Array 1 1674635-1674003 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011361.2 Salimicrobium jeotgali strain MJ3 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 1674634 33 100.0 33 ................................. TATCTAGATACATATAGAAACAATAAGTTTTTA 1674568 33 100.0 34 ................................. CATATGAGCTTTTTACGCACTTTTCATAGAAAAA 1674501 33 97.0 34 ................................C ATTACGTGTTTATTCACTTTTTTGTGTGGTTACT 1674434 33 100.0 32 ................................. CTTGGAGCTCTGCTTTTTCTTTCTGCACCTGC 1674369 33 97.0 35 ................................G GGCCATTTGTCTGCACGTATTGGATGAATTGCTGT 1674301 33 97.0 36 ................................C AGACGTACCTGGAACAAGCCGCCACATCCGAGGTAG 1674232 33 97.0 32 ................................C TTGCAGCTGGATAGAGAATATCTGCAAAAGCT 1674167 33 100.0 33 ................................. TGTGTTTCTTCATTACCGTTACTGGCGTTTTTC 1674101 33 97.0 33 ................................A GTTCAATAGCTTCTAAGCGTTCCCTGCGACCTG 1674035 33 75.8 0 ....................T.AAG...GG.CC | ========== ====== ====== ====== ================================= ==================================== ================== 10 33 96.1 34 GTCGCACCCCACGCGGGTGCGTGGATTGAAATT # Left flank : TGAGAGGAGACATTGATGAGTACCCTCCTTTCCTTTGGAAGTAGGTGAATTATGCTAGTTTTAATTACTTATGATGTACAAACAAGTAGTGAAGGCGGGAGTAAGAGGTTAAGAAAAGTTGCGAAAACTTGTCAAAGTTACGGCCAACGTGTTCAACATTCTGTTTTCGAGTGTGTAATCGATTCATCTCAATTCGTAACTCTGAAGCATAAATTGAAAAACATCATAGATTTTGAAAAGGATAGTTTGAGGTTTTATCGTTTAGGAAATGAATACAAGGACAAAGTAGAACACGTTGGTGTAAAGGAATCACTAGATGTAGAAGACCCATTGATTTTTTGAGTGCGAACTCTAAGTAAACATAAAATTTCAGAGAGATTCGCACCAAATTAATAGTGAAATGTAGTGAAATTATCTTTGGCTCTTTAGAATCACTATTAGAATTTTCGTTTTTGGTTCATATATTGAGTGGTTTATCAATATGTTGTGCCAAAATCGCA # Right flank : GTTGACCTTGTTTATGATGTTTGGTTGAAAAAACCGGTGTGGATCCAAAAGCGTAATAACCTATGTAATCATCTCAATACAGTCAAGAGTAAAACGATTTTTTCTTTCAAATGCAGGGAAGTAACTATGTAGAACTTAATTTGAAAGGAGTTACTTATGAAAACAGCATTCATTGCAGACATTCACGGAAACGCTACAGCACTGCAAGCGGTACTGGACGATATAAAACGTCAGGGGGCAGACCGTGTAGTTATGCTCGGTGATCTCTGTTACCGGGGCCCGGAACCGAAGAAGTCGCTGGACCTTATACGAAATCTCGATGCTCCGGTCATCAAAGGTAATGCAGACGCCTGGATTACCCGCGGCGTGCGGGACGGAGAAGTGCCGGAGAAGAATATTAAAATGATGAGGGAAGAAAGAGAATGGGTGGCGGATAAGCTTACGGAAGAGGATATCTCCTATCTTAAAAACTTGCCGGAAAGTGTAACGGAAACAATCGG # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCACGCGGGTGCGTGGATTGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.90,-10.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //