Array 1 30599-33011 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABEVO010000012.1 Tetragenococcus halophilus strain KG12 NODE_12_length_81325_cov_472.014031, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 30599 28 96.4 33 .A.......................... ATTCAAAAGTTTTGTTAAATGGATTGTATGGCA 30660 28 100.0 33 ............................ TCTTCTTGACCATATTACTTTTAGGCGAAATCA 30721 28 100.0 33 ............................ TTAAAATTGACACGCGCAGGTGCAGTGCCGTTA 30782 28 100.0 33 ............................ TTTTATCAGTCTATTTACTTGTGCAATCAGCTG 30843 28 100.0 33 ............................ TTGAAGTTTGCACCAATTACGAGTTGATCGTCA 30904 28 100.0 34 ............................ TTGCATGTATTTAACTTATGATGAATATGTAGAG 30966 28 100.0 33 ............................ AATTGTTCCATCTTCATTTACAATCTTGTTATA 31027 28 100.0 33 ............................ TTGGATAGCCGGACAGGCACACGCTTCAAATTA 31088 28 100.0 33 ............................ GTTTGGCAAAGGTCATGATCGGAGGTTTACGTA 31149 28 100.0 33 ............................ TGATTGTTTGTGGTTTGTCTAATTTATTCATTA 31210 28 100.0 33 ............................ GACCAGCCAAAGCAATAAGTTCCTTTATTGTGG 31271 28 100.0 33 ............................ TCTGACTTCATGGAGGCGATGAGCTGGGCTTTA 31332 28 100.0 33 ............................ CCATACAGATTAGACTATATCTTCGCTATTTAA 31393 28 100.0 33 ............................ AAGAAACAGATTGTCTTTTTGAGCAAAAAGCCA 31454 28 100.0 33 ............................ GGAGGTTCAACGACTATCGAAAAAGTGATATAA 31515 28 100.0 33 ............................ TGTTTCGAGTAAGTTAAGTTCACATATTCCTTA 31576 28 100.0 33 ............................ GCATTTTGTAGGCTTCCGCTTTGTATTCGCTAA 31637 28 100.0 33 ............................ CTCCTACACCCAAAGCTTTCGCTATCTTATCAA 31698 28 100.0 33 ............................ CTATTACTGCTATTGCTGCTAGATTGACTACTG 31759 28 100.0 33 ............................ AACAAAAAAATCGCACAATTCAAGATGACTTTA 31820 28 100.0 33 ............................ TTGAAGCTAAACAAAATGGCTTAACCCGCACGA 31881 28 100.0 33 ............................ TTAAAGAGCTTGTCTTTTAGCCTTTCCCACTCG 31942 28 100.0 33 ............................ TTGAGCGATTTTATTCAAAAGGACTATGACAAA 32003 28 100.0 35 ............................ CTAAAAATTCGAAGGAGTGATTACTATGCCAACAA 32066 28 100.0 34 ............................ TTCGTATAAAGTTGCCAACTTATATCTCCTCCAA 32128 28 100.0 34 ............................ TCATTTATATTTTTATCAATGTAGTAATAACTCA 32190 28 100.0 33 ............................ GAGGTGAGTTAGTGGACTTAAATGAATACATTA 32251 28 100.0 33 ............................ ACTTTGATTTTTAGTTAGTTAGGAGGTGGTTCG 32312 28 100.0 33 ............................ CCTAAAAATGAAATACAAAAAAAGTATATCACA 32373 28 100.0 34 ............................ TCAACGGGTACTGCGATACTCCAAAGTCCCTTGG 32435 28 100.0 33 ............................ TGGTAAGTTTGCCGATGTACTAGCACAAACAAG 32496 28 100.0 33 ............................ CAAAACATGTCTAGCCGCACGCTTTCTTATACG 32557 28 100.0 33 ............................ GAATCTGGTATAAACAGTAAAAAAGCCGCTCAA 32618 28 100.0 33 ............................ TACCCGGTGAATCGGATAGTATATGGACACGTA 32679 28 100.0 33 ............................ CTATTTTTTGGAAAATGTCTAGTTCCGCGGCCG 32740 28 100.0 33 ............................ GTAGTTGCTGAATCGGTTGCTAAAACGATACCA 32801 28 100.0 33 ............................ AGGTTACTTTTTGTTGTTTCCGTCTTGGGTTCA 32862 28 100.0 33 ............................ CTTATCTTGATGGTGTAACTGACGGCGACACTA 32923 28 100.0 33 ............................ TCAATTGATAAAAGTGATTTAGAGTTTCAGTCA 32984 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ =================================== ================== 40 28 99.9 33 GGATCACCCCCGCTTATGCGGGAAAGAC # Left flank : AAAAAACTTGGATTTGTTTCATTGCTGATAGTAAAAATAGACTAAATAATAGACACAAAAGCGCCAAAACGTTATTCAGAAATGATAGGTTTACCTACTAAAAAGATGACGCTTTTTTCCACTTCATTATAGTCGTTGTGTAAAATGATAATATCGTTTTTGCAGTTTTTTATTACCACTAGTCCTCATTATCCAACCATTTTTCTATTGATTCATCAGTTATATATTCCTTTAGTGACAATAATTCTTCATTCCTTACTATATTATTTTTTATTCTTTCCCTCTCTTGTTCTGACAAAGAAACATCAAATGGAATTTTCCCATCTGCAACAATACGTTTAAAATACATAGTTATTGCCGCTGTCGTTGTTAAACCTAGTTCATCTAAAATTTGGCCTACTTTATCAGTAACTTTTTTATCAATCTTAACCTGAACAGTTTTGTTATCTTTTACACTCATGATAAAACACCCCTATTAATAATATTATCATTTCATTTTA # Right flank : CAGTTAAAGATCCCTATAAAAACAGTATTTTTAATTCATTGCTTTTAAAAATTTATTCACTTTTGTCGATAATTGATATATGATTTTTGCATCTTCCAAAGCACGATGGGGTACGTAGTCATCAAAACCATAACTTATTAAAGCCGTTTTTAACTTATAATCAGTAAGCAACATTTTTTCTCGTTTAACATAACGAATTAGATCATGAGGTTTATTTGATAACTGGAATAGGTCAAAATCCTTCAAATACTTATTCAAAAAGCGAAGATCAAAATCAATACCATATCCAACTATAGGAAAATCTTCTATGAAATCAACAAACTCTACTAATGAATTCTTTAATGGTTGCCCGTTTTTGGCTAATAAATCTTGAGTAATACCAGTTAACTTAGTAATATCTGATGGTAATTCCTTATCATATTTAATTAATCGATGAAAATTTGTTAGTTCTCCTCCATCCATTTTGACCGCTCCGATTTCAATAATCTGATTATCATTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGATCACCCCCGCTTATGCGGGAAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.40,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA //