.4 30 GTTTTAGAGCTGTGTTATTTCAAATGGTTCCAAAAC # Left flank : TGGAAAGCAGTCCTAGAGTAGAACATTGAGGGGGGTAATAAGGAGATAAAAATGTAGCTAACAATGTTTTATAAAGAAGCGGTGGTAGTTACGGGGGACATTTTCAAATGTAGGTGGTGGTACAGAGGGGATGCGATGATGAAATGCTAGAAAGTGTTTTAGCATCTTTCTCAGTAGCTATAATTGTTGAAATTCTAAGAATAGAAAAGGAAATGTAGCTATTTGATACATATTTGAAGATATGCCGAGCGATTTGCAAAAATGTAGTGGCTCCACAGTGGTAGTTGGGTTTGTAGATAGAAAGTCGACCGCTTATTCAGGAAGATTAATGAAAGCACTAGAAAAACAAGTATAACTGTAATATATTGTGCTTGGAACGATTGATTAAAACAGCTGTTTAAGGTATAATGATAGGTAAGAGATAGAACCATTTGAAATTGAAGTCTAGCTGGGATGAATGGCGCGATTACGAAATGTTCTGGATAAAAATTGTCCACGAG # Right flank : TGTTCGGGCTTTCTGTCGTGTTCATTCGAAAGTTGGTAGAGCTTGCTTTGAAAATAGGAGTCTAAAAGGTAGAGGCTCTCAAATTTTGAAGGCTTGAGTTTCCCTTAAAATTCTGTTATACTGAATGTCAATAAATCGAAAAAAGTGCTAGATAGTGCTTTTTTCTTGTTATGAGAGGGAGGAGATATGAATTACATTTGGTCTTATTTGAAAAAGTATCCTAGGTGGTTGGTCTTGGACTTGGTTGGTGCCATTTTTTTTGTGGTTGTCAATTTGGGTCTGCCGACCGTTTTGGCTCGAATGATTGATGAGGGAATCAATAGCAGAGATACAGAACGTTTGTATTTTTGGGCAATGATGATGCTTGTTGTGATTGTCCTTGGTACCTTGGGGCGGATCGTCTTGTCGTATGCAGCCAGTAAACTGACTACGAGTATGGTCCGCGATATGCGAAATGACCTCTATGCTAAGCTGCAGGAATATTCACATCATGAATATGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTATTTCAAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //