Array 1 10750-14334 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBZA01000113.1 Ardenticatena maritima strain 110S, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 10750 30 100.0 35 .............................. TTGCCACTGAAACGGCGCTTCGCGATTTGTTCCAC 10815 30 100.0 36 .............................. CTTCGATCAGCTGTTGGTGGATGGGTGTGGCCTCTG 10881 30 100.0 37 .............................. TGCACATGACGACGGGACGCTTGCAATTGCGGTCTCT 10948 30 100.0 37 .............................. CTCGTATTCCTTCCCTGGGTTTGGTTTCTTCTTTTGT 11015 30 100.0 38 .............................. TCATTCGTCAAACAAGCCCCATCGCTGCAATTTGCGAC 11083 30 100.0 37 .............................. TTCTTTAGTTAGCCCACGTCGCTATCGCCGAAGATGT 11150 30 100.0 37 .............................. CTTTCCCCTGAGCAATTTGAAGCCGCAAAACATTCTA 11217 30 100.0 39 .............................. TCAATACAGCGCTGAATTGAAGGTTGACGGTTATGGTAC 11286 30 100.0 38 .............................. AAAGAGACGGCTACCTTCTCTTATTTGCTTCTCTACTC 11354 30 100.0 38 .............................. AACGCACCAGCGCCGCGCGGCGGTCGCTCATGCCCTTG 11422 30 100.0 38 .............................. TACCACGCCGCAAACGGCGGCACATACTCAACCAGAAC 11490 30 100.0 35 .............................. TTCAAAGCGACAAGGTTTGAAGATGTCGGCAAGTA 11555 30 100.0 39 .............................. AAAAAGAAAGGAGAAAAAGGACAATGAAAAAGAGCGATA 11624 30 100.0 37 .............................. TCAAATTAGCAATCGCTAGCCCAAGAAAACTGCCAAT 11691 30 100.0 37 .............................. TGCTGACGCCGCGGCGCGTGAGCACGTTCAAGCCAGC 11758 30 100.0 37 .............................. CTGACGGGTTCGCCGACCATATATATTCAAACTATCC 11825 30 100.0 36 .............................. TTCAGGCGTACATTGAGTATTGGCTAGAAATTATTG 11891 30 100.0 40 .............................. CAATGTTTGCGGATGAAGCGGCAGAGTTTGAGATGGTCAG 11961 30 100.0 39 .............................. TTTTTCGGGAAGGTGTCAACATCTCGCAAGCGAGTCACA 12030 30 100.0 37 .............................. CCAAGAAGTCGTGGTGCCTGGCACCACGACCTACGAA 12097 30 100.0 38 .............................. TCGCCATCACTCACCACCGCATCGCCGTCAATCACCGC 12165 30 100.0 36 .............................. GGGTGCTCGGGGGTCGTGCCCGAGGCGCGTATATTC 12231 30 100.0 36 .............................. TAGAAGACATTGATACGGACGTTTCCCAACGCACGC 12297 30 100.0 37 .............................. ACCCGCGCAAAGCCGACCCCGTGGGCGTGGACTTGCA 12364 30 100.0 37 .............................. TCGAGGTGGAGACGCAAGACATGATACATACGCGTTT 12431 30 100.0 36 .............................. AATGAACAGAATGGCGCGCGGGTCAATGTAGCCGTC 12497 30 100.0 36 .............................. GTCGGAATCAAATTCGTCGAGACCGTCTTCGAGCAT 12563 30 100.0 36 .............................. TCGCCCCCTGTAATGTCGTTCCACGCGCGCACCCAG 12629 30 100.0 35 .............................. CCCAAGAAGGAAAACGAAACCTAAGCATCACCATC 12694 30 100.0 39 .............................. CAGGAAATCGAGGCTGAAAAGGCGGACGCCGGTTTTGTG 12763 30 100.0 35 .............................. CGGTTTGGTTGGCGGGCGGGGCGAGCCCCATGCAA 12828 30 100.0 37 .............................. GTTCACGTGGGCGGCGTGCGCGCCCACGATGATAACC 12895 30 100.0 35 .............................. TGCGCGTGGGGTTCACGTGGGCGGCGTGCGCGCCC 12960 30 100.0 37 .............................. CCAGAACCCAAGCCGCAAATCAACCCGGACACGTGTG 13027 30 100.0 38 .............................. TAAAGCGGGCGATGTTTCATCTGTGCAGGCAATCGTAG 13095 30 100.0 37 .............................. TAATGGACGGCGCACCTATGCGGCGTGTCCAGGTGGC 13162 30 100.0 36 .............................. CGATACGCATCAGTTCAGGCAATTCCTTCAACAACG 13228 30 100.0 35 .............................. AATACGGCGACATGCGGCTACTTGGCCGCATTGTC 13293 30 100.0 39 .............................. CATATTCTATTTTCTCATAAATCTGGCCGCGGTACTCTT 13362 30 100.0 36 .............................. CACGTGTGCCAGGTTTTGTTCTACTCTTCAACAAAA 13428 30 100.0 38 .............................. CGCGCACGCTACACGCAAACTACGCGCAATTACGCGTA 13496 30 100.0 37 .............................. AAGGCGTGCGGTGTTCCACCTGCACGGTTGCGGTGTT 13563 30 100.0 38 .............................. TCATATATCCGCAACCGACACCGAGACGAAGGAGCACC 13631 30 100.0 38 .............................. CTACTCCAAAACATGGCTTGTTGCAGCAAGATAGCGGC 13699 30 100.0 38 .............................. TTTTTCGTGGACGCCTGTGAGAGCGGGAATAGTGTTCT 13767 30 100.0 36 .............................. GAGGTGAGTGTGTGGCTCGCGCGCATAGTGCTACTG 13833 30 100.0 35 .............................. TGCTACTCATCACCCAGCGCGGGTTTTCAATCGGC 13898 30 96.7 39 ......................A....... CGTATTCGAGCATGTCAACTTCTGATTGGTAAAAGGCGC 13967 30 96.7 36 ......................A....... TTCGCTACGCGCGTGAGTATGCGCGCATGTTGCGTA 14033 30 96.7 39 ......................A....... GGGATCAACGTGGCGGTGGCGGACATAGCGCCGGGTGAA 14102 30 96.7 37 ......................A....... AACGCTCTCATCGTCGCCGTCGGACGCCGCACGCACC 14169 30 96.7 37 ......................A....... AAATCGAAATGCTACCCGCGCCTGGTCCAGGCGCGGG 14236 30 96.7 39 ......................A....... CCGGTCGGTGCAATTCGCGTTGCGGCCGTCTTTGAAGCC 14305 30 96.7 0 ......................A....... | ========== ====== ====== ====== ============================== ======================================== ================== 54 30 99.6 37 GTTTTTAGCCTACCTATGAGGGGTTGAAAC # Left flank : CGCACCGCCGGCATGTCAACGTGCACATGCGCTGTTTGCACGCCAAACGGGGCGGCGTTGCGCGCCGTCTGGGCGACTTTGGCGGCTTTGAGCAGGGCTTTGCTGGGGACACACCCCGCCCAGGTGCAATCGCCGCCGATGCGCTCTTTTTCGACCAGGGCAACAGGGACGCCCAGGTAGGCGGCACTGCGGGCGGCGGTCAAACCGGCAGAGCCCCCACCAATGACAATGAGCGGGTAGGTTTTGCTGGTGGACATGATGTGTTCTCCTTTGACGCTTGGTTCTGAGGGAATTGTGGCTGAAATACGGGCAAAGTCCATTTTTTCATGCCGTCGCAGGCTGGCGCTGATGTCGTCGAAGTGGAATCGCGCATGCAGCCCAGGGGTTCGACGACAGTATGAGCGCCCAAACAGGCGTCATGGCACGAAGCAATTTGACAAATTCACTTTTCAGGCATAGTTTAGGTGCAACATTGGTGCTTGAAAGTTGCGCAAATCTTG # Right flank : CGCGTTGGGCTTTTTGCCCCCATGATGCCTTCTGAACCCCTGCGACGATTGCATGTTGCCCCGACACACAAACACCCTCCCCCGCTCACTCTTCACGACGTCAATCGCGGGAAGTGTGCTATAATGCGCCCATGCCAACATCCACACATGGGCATGCGCCATGAGCCAGCAGCCACCACTGCAAGAACTGGAAGGGACCGTCGAGCGGATAACCTACCAGAACGAGGAAAACGGCTACACCGTCGCCAAGATACAACCCAAGGGCAAGCGCTACGAAATCACCGCCGTGGGGACGCTCAGCGGCGTGCAAGTGGGGGAATCCGTGCGCCTGCGCGGCTTCTGGACGACCCACCCCGAATATGGGCGGCAGTTTGAAGTGCGTTCCTACACCGTGCGCCTGCCCGCCACGATTGAAGGCATCCGCAAATACCTGGGAAGCGGACTCATCAAGGGGATTGGTCCCGTGATGGCGGAACGCATTGTGGCGCACTTCGGCAAGG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGCCTACCTATGAGGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.10,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 10072-9223 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBZA01000132.1 Ardenticatena maritima strain 110S, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================================== ================== 10071 27 100.0 48 ........................... AAGCACGGCGGCGGCATCTACAACCACAATGGCACGGTGACGGTGAGC 9996 27 92.6 48 ...............A.....A..... AGCGGCGACGGCGGTGGCATTGACAACGAAGACACGCTGACGATGAAC 9921 27 100.0 48 ........................... ACCAACAAGGGCGGCGGCATCTACAACAATTACATGGCAACGGTGAGT 9846 27 88.9 48 ......G......A............T TACTACGGCGGCGGCATCTACAACCACAATGGCACGGTGACGGTGAGC 9771 27 92.6 48 ...............A.....A..... AGCGGCGACGGCGGTGGCATTGACAACGAAGACACGCTGACGGTGAAC 9696 27 100.0 45 ........................... AATCTGGGCGGCGGCATCTACAACGGTGACACGCTGACGGTGACC 9624 27 100.0 48 ........................... ACCAACACCGGCGGCGGTATCTACAGCAATTACATGGCAACGGTGAGT 9549 27 92.6 51 ......G......A............. AACAATTCTTTCGGCGGCGGCATCCACAACTACGGTGACATGACGGTGACG 9471 27 81.5 45 ..............T..T...AG...T TTCTTCGGCGGCGGCATCTTCAACGATAGCATGCTGACGGTGACG 9399 27 96.3 48 ...............C........... ACCACCAACGGGGGCGGCATCTGCAACGGTGACACGCTGACGGTGACC 9324 27 100.0 48 ........................... GCCTTCGGCGGCGGCATCTTCAGCGAGGTTGGCACGGCAACGGTGAGC 9249 27 81.5 0 ..............T..T...AG..G. | ========== ====== ====== ====== =========================== =================================================== ================== 12 27 93.8 48 AACAGCACCATCAGCGGCAATTCGGCC # Left flank : TCCTGCGCCGCGTGGTCTACTACTACCGGCAGCTGCGGGCGCTGCCGCGCAAAGCCCGGCGTGCCTGGCAAAAGAAGCTGGCGACCACGCTGGCGGGGGCGGCGCTGCTGCTGGCGCTGGCCGGGCCGTTGGCCCCACCCGTCCACGCCGCCACCATCACCGTGGATGGCACAACCTGCACCCTCGCGGAAGCCATCACCTCGGCTAACAACGACAATGCAGCCGGGAATGGGTGCGTGGACGGCAGCGGTGCGGACACCATTACCCTGCAAACGGACGTGACGCTGACGAGTGCCCTTCCTAACATCACCAGCCAGATCACCATAGAAGGGAACGGCCACACCATTGACGGCAACAACGGCGTGTACCACGTGCTGTATGTGGCCAACACCGGCGACCTGACGCTGAACAACGCCACCATTACCGGCGGCAATGCCAATGGGAGTGGGTCCGATGGCAACGGCGGCGGCATCTTCAACGATGGCATGCTGACGGTGACG # Right flank : GTTTGGGGCGGCGGCGGCATCAAGAACTTAGGCACACTGACGCTCAACCGCAGCCTGATCTCCGGCAACACGGCTGCAAGCAGCGGAAATGAAATCTATAACTCGGACACTTTCAATGCCAACAACTACAACCTGTTTGGCCACAGCGGGGAGAACAGCGGCCAGGCGTTCGATGGTTTCACGCCTTGTTCTGGAGCCGGTTGCACCGACATTACCGCCACCAGCGACGGCACAAATGTGGCGCTGGCCAGTATCCTCAATCCGGTGCTGGCGTTGAACGGCGGTCAGACCAAAACACATTCCCTGGTGGACGGCAGTCCGGCGTTGGATGCTATCCCTGCCGGCTCCTGCGGCGGCCTCACCCAGGACCAGCGCGGCTTCACCCGGCCAGTCAACACCAACTGCGACATCGGCGCCTTTGAGCTGCAAAGCAATGAGACCAGCTATTACGCCAACAGTTTCCCGGCTACCAACATCGGCGGCACAAATGTGAGCGTGAC # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:0.69, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AACAGCACCATCAGCGGCAATTCGGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 2761-3842 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBZA01000158.1 Ardenticatena maritima strain 110S, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 2761 37 100.0 37 ..................................... ACACTTGGAATGTACCGAGGAACTTCTGTGTATCTTC 2835 37 100.0 37 ..................................... CCACGCAAGGAGCGTCCACAACTGGCTGGGGCGTTGC 2909 37 100.0 38 ..................................... TCTACCAGTGGCGGCGGCGTATCATCCACAACAGAAAA 2984 37 100.0 37 ..................................... CCAGGATTACTAGCCAAACGTTCGATAACGGGTTTGT 3058 37 100.0 39 ..................................... TACGAGGGGCGCGATTGGTCTTCGTGGACTTCTGGTCGG 3134 37 100.0 37 ..................................... TTCGCCCGCGACGTGTACCTTATCCAACGCAAGGTGG 3208 37 100.0 37 ..................................... CGTCGCGCATGACGACGGTGACGGTTTTGTCGCTAAG 3282 37 100.0 37 ..................................... AAAAGTTGTAGTCTTCAGTGACGTTGCCGTACACGTA 3356 37 100.0 37 ..................................... CTTCACGGGCGCCACGAGGTACAAATGCGACGAATAG 3430 37 100.0 40 ..................................... TTTAGTCCTCCGACTCTTCTATTTTCTCTGAACCAACTTC 3507 37 100.0 39 ..................................... TAAATAATGATAAATTTCTGATTGTCGGGGACCTTCTCA 3583 37 100.0 38 ..................................... TTCGGCGATGTCAGAAGCTGAATTTTCAGCAAGGAAAG 3658 37 100.0 37 ..................................... TCCATCCGGGGCTTTTCCCAACATACCGCTACCATCC 3732 37 97.3 37 .........A........................... GGATGTTTCCTTGTTGCTTATTCTGTGCATAGTCTTC 3806 37 91.9 0 .........A........................CG. | ========== ====== ====== ====== ===================================== ======================================== ================== 15 37 99.3 38 GTCTGAAAAGCCCTAATCCCCGCAAGGGGATTGAAAC # Left flank : AAGAAGCCGCCCGCGACCCCGATATCGTGGTGATGAGTGCGCGCACAGGCGAAGGGCTGGACCATCTGCTTGAACGGGTGCAGGGCGTCTTGCAGGATCTCTTTGTCGAAGTGGACGTCCTGCTGCCCTACGCCCACGGTGCACTTCTGCATGAAATCCATGAGCAGGGCACGATTGAGTCCGAGGAGCATACCGCCGACGGCACGCGCGTGCACGCCTACGTGCCGGCGTGGCTGGCGGCACGCCTGACCGAAGCCACCCGCAACGCCTGAGCACAACATTTTGCCAGGCAAATAGTTGAACGCGACAAAGTTCTGTCAGACCCCCCTGAAACGGGGCGATTTTGGGGGCGATTTTGAGGGGGTCTGAAAACGTTCAACTTCCTGGAAAAAGGAGCGGTATTTTGCATGGTTTTGGGGGTTGACAAACGCGCCATTTTCCTGTATGCTGTGCCACAGATGAAGCGGACAAGCGGGCGACACCCATAGCACATCCGTACA # Right flank : CACACCACTTCCCCACTCCTCACGGCGTATAACCCGCCAGCAGACCACATCGTCAACCTGCAACAGCAGTTTGCTCCTCTCACGATATTACCCAGCCACAGAACCGCGCCTGCCGGTGCGGGTTGCAGTGGGGTATAATGAAAGAGAGACAAACGCGACGCCGGACAAGCAGCCGGGGCGCTCGCGGTGCTGCTGCGGGTTGCGGGCGTGCAGACTGCTGAACGTCGAAGCCCTGCATGCGGCGAGGGGAAACGCGGCAACAACAACCGAAAGGAGGAAGGTGTATGGAATCGCAAGGGTTGAGCCGTGTGACCATGTACGTGCCAAACGGCACGCCGGAAGATTTGCTGTTGGCTAAAATCTTCGAGCATACCGAGGTGCTGGCTGCTTACGCCTCTGATTGGATGGCAGCGGCGTTATGGGGGTGGGTGCCGCCTGAGTGGGCTTACTTGCGTGTCGCCGCCGTCGGCGTGGCGTATCAGCCGGAAGTCTTCGAGGCG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAAAGCCCTAATCCCCGCAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.00,-10.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : NA // Array 1 54-467 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBZA01000201.1 Ardenticatena maritima strain 110S, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 54 37 100.0 39 ..................................... GACTTCTTCGATGAGTTCTTGCAACCCATCGAAGCGCAA 130 37 100.0 42 ..................................... TCCCACCAAAATACGTCACGTTGAGACCTTTCCACCCAATCC 209 37 100.0 36 ..................................... GCCAACACATGGCGGCGTAGTATCCGAATACCCGGC 282 37 100.0 37 ..................................... GAAAAGTAGTGTACTCATACAATTCCCCCTTTGTTTG 356 37 100.0 38 ..................................... GAAAAGTCGTGTGGCAACTGCCACACGTGAAGGTATAG 431 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 6 37 100.0 39 GTCTGAAAAGCCCTAATCCCCGCAAGGGGATTGAAAC # Left flank : CTGTGCCACAGATGAAGCGGACAAGCGGGCGACGCCCATAGCACATCCGTACAG # Right flank : CTTCATTTTTTTAGAGAATATAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAAAGCCCTAATCCCCGCAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.00,-10.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [35.0-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : NA // Array 1 1873-3590 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBZA01000216.1 Ardenticatena maritima strain 110S, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 1873 37 100.0 37 ..................................... TCCTCAAGCGCCAAAGCATCCAGAAGGCCGGCAAGAT 1947 37 100.0 38 ..................................... CTCGCGTGGGTGTCGTGAAAAGCGCGCCCGCCGTGCTG 2022 37 100.0 36 ..................................... CCCTTCTGCCCGGGAGTTGGAAGAAATAGAGACATG 2095 37 100.0 36 ..................................... GGCGGATTTCTTCGATGACACCTACCAGCTCTACCC 2168 37 100.0 37 ..................................... TCTTTTTTTTCGTGTTCGTACCGGCGGCGGCGCTGGC 2242 37 100.0 35 ..................................... TTCTGTGGTCAATTGTATATCGTCAATGCCGCAAC 2314 37 100.0 37 ..................................... TCGATATTCCAACGTGGATAAAGACGTTGGCGGATGC 2388 37 100.0 36 ..................................... TGCCTCGACGCAAGGTCTCGGCTGCGGCACGGCTTG 2461 37 100.0 36 ..................................... TCAGCAATGAACTGATGGTAGACAGCACGCCCGCTG 2534 37 100.0 36 ..................................... GCATGGTCGCCGTGGCGGTAGGTGGGTTGTTGATTG 2607 37 100.0 36 ..................................... TACATGCGGCGCTTCAATGCCGACGGCGACGATGCT 2680 37 100.0 36 ..................................... CTTTTCGCTCATGCTTCACCTCCCTGGTCGTTTGTT 2753 37 100.0 37 ..................................... TCGCCGTACCCGGCGACCCCCAGGCGACTATCACCAT 2827 37 100.0 35 ..................................... CTCTCGTATCTCGTTCCGCTCCTCTATCGTCCGAC 2899 37 100.0 35 ..................................... TCCTGGATACGTGCCCTTGCAGATGCCATTCCGCC 2971 37 100.0 38 ..................................... ACGTGGTGGTTGTGGCGCTTGAACGTCCGGCTTACGGA 3046 37 100.0 35 ..................................... CTAGCAAAAGCACCCGCCAAACGACGTGCCACAGC 3118 37 100.0 35 ..................................... CCGATAAGTCCACCGATAAAATAGAGTTTCCGCCG 3190 37 100.0 36 ..................................... GTTCTCGTGTAAGACGTTTCAGGCGACTGTACGGTC 3263 37 100.0 36 ..................................... GACGTGTGCGGGGTCCGGCGGGGGGAGTTCGAGCGT 3336 37 100.0 37 ..................................... GTACATCATGGCGCTCGTTGTGAAGCGAGGGCGCGGC 3410 37 100.0 35 ..................................... AAAGGTTTTCATTCAGGAGCGCCGGGACTGGTCGC 3482 37 100.0 35 ..................................... CTGTCGGCTGCACGGAGAGAGGCTGGCGTAATATC 3554 37 83.8 0 ...............................ACCGTT | ========== ====== ====== ====== ===================================== ====================================== ================== 24 37 99.3 36 CTTTCAGCCGTATTCGATCCGCAGGGGATACTGAAAG # Left flank : GCTCGCGGGCGTGTTACCGTTGCGGGACAGCGCCGGACTTTCACCGGTCTTCCTCCATTGTGCGCCGCGCATCCGGGCGACTGGCGCACCTGCACCGAGCCATATGCAATTGTCAACAGGTCAAAGCAGGCGCGATTGTAAGAAAAACCGAACGGGCGTCAAGCGGCGGGACACGAACAGCGCGCAAAACGACGCTGAGCGAGACGGGTTCGCAACCTAACGGGTGTTTGGTCAGCGTGTTCGGGTTGATTTTGCAAACAAAGGAAGTTTGCGTATGTTTGATGCGTAGATTTGCGCATACTTTGTATCACAAAATAATTCGCAACCCGACGGGGGTTTTTGCCACGCGAGTGGGTTGCGAAATGCTTTGTGTGTCAAAGGAATTTTGCGAATAAAACAAGGTGTTTTGCGCGTGTGGCGAGCCACTGAGAGGCGCGCTGCGCGGCGATTTGACACATGCAAGGCTTTTGGGTATCGTTGCGCCAGATTGAGCGCACGCT # Right flank : TTCCCCACCCTCACAGGCTCCCGAACAGGAGCCTTTTTTGTTGCCAGCCCGCCGCGTGCGGGCTTTTTGCATGGGCAACGCACGCGCCACAAGGGCACCCCCACAGAACGCACGCCTTCGGCGGTGTTTGAGGGGCTTTGTTTTCACCCCCGGGGCGAGTACAATAGGCGTGGTGTCAAGGAGAGGAGACGATGGCGCGACGCAAGCAGGAGATTCCAGCCCATATCAAGCCGCAGTTAGACGCCCTGCCGAAACGCCCCGGCGTTTACCTCATGAAGAACCGCGCCGGCGAGATTCTCTATGTCGGCAAGGCGAAGAACCTGCGCAACCGTGTGCGCTCCTATTGGAGCGCCGCCAGCCAGCGCGTGCCCAAAATCCGCCGCCTGACCAGCCAGGTGGAAACCATTGAAACCTGGATTACCGACAGCGAACTTGAAGCGCTCTTGCTGGAAAACACGCTCATCAAGCAACACCAGCCGCGCTACAATGTGCGCCTGAAA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAGCCGTATTCGATCCGCAGGGGATACTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.70,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 1219-354 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBZA01000222.1 Ardenticatena maritima strain 110S, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 1218 37 100.0 37 ..................................... CAACAAACATAATCCGCCTCCTACAAAAGAGTCGTCT 1144 37 100.0 38 ..................................... ACGTAGTCTTCCCGTTGATTGGATTCAAGTAAAAGGGA 1069 37 100.0 36 ..................................... CGTACGCAACGCTTGAAACGTACGCTCGAATTGTCG 996 37 100.0 39 ..................................... GTATTCCACGACCTTCCCAAGGTCGCCTTTCTCTTCAAG 920 37 100.0 37 ..................................... TCTGTCCACGATGAATATCCCAATCAATCTGGTTGCC 846 37 100.0 38 ..................................... CGTCACGAGCACTGTCGACGTGTTTGCGCCGTCTCCTA 771 37 100.0 38 ..................................... AGACTTTACCCCAAGCGCCTTCAGGCGCACATCGCTCA 696 37 100.0 39 ..................................... ACAGGATACTTTTTGCCGTTGACGGCTTCTAAGATCTTG 620 37 100.0 38 ..................................... TCGAAAGTGGCTATCCACGGACGTGGGTGGTATTCATG 545 37 100.0 41 ..................................... CGACCTCAAAATATCGCACGCCTACGTCCACATAGGCGCGA 467 37 97.3 40 ..........................A.......... AGCATGAACGCAGTGGACGTTTTGCCGCCGCCAAACCTTC 390 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 12 37 99.8 38 GTCTGAAAAGCCCTAATCCCCGCAAGGGGATTGAAAC # Left flank : CTGTGCCACAGATGAAGCGGACAAGCGGGCGACGCCCATAGCACATCCGTAC # Right flank : CGCAGGAGAAGATGACCGGGGCTTTGACCCCGGTTTTTTCATGCCTTTCGGCTTTCTGCGCCTCTGTTCAGCCGCTGTGGACACCCCGCCACACGCTGAGCCGCGAAGGGGGAAACGAGCGGAGAGAAAGCACGCGGTAAGAAGTGTTTGCCCTGCGGCGTCTCTACACTAGAATACTTCCGCCAACCTGCAAAAACGAAAAGGACTGTTTATGGCCAGAAAAATTGTTGTTCTGGCGCTTGCCTTGCTTCTTGCGGCCTGCGGCGGTACAAGCACCGCCCCCGCGCCCGAAGAACGCAGCGCCGACGCCACCCACACCCGCGAACCGACAGCGGCCGCATCCGCATCACCCAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAAAGCCCTAATCCCCGCAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.40,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : NA // Array 1 11754-11265 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBZA01000235.1 Ardenticatena maritima strain 110S, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 11753 37 100.0 39 ..................................... CCAAAAACTTCTATTTCCGACAATCTCAACATATAATAC 11677 37 100.0 36 ..................................... CTACGCTCAATAAGGTAAAGCAATGCGCGGTAGTCA 11604 37 100.0 38 ..................................... TGTAAATCATAACGACTCGCCCGCATTTATAACATTGA 11529 37 100.0 41 ..................................... GTTTATAAGACCGTTGCTCTCACCTTCTGAGCTACCCCCAC 11451 37 100.0 38 ..................................... GCATAACCACACATCCGGGAGGATGTGTGGACCCCCGC 11376 37 94.6 38 .........A.........................G. CCCAGAACGACGCCTAGAGCGATAATCCAATCGAACGC 11301 37 70.3 0 .AT........T.CC..............CG..TCGT | ========== ====== ====== ====== ===================================== ========================================= ================== 7 37 95.0 38 GTCTGAAAAGCCCTAATCCCCGCAAGGGGATTGAAAC # Left flank : ACTTCTTCCGCCGCCACCGCCTGCACCAGCCGCAAGACGTCGGCGGCGTCGGCTTCGCGCACGGTGCGCAAACGTGCGGTTTCTCCTGTTTTGAGTGTGACCAGGCGGGGGAAGATGGTCGTCGCCATGGCGCTCAATCCTGCTCGGTTGGCTCTGGTGGTTGGTCGGGGGTATGATAGCAGGTGTGGGGGACGTGGCAACCAGGCGCACGCGCGGGGTTGCCCATTGGCGCGGAGTGCGGTATGCTCGGCACACGCTTTTGCCAGAGGCGAGAGCATATTTTGCCAAGCAAATAGTTGAACGTGATAAAGTTCTGTCAGCCCCCCCCCTGAAACGAGGCGATTTTGGGGCGATTTTGAGGGGGTCTGAAAACGTTCAACTTTCTGGAAAAAGAGGCGGCATTTGGCATGGTTTTGGGGGTTGACAAACGCGCCATTTTCCTGTATGCTGTGCCACAGATGAAGCAGACGAGCGGACGATGCCCATAGCACATCCGTACA # Right flank : TCTTGCACCGTCGCGTGAGTGTTCGCGCGCGGTGTGTGCGCCAAAGGCTCCCACGGGAGCCTTTTTTGTTGGGTGCACGGCGGAGCGTTGACAGTGCAGGCACAAGCGGTTATACTCCTGCCCAGCCAAGCCAAGAGTGAAAACGGCTGTGAACCGGAGGAGTAGGCGGCGACGGTCGCCAGAGAGGGGCGGTCATCGGCTGGAAGCCGCCCTCGACACGAACCGCCGAAGGTCGCCGGGGAGCCGCAACGGTGAAGCGCAGTAGCCGTTGCCGGGAGCGCCCGTTATCGCGCCACGAGCGCCGGCATCTTCTGCCGGAAGCAGGGTGGTACCGCGGAGGCAACGCCTTCGTCCCTGAGGGGGCGAAGGCGTTTTCACTTGTGGGGGAGCGTATGTTGCCACGCCCATTCTGGCAACGCCTGTACACAACCGACGAGCAAGAGGCGGAGCAAGCCGCCCAGCGGCTGGCGGCGCTCGCCCGCGCCCACGGCGCCCAGCGC # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:0, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAAAGCCCTAATCCCCGCAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.40,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : NA // Array 1 4004-1438 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBZA01000278.1 Ardenticatena maritima strain 110S, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 4003 30 100.0 38 .............................. GGGCAAACAGGGCAATGGGATGGCGTGGAGTGGACGGC 3935 30 100.0 37 .............................. GACACCTCCACGACCACATCTGTTTGAAGATTGGAAA 3868 30 100.0 37 .............................. GCAACAGGAACAATGGAGCGGTTGGGGAGAGGTGTAT 3801 30 100.0 35 .............................. AAGACATACTGGGACATCATCTTCCACCGGATCGG 3736 30 100.0 38 .............................. AAGACGGGATGCGCGTGCGCCGCGTCCAGGTGGCGCTG 3668 30 100.0 36 .............................. AAGGACAAACAATCGGCATTGCTGAGGCTGGGCGCA 3602 30 100.0 37 .............................. GGGCTGGTTTCGCTAGCAATCGGCGGGCTGCGAACGG 3535 30 100.0 36 .............................. TTGCTTCACTTTGGGCGCGCGAGGTGCGGCGTGTGC 3469 30 100.0 35 .............................. ACCACAAGCAGCGCCGTTGAGGTGCGATACAAACG 3404 30 100.0 35 .............................. CTCCTGTCTCTTGGCTTAGTAAGTATCCTACTCAT 3339 30 100.0 35 .............................. TGGCTTTGGTTTCCGGCTTTGCTCCTGGTAATTGT 3274 30 100.0 39 .............................. TCAAGAGCCAAAAAGGATTGCGAAGCCACAAAATCAACC 3205 30 100.0 35 .............................. GAAAAGGTAAAATGGGTGGTCAATCGAGAGGAAAA 3140 30 100.0 35 .............................. TCGAGAACCCCAACATGGTGTCAGCAAATGAGTTT 3075 30 100.0 35 .............................. GAGCAAAACATACACGATTACAGTAGTGGCGCGTG 3010 30 100.0 40 .............................. ATAACCTGATGGTGGCGATACCGCAAGAACGTTGAGGAAA 2940 30 100.0 37 .............................. ATGCGTTGCAACGCGCATTGTGGCCGTCAGCGTTGAA 2873 30 100.0 35 .............................. CCGATACGCCTCAGCAAGGGCGACAATAGCATCAT 2808 30 100.0 37 .............................. CTCGACCAAAACATGTTCATTGACGCGCTTATGCATT 2741 30 100.0 37 .............................. GTCGGAATCAAATTCGTCGAGACCGTCTTCGAGCATG 2674 30 100.0 36 .............................. CGCTCATACGGCAGCGTCTCAACGACCTGTATGACC 2608 30 100.0 36 .............................. TACCACGCGGCAAAAGGTGGCACGTATTCGACCAAC 2542 30 100.0 37 .............................. AAATCGGAACACTCGCGCCGTCCAACGGATAGTTTGA 2475 30 100.0 38 .............................. GTGTTGACGTGATGCCGTGGCTTCAAGGGATTGTGGGG 2407 30 100.0 37 .............................. AGGCGCGTAAAAGCCCTCTTTTGGCGCTTGCTTCCAC 2340 30 100.0 40 .............................. GTCGCCCGCCGAATGGGCGCGCGAGTTGGAAAAGGGTGGC 2270 30 100.0 37 .............................. CCTGACAGCACAAAGACAAGCCATGCGCGTCGCGACG 2203 30 100.0 37 .............................. TATGAGGAATGGCGCTGGTTGGTCGCCGACGTATCGC 2136 30 100.0 37 .............................. CCGTGAAAATGAAGCCGAATTCACTACAATGGTTCAC 2069 30 100.0 35 .............................. CAAATACGCCGTGGCACCAGCCACAATGGTGAATG 2004 30 100.0 36 .............................. GGGCTGAGCGAAGTGCTGACGGTGGACAAAATGGGC 1938 30 100.0 40 .............................. CCGCGCGTATCGCGCGCGCAGCAGGGAAGGTTTCCCTCGC 1868 30 100.0 35 .............................. TTTTCGTTCCGCGCTTTCTTCTCCTTGACATTTTC 1803 30 100.0 38 .............................. CGCGCCCAACACCACACGCACGCCGGCCGCGCGGCCGG 1735 30 100.0 36 .............................. ACCACACACGCCGCGGTCGAGCATCGAGGTTGTAAA 1669 30 100.0 36 .............................. TCTGGCTCCGATGGTGAAAACTGAATGAGGAGGGAC 1603 30 100.0 36 .............................. CCCAGCCGGCTCTGTTTCTTCGTGGCGAAAATTCTT 1537 30 100.0 40 .............................. TAACCAGTCGAAATGCTGGAGGGACGCTAGCGTGAGGAAC 1467 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 39 30 100.0 37 GTTTTTAGCCTACCTATGAGGGATTGAAAC # Left flank : AGAGGATTACACAAAATTGGAAGGAGTGCCTTTGGCAATGCCGATCTCCTCTCGGCGAACATCTTTGGGAGAGCGTATTGTATAAAAGAGCACGCTATCTTCATCTTCCTCAATCACCTGTCGGATTTCAGATTTCAGGCGTTTGAATTGCGCATTGGTGAGCGAGCCTTCCATAACGGAGTTTTGCACCCACGTTAAATATCGTCGGCCAATGTGAAGCACTTTTGAGACACGTTGGACGTTGACATCATAAACCATGATCACATACATTTTTGGCTTTCCCCCTTATGGTCGAAGTCGCTAAAGGATAGATTGGAGACATTTTCACGGAGTTGGTTGGATACAGGGATGTCGTCGAAGTGAAATAGTGCTTGAAGCCTATGAGATAGACGACATGAAGAGTGTAGAAAAAAGGCTTTGGAATGCAAATTTATTTGACAAAAACATTTTTCTCAAGTATTTTGCCTCTCGAGCGGCATGTCAAATCTACGCAAATTTTG # Right flank : GTCTCTCTCTACCACCAACACCTAGCACCGCCGGCGCAGGGGCGTGAGTATGGGTATGTTGACACGGAGACGCTCATGCGCGGGCGGATTTGTGTAAAATGGTGCAATGATACAATCTTCCATGTGTTTGTCCCGTTTATTACCAACCCATAACAAAGGAGGCTCTCTGTGAAACGTCGTATCTTGTTCGCAATTTTTGTATTGGGATGCGCCTTCGTCCTTACACGAGGCGCCTTGGCGGGCGGGGGTGCGGGGAAGACGTTGTATCTTCCGCTGATCGCAGCGCCTCAACCGTTGGAGTACATCATATCAGGGGATGATGCCATTGCAGGAAGTCACTATCAAGAGGGGCGTACAAAAGAAGAAGCAATAAATCCACCATTCCATAACTATAATATCCCTTGGGCAACGGACACTGGCTTTGCTGGCATTGAGATGTTCTACTTCCCAGATCCTCTTTATGAATTTTACCGCTCGTTTTTAGAGGTAAGTCTCCCCGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGCCTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 4541-4870 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBZA01000044.1 Ardenticatena maritima strain 110S, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 4541 37 100.0 36 ..................................... TGGGTATGAGGACCCGGGGGATTGGCTTCCTACCAC 4614 37 100.0 36 ..................................... CCTCGCGCACGAATTCGATATCACCTTCCGCCAGGC 4687 37 100.0 35 ..................................... CAGTGCGCTGAGCCACAGAGTCTAGGCTCAGCGCG 4759 37 100.0 36 ..................................... GGAAAGCCAGTTTCGCGCGGCATGATTTGAAACGCA 4832 37 89.2 0 .............................G....CGT | GC [4861] ========== ====== ====== ====== ===================================== ==================================== ================== 5 37 97.8 36 CTTTCAGCCGTATTCGATCCGCAGGGGATATTGAAAC # Left flank : GGGGCGCTGTGCAGGTCAGCGTGCCTTTCTCGCCCACGCTCGCCGCTGGGCGGGCGGCGGCGTTCTTGCGGGTGGCAACGGGCGAGGGGGTGGAACGCACGTGGCCTGTGCGGCTGGATGCGTGGTGGCGTCAATTTGCGCCGCTGGTGGGGCGCGGCAAATGAGGCGGTGCGTGGAGGTGTGTGCAACCCGCGTTCTGGTGGGCGCTTTCGCAACCTGACGCTCGTTTGGTCAATCACCAAAGGTTGATGTTGCAAACAATGCAGGTTTGGTGAGATTTCGTGTGCAGATTTGCGCATACTTTGTGTGACAAAATAATTCGCAACCCGACGGGGGTTTTTGCCCCACAGGTGGGTTGCGAAATGCTTTGTGTGCCAAAGGAATTTTGCGGATACAACAAGGTGTTTTGCGCATGTGGCGAGCCACTGAGAGGCGCTGTGCGCGGCGATTTGACAGATTCAAGGCTTTTTGGTATTGTTACACCAGATTGAGCGCACGCT # Right flank : TTGTAGCCCGCATAACGCGGGCTTTTTTCTTTTGATGCGCAAGCCGCCGCCATACAAAAAAGCGCCCCACCAGAACGGTGGGGCGCTTTGCGTTGGGCGCGCTTATGGGGCTTGGCGGAAGAGGAGCGGCAGGAAGAGCCGGTACGCGCGTGTTGTGAATGTCCAGATGGTGGGCACTTGTTGCACGTCGCCCCCCGCGTCCACCTGGCCGGCGACGGTGACCGTGTAGGGCGTGCCGCCTTGCAGGCGCATGCTGGGCGTGAAGATGACCGTGTTGGTCGCGGCGTCGAGTGTGGCTGTGCCGCTGACCACGCCGCCCGGTCCTTCCAGCGTCAGCGCGAGGGTGTCGCTCACAATCGCCTGGTTCCACTGGACGCGGATGGTGGTTGTGACGGGCACGTCCACGGCGTTGGCTGCCGGTTCGTGCGCCACCACCAGCGGGTCGCGCCAGTTGGCGACGCTGGCGGTGACCGTCATCTCGCCGGTGCTCCCGTAGGCGA # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:0, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAGCCGTATTCGATCCGCAGGGGATATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.10,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 16387-15076 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBZA01000275.1 Ardenticatena maritima strain 110S, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 16386 37 100.0 38 ..................................... CCCTTCACCCGCGGCCTTTCTGTTAGCCTTCGCAAAAT 16311 37 100.0 37 ..................................... ACCTACGACAAGCCAGTATGCGCTGCCGTCTTTCAAG 16237 37 100.0 36 ..................................... CCAACTAGTGGGGGCTTTGCGCGTTGACAAGGTAAA 16164 37 100.0 37 ..................................... CGAATGTTCAGCCGAACGATAGTGTCTTCATCGCGGC 16090 37 97.3 38 ........................G............ TTGACAACGTCGAGATAGACGAATAGCGCCCATTTAGG 16015 37 100.0 38 ..................................... TTGACAACGTCGAGATAGACGAATAGCGCCCATTTAGG 15940 37 100.0 38 ..................................... CGTATCACCGGCGGCGTGAACGTCGCCACCGGCTCGTC 15865 37 100.0 41 ..................................... ACTTCAATGTAGGCCTTTTCGTCAATCTCAAACAAACGATT 15787 37 100.0 37 ..................................... ACTAGAATGGGTAAAGTTTGCCATTCTTCGGGACTGA 15713 37 100.0 38 ..................................... GTGATAAAATAGCGGCACATAGTTTTCTCCTTTTTTGT 15638 37 100.0 38 ..................................... ACACCGTATTCGCCAAGCGGCTCTTCTGCTTCCAAAAC 15563 37 100.0 37 ..................................... ATTTTCATCCCGCACATCTTACAGAAATTACGCATGA 15489 37 100.0 37 ..................................... TTGCCGCAATCATTGCAAAAGTTTCTCATACCGCTTC 15415 37 100.0 39 ..................................... CAAATGTGGCGGCGGAGTAGCCTACCATCATCAGAAAAA 15339 37 100.0 40 ..................................... ATTAAGAGATACTTATGGTAAACCCCACAACTCAAAATAC 15262 37 100.0 38 ..................................... GGAACTCTTCCCCAATAGTTCCTGCCAAAACCCCTTTG 15187 37 100.0 38 ..................................... CGGATACGGGCTTGCCCAACACAAGCACCATCACCCAA 15112 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 18 37 99.8 38 GTCTGAAAAGCCCTAATCCCCGCAAGGGGATTGAAAC # Left flank : TCATTTTT # Right flank : GCAGGAGAAGATGACCGGGGCTTTGACCCCGGTTTTTTCATGCCTTTCGGCTTTCTGCGCCTCTGCTCAGCCGCTGTGGACACCCCGCCACACGCTGAGCCGCAAATGTGGAAAGAAGAGGAGTACGACTTGAAGGAGCGTTGTGCGTGGCTACGTCATCGCGCGCGAGGGCTTGCGGAACCCCAGCCCCACCACTTCGCTGACATCTTGCACAATGACAAAGGCGTGTGGGTCGCGTGCATAGACCAGTCGCTTGAGTTTCTCAACCTGTCGGGGGGAGACCGCCACCAACAACACATCGCGGCGTTGCCCCGTGTACATGCCGCGCCCTTCAATCCGCGTCACGCCGCGCGGCAGTTCGCGTAAAATGGCGTCCGCAATCTCATCGCCATGCGTGGTAATCACGTACACCAGGCGGTCGTCCAGGCGCAGGACGTGCAACGCGCGTTGTCGGCTTGTTATGTCAACAAGATAGTGTAGCATCTCGCGCGGAGAAGGCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAAAGCCCTAATCCCCGCAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.40,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,5.24 Confidence: HIGH] # Array family : NA // Array 1 2941-4799 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBZA01000048.1 Ardenticatena maritima strain 110S, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 2941 37 100.0 36 ..................................... CATCGCGAAACTCACCGGGGTTGAGAGCCTCAGCAG 3014 37 100.0 35 ..................................... TCACAAGCCTACCCACCGGAGCATCAGAGAAATTG 3086 37 100.0 34 ..................................... TTTGTGGATGTCTCGGCTTTCTTTGGTCTGATTG 3157 37 100.0 35 ..................................... TGGCCAGTGAAGTGGGGAAGTGAGAAGAACGCGCG 3229 37 100.0 38 ..................................... GCGGTTTCTGCACGCTCGAAGCGTCGCAAAGCGCGCAC 3304 37 100.0 36 ..................................... TTCCCGTCTTGCGCCGATTGCGCAGGTGCTCCGGGC 3377 37 100.0 36 ..................................... CGGCGCCGCCCACAATTCAAAATCGCGAAGACGCCG 3450 37 100.0 36 ..................................... GAGTACCCGTGGCGGCTGGTCACTGGCACGTATCGA 3523 37 100.0 37 ..................................... ATCCTCCTTGAGCCTCGGTATAGATTTTTTCACACCA 3597 37 100.0 35 ..................................... CTTCCTCTCGGTGTCGCCTTCGCGTGTATGATAAG 3669 37 100.0 36 ..................................... GTGTCGGCGCCGTACCGGCCGAAGCGATGCGACGGC 3742 37 100.0 35 ..................................... ATCGCGGCGCATCAAAGGCGCTCGTCGAAGGTGTG 3814 37 100.0 36 ..................................... CTCGAAATCCTCAACAGTACGGAAGCCAAAGCAGAA 3887 37 100.0 35 ..................................... TTCCACTTTGCAGTTCTTGAACGTCATTGCATTGC 3959 37 100.0 36 ..................................... CAACCGGCGAAAAGTGGCATGATGTGGATATGCATT 4032 37 100.0 36 ..................................... CCAAAGAGGCCAACAATCCGAGCCATCAGGAACGAA 4105 37 100.0 37 ..................................... CCGAAAACGCCGCAAAAAGAACCGAACCGCACCAAGA 4179 37 100.0 36 ..................................... TTTCCATATCTCGCGGGTGAGGATGAGGGTTCTTTT 4252 37 100.0 36 ..................................... TGATGAAGCGACTTCTCCTGGAGGCCATCCAGGTGA 4325 37 100.0 37 ..................................... TTGAGAGAAGCAATAGCAAGATAGCGCAGAGCAGGAA 4399 37 100.0 37 ..................................... CATGGCCTACCTCACCGCTTCCACAAACGCCGCCACG 4473 37 100.0 36 ..................................... CATCATGTATCCGCTCGGCGGTGGTGGGATAGTCCC 4546 37 100.0 34 ..................................... TTCTGGGCGAGGACCCGTCCATCGTGCATGTGAA 4617 37 100.0 35 ..................................... AAAAGCCGTAGGATGAGAAAAACAGACCGCATGAA 4689 37 100.0 37 ..................................... GAATGGTGTTTATGTTTCGCTTGGTACTGGTTCTGAT 4763 37 83.8 0 ...............................CACTCG | ========== ====== ====== ====== ===================================== ====================================== ================== 26 37 99.4 36 CTTTCAGCCGTATTCGATCCGCAGGGGATACTGAAAC # Left flank : CCGATGATGTGATGCCCCAGGCAGGCGTGCAGGTAGCGCGCCTGCGTTCCCTTGCCGCTGCCGGGCGGTCCGATGAGGACGATATGTTGGCACATGTGGGTATCTCGCTGGTCGGTTGGTTTCGGTGGGGACATTCTGGGGGAAAAGCGGCAAATGTTCAAGCCGCAGAGCGCAGGCGCGGCGTCAGAAGGGGTGCAGAGGGGGGTGTTTCGCAACCTAACGGGTGTTTGGTTGCGTTGGTGGGGTTGATTTTGCAAACAATGCAAGTTTGCTGAGGTTTGGTGCATAGATTTGCACATACTTTGTGCAACAAAATAATTCGCAACCCGGCGGGGGTTTTTGCCACGCGGGTGGGTTGCGAAATGCTTTGTGTGTCAAAGGAATTTTGCGAATAAAACAAGGTGTTTTGCGCGTGTGGCGAGCCACTGAGAGGCGCGCTGCGCGGCGATTTGACACGTTCAAGGCTTTTTGGTATCGTTACGCCAGATTGAGCGCACGCT # Right flank : GCCGCCCATTTTCTCATTGCCCGCATAACGCGGGCTTTTTTTTGTTTGGCGTGGGGTGGGGTGGTGCAACAAAAAAAGCCCCTGTGCGGGGCTTGGTGGCATGGGGCGCGGGCTAGACCATAGGCCAGGGAATGTGTCGCCCAGGACCGGGCAGGGGATAGCGTTTGTGGTCGAGCAGGGTTTGGGCGCGTTGGCGCAGGGCGGCAATTTCTGCGGCGCTCAGGTAGGGGCGCAGGGCTTGCGCGAGGTCGCCCTGGGGGTGCAGGCGGGGCACAAGCGCTTCGATGGCGTGCAGGATGTCGTCGGGGATGGGTTCTCCCGCCAACTCCCAGAGCACCGTGCGCAATTTGGGTTCCACATGAAAACAGATGCCGTGGTCAATGCACCAGAAGCGCCCTTCCGTGTCGCGCAGGATGTGCCCGGCTTTGCGGTCGGCGTTGTTGGCGAGCACGTCGAAGGCGACGATGTAGGGCAGGACGGGGGCGGCTTCCTCGCGAAAG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAGCCGTATTCGATCCGCAGGGGATACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.70,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 5578-4711 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBZA01000088.1 Ardenticatena maritima strain 110S, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 5577 37 100.0 41 ..................................... GGACGTAAACTTTGATTCCACCCTCCTCGACGGCTTTCATG 5499 37 100.0 37 ..................................... AGAGCACAATTACGCAATGTGTGCTTGCGGGCGATAC 5425 37 100.0 37 ..................................... TCTTGCATCTCTTTTACCATACTCACAACGTCCGAAC 5351 37 100.0 39 ..................................... AAAGCACGGGATAACTCCGCCAATCACAGCACACATAGA 5275 37 100.0 37 ..................................... GGCAATGTATAATGCTTATGGCTGGCAACGCCGCAAC 5201 37 100.0 40 ..................................... TCTATTGTTTTCTATAATCCCCCGACTAAGACTATATAAA 5124 37 100.0 38 ..................................... ATATTTTCTGAATCTGAATTCATTTCACTTGTGATGTC 5049 37 100.0 38 ..................................... GTCAAGGAACTTTTCCCAATTAGTGGCGACTTCTTCAT 4974 37 100.0 38 ..................................... ACTTTGGCCCGCGCTGGTATCGTGCGGATGGAAGCATC 4899 37 100.0 39 ..................................... TAATACTTATTAGAGACCTTCCAACCCGCTTCTTCATAG 4823 37 100.0 39 ..................................... CAAATCACCTCGTGAAGTTCACCTTCGTGTGTTTCCACC 4747 37 94.6 0 ..................................CG. | ========== ====== ====== ====== ===================================== ========================================= ================== 12 37 99.5 39 GTCTGAAAAGCCCTAATCCCCGCAAGGGGATTGAAAC # Left flank : GTTGTTGTCAGTTACGACATCCCGGACGACCGGCGGCGGCTCAAAATTGCGCAAACCTTGTTGGATTATGGGGGCGAGCGCGTGCAATACTCGGTCTTTGAAATGCACATCACCGCCCGCCATTTGGAGCGCCTGCAACGCGAACTCTCCGCCATCATTGACCCCGGCGAGGATAGCGTGCGGTTCTATCGGCTGTGCGGCGCTTGCCAGGGCACAATTCTCTACCTGGGCGTCGCCCGCCCCACAGACGGACCGGGGCTTTTGATTATTTAGCAACGCAATTAGCCAGGCAAATAGTTGAACGCGACCAAATTCTGTCAGACCCCCCTGAAACGGGGCGATTTTTGGGGCGATTTTGAGGGGGTCTGAAAACGTTCAACTTCCTGGAAAAAGGAGCGGTATTTGGCATGGTTTTGGGGGTTGACAAACGCGCCATTTTCTTGTATGCTGTGCCACAGATGAAGCGGATGAGCGGGCGACGCCCATAGCACATCCGTACA # Right flank : TCACAGCGAGGTGTCCATTGACGCCTCGCTCTTTCTTTTGCCCCTTGCTTGACCGTTTGGCATCTCCGCAATTTTTCGTATTCTCTGCGCCGCACGCATCAACAATCTTGGGCACACAACGAACGGCACGCTATGGCATCTCATCCACCCGACCAGAGCATGGGCAAAACGGCAATTCGCGGCTCCATCTACAGCATCGCCGCATCCGCCGTCACCATCCTGCTGGGCTTCGCGCGTGCCGTTTTGCTCGCCCGCTTGCTCTTGCCCGAGCACTTTGGCGTCGCCACACTGGCGCTCTTTTTCCTCAACCTGAGCACAACCCTCACCGCCTTGGGGCTTGATAGCGCCATCATCCACCGCCAGGACGCCGACGACGCCTGGCTTGACACCTACTTCACCCTGCGCCTGCTCGCCAACCTCATCCCGTTGGGCGCGCTCGCCCTGCTGACGCCGCTCATCGCCCGCGCTTATCCCGCCATGCCTGCGCTCGCCCCCGTGTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAAAGCCCTAATCCCCGCAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.40,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : NA //