Array 1 187714-187864 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP051144.1 Romboutsia sp. CE17 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ============================= ================== 187714 31 100.0 29 ............................... TACTAACGGTGAACCACCTGCTATACCTA 187774 31 96.8 29 .........................T..... CGCTAATGGCGAAGCACCTGCCATGCCTG 187834 31 93.5 0 ....G..G....................... | ========== ====== ====== ====== =============================== ============================= ================== 3 31 96.8 30 ATGGAGAAAATCCTGGAACACCACCAGATAA # Left flank : TATAGAATCTGTATTTGATGTTGATACTTTCCTTAAATCTATTGCCGTAAATACAGTAGTTGGTAATTATGATAGCTATAATGGTTCTAAAGCTCACAACTACTTTTTATTAGAAGAAGATGGAGTTTTCAAGTATATTCCTTGGGATTTTAATATGTCATTTGGTGGATTTTCAGAAGATAACGGTGCAAGTGTAACTGTATCAATTGATGAACCTCTATATAATGTAGACTCTTCAAAAAGACCTTTAATTGAGAAACTTCTAAGTGTTGATGAATATAAAGAAAAATATTATGGTTATTTAAAAGAGCTTGTAAATTATTTTGATGATTTTGAAACTCAAGTTAATGATCTTGCTACTTTAATTAAACCTTATGTTGAAAATGACCCAACAGCATTTTATACTATTGAACAGTTTGAAGAAAATATAGTTGCTAGTGATACTGATTTATCTACTGTTAAAAATAATATGAATGGTAATAAACCTGATAACGGTGATA # Right flank : ATGCTAATGGTGAAGCACCTACTATGCCGGATGGAATGGAAATGCCTAATAAGGGTGGAGGTATGAATTTATCTGGAGATGTTGTTTCTATTATGGATTATTTACAACAAAGAATTGAAAATATTAAGACTCAATTAAGTTAGATAATATTCGTTCTAACTACTTAAACTCACGAAAAAGGTACTGGCTATTTAATCAATATTTTTTTATATGTAAATATATAAATATGGTAATTATTAACAAAATATGTTGACAAGTAATTATTAAGTGAATAGAATTAAGGTATAAAATTTAATAAATCTTCAGGGCAGGGTGAAATTCCCTACCGGCGGTAAAGCCCGCGAGCCTTATGGCTGACTCGGTGAGATTCCGAGGCCGACAGTAAAGTCTGGATGGAAGAAGATAAAATTATAGAAATCTAAGTATACATGTACTAGTTTGTTTGTTAAGCTCTGAAATATTATATATTTCAGAGCTTTTTAGATTTTTTATATAATTTA # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGGAGAAAATCCTGGAACACCACCAGATAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.06%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 2 1128356-1134596 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP051144.1 Romboutsia sp. CE17 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 1128356 29 100.0 36 ............................. ATGATTTAGAGAATGAAGATTATTTTATTAATATTG 1128421 29 100.0 37 ............................. AGATTAAGGCAAGTTAAGTTTTTAAAAAGTGGATATA 1128487 29 100.0 37 ............................. TGTGATAATATTATGAACTATATACAAGAAAACTTTT 1128553 29 100.0 38 ............................. TCAGAATCATACCAAACGTTTATACAATCTTCTTCAAA 1128620 29 100.0 37 ............................. CCGATATATACATCTTGAACTTTATTCTTATTTTCAA 1128686 29 100.0 38 ............................. AGTTATAACACTTTAGCTAAAAGGATGAGAGTGTCAAA 1128753 29 100.0 38 ............................. TAACTTGCAACTTTACTCATAATGCTATGAAGCTTTTC 1128820 29 100.0 37 ............................. ATGTGTGGTAAAAAAATAGGGAAAATAGTAGATTAAA 1128886 29 100.0 37 ............................. CCTATAATATCACCTAAAGTTGTTTTAGGTTCTCCTA 1128952 29 100.0 37 ............................. GTATTTACTAGAAATATACCAGCTAATGAAACTGAAA 1129018 29 100.0 36 ............................. AATGATATTAATATATGTTTTAGGGTTATATATCCT 1129083 29 100.0 36 ............................. TTTTTAAACTTAGATTCTTTAATTCCTGTTAAGTGT 1129148 29 100.0 37 ............................. ATTTTAAGTTCTAAACTATATGGATTTTCTAATATTG 1129214 29 100.0 37 ............................. TATATTTTCATTGTAGCTTCTACACCTAACTCATCAA 1129280 29 100.0 37 ............................. TTTGCCAACCCGTTAATGCATAGCCATGTTCATTAAA 1129346 29 100.0 36 ............................. AGTAATTCTCTTAATTGTGGATTGTCAACTAATATT 1129411 29 100.0 38 ............................. TTTTCTTTTTCTGTGTTACTTTCAGTTCCAACGTCTTG 1129478 29 100.0 38 ............................. ATTATGTATATTTAAAATGTATTTTCTATGTTATCCTA 1129545 29 100.0 37 ............................. CAACTAGAAAAATATATTTATTTTCAAGAATACTTTT 1129611 29 100.0 37 ............................. CTTTTATTAAGAACATGAATATTAGTATTATCTCTAA 1129677 29 100.0 36 ............................. TAGCAACTATTTCAGTTTCATTTGCTGGTATATTTC 1129742 29 100.0 37 ............................. CTTTTATTAAAAGATACCTTTAATTGTCTTGATTCAT 1129808 29 100.0 36 ............................. TTTACTAGAAGCTTATTTATATAATCCGGTCTTGCA 1129873 29 100.0 37 ............................. AGTGAAATTGAAGAACTTATAGGTGGGTTCATTGATG 1129939 29 100.0 38 ............................. ATATCTAAAGATTTAGAATATAAATTAAAAACTTTAGC 1130006 29 100.0 37 ............................. AGATTTAATCAAATCTATATAATTCCCTCAATAATTC 1130072 29 100.0 38 ............................. AAATCTATTTCAAGGCAATTTCCAAGGTTGCTGGGAGA 1130139 29 100.0 36 ............................. TACGTATATATTACCAACTAACGCCTTTTTACCCAT 1130204 29 100.0 37 ............................. TACCTAATAAAATAATTTTAAAATTATCAAACTTATT 1130270 29 100.0 37 ............................. ATCGTATGTGATATATTCATTTTACATCTACCTATTA 1130336 29 100.0 38 ............................. TTATTATTACATCTTCAAAAGTATTAATATCTATATGA 1130403 29 100.0 37 ............................. TAAAAGTAAAACTTTATAGGACAACATAGAAAATTAA 1130469 29 100.0 37 ............................. GTTTATATGGCAAAACTGTAGTGATTTTCTTATAAAC 1130535 29 100.0 38 ............................. TTTAAAACCAAGTACTTGTAAAACGAGAGGGAGTTACA 1130602 29 100.0 37 ............................. TAGATAAAGTTATGACTAAGAAGGAAAATTGTACATA 1130668 29 100.0 38 ............................. TATATACTCGTACCATGAATACGAAGAATTAAGAACTG 1130735 29 100.0 37 ............................. CTAAATTAATTATGATGACATACTACGCATCTATCAT 1130801 29 100.0 37 ............................. GTAATTGATATATAATTATCTTAAAGGGGTGATTATA 1130867 29 100.0 36 ............................. ATTTACACAGCAAACTCTAAAATACCATGTTTCATC 1130932 29 100.0 37 ............................. TAGAAACACTTCTAGTAAGGTTTTAGCTATTAAGAAT 1130998 29 100.0 37 ............................. ATAAACAACGAATTATTAACTATTGATACAAATACTA 1131064 29 100.0 37 ............................. AATTTTGTAAGAGCCAACAGATTTAATAATGGTACTA 1131130 29 100.0 37 ............................. TTGTAGAAATCTCATAAGACTCCCATCCTTCATCATC 1131196 29 100.0 36 ............................. ATAAAATATAAATAAGTATTACTTAATAAGTCTTGT 1131261 29 100.0 37 ............................. TTCTATCAATCTATATATTAAATTACCCCATTTGTCA 1131327 29 100.0 36 ............................. TTTTTAGGTAGTCTATGAAAAGGGTTATCTATAAAA 1131392 29 100.0 38 ............................. TAAAATTTATTAAATTGTGCTAAAAACTTTATACTATA 1131459 29 100.0 39 ............................. TTTTTATACTTGTCTTTTTCCTTTGATATATCTTTGTAT 1131527 29 100.0 37 ............................. GTTGGTGTTACTAGCATTTTTTTATCATCAATTTCTC 1131593 29 100.0 37 ............................. CTTGCAAGTTCGTCTATAGCTTCAAGTATTTCATCAT 1131659 29 100.0 37 ............................. ATTTATTTCAAGATTATATCTGAAACCATAGGAAGCC 1131725 29 100.0 37 ............................. TAAATGAATGTAATAAGCACGAATTGCAACAAGATTA 1131791 29 100.0 36 ............................. TATTTTTTATTCTTCTGTTTTTATTTTGTATTTATT 1131856 29 100.0 37 ............................. ACTTTAGAGTATAAACTATATGGATTTTCTAATATTG 1131922 29 100.0 37 ............................. AGGATTGTAAAAAGTATTCTTGAAAATAAATATATTT 1131988 29 100.0 37 ............................. CCATTATTACTAGATACTGTAAGAGGTGATGATAAGA 1132054 29 100.0 37 ............................. TTTGAAGTTATTTATATAAAATTAATTCTTCTGCATA 1132120 29 100.0 38 ............................. ATAGATTATCAAATAATTCTGTAAGAGTAGTAAATTGT 1132187 29 100.0 37 ............................. CCTTATATCCCGTATTTTTTTCTGTTAAATTGCTTTA 1132253 29 100.0 37 ............................. AATAGCAACTTTTTATATGACATAGAAGGTTATCAAG 1132319 29 100.0 38 ............................. CGTTATTTGTATAAAGATAGTAAAGCTTTATTTACTCC 1132386 29 100.0 37 ............................. AAAATTATAGAAGGGTTAATAGTATTATTTATCCATA 1132452 29 100.0 39 ............................. ACAGTTACCGCACTACCTAGATACCCTGTAGCCTTACCA 1132520 29 100.0 37 ............................. TTTAGAGAAAATCAATCAGTATATATAAGGAGAATAA 1132586 29 100.0 38 ............................. TCCGTACTTGGGTTCTTAGAAAAAGATAAAATATATAC 1132653 29 100.0 35 ............................. TTTGAAAAAATGGGAGTTGAAGCTATGGCTACTCA 1132717 29 100.0 37 ............................. AGTGAGGTGATAACTCAATGATACCAAAATTGCATAC 1132783 29 100.0 37 ............................. AAGCATTTTCTTTTACTTCTTTATTTACTTTATCTTC 1132849 29 100.0 36 ............................. ACAGTTGAAAAAATAACTAAATTAGGAGAAAAATAT 1132914 29 100.0 38 ............................. GTAGCACTTCCAAACGGTAATACTAGGATGCACTTTAT 1132981 29 100.0 39 ............................. CAATGCAGGTGGAGGAGATAGAGGGGAATGTATACACTC 1133049 29 100.0 38 ............................. TAAACTTCTGTGTTAATTATTTTCATTTTAGCTATTCC 1133116 29 100.0 37 ............................. GGGATAGCACTAGCAAATAAGCTTAATAGCTTTTTAT 1133182 29 100.0 36 ............................. AGTACTTTCTTTAAATATACTATCTAGTAATATAAC 1133247 29 100.0 36 ............................. TCCAATTCATTCTATATTTATCATTCCAACTTCTTG 1133312 29 100.0 36 ............................. ATTTTTATAATATATTTTAACTGTTAAACAGTTTTA 1133377 29 100.0 37 ............................. TCTTTAGGATTGTAATATTTAGATACTTTTACATCTA 1133443 29 100.0 38 ............................. TCATTGATTATTACATAAGCTGGTATTCCACTTAACCC 1133510 29 100.0 37 ............................. AAAACATATATTAATATCATTAGGAGTCGATACAAGC 1133576 29 100.0 37 ............................. AGACAACATAAACAGTTAAGCTATATATTCCAGCTTA 1133642 29 100.0 38 ............................. GCAACTTTTGCAAATTGTTGAAGCTTCTCTCCGCCAGT 1133709 29 100.0 37 ............................. ACCAATTTAACAGAAGAAGATAGAGTACGAGTAATGA 1133775 29 100.0 37 ............................. CTCTCCCATTACTGAGAGTGTCGGACTATATCTTCAT 1133841 29 100.0 37 ............................. TATATTTGGATTATCTTTACTCATATACTTTTCTATT 1133907 29 100.0 38 ............................. ATTTAACACCTAATATGTGCATTAATATATAAGGCAAA 1133974 29 100.0 36 ............................. TTAAATATAAAAGACATGGTTTGACCATTAACACCT 1134039 29 100.0 37 ............................. AGCATGTATTTTTAGTTTATATGTAAACAATAGTAAT 1134105 29 100.0 37 ............................. TCAGTTTTTCAAGGACAAACTGTTTAACCTATTTACT 1134171 29 100.0 38 ............................. CCGATAGTTAAATTATCGGCACGCTTAGGGCTTAATGT 1134238 29 100.0 37 ............................. AATGATTATGAAGTTTATAACGAATTAATAAAAATGT 1134304 29 100.0 37 ............................. ATTGAATTATTAATAGAAGAAAATGAAATATTAAAGC 1134370 29 100.0 37 ............................. AGAGCAGAAACAAATAAAAATTGTCCTTATTCTTTTT 1134436 29 100.0 37 ............................. AGTAATGATGTAATAGACAATGTAGTTAAAGCAAATA 1134502 29 100.0 37 ............................. ATATGTGGAGGAACTACATATAAAATAAAAACTTGCA 1134568 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 95 29 100.0 37 GTTTTATATTAACTATGTGGTATGTAAAT # Left flank : AGCATTTTATAAAAGATGAAAAATATAAAGTATTAAAGGCATGGTGGTAGTATGTTTGTTATAATTACTTATGATATTGTGGAGGCTAAAGCTCTTAATAGATCAAGAAAGATTTTGAAAAAGTACTTAACATGGACACAAAATTCTGTATTTGAAGGTGAGATAACAGATAGTAAGCTACATAAATGTATTTCAGAAATAAGAAATGTTATAGATAAAAATGAAGATTCTATTTATGTTTATGAGATAAAGAATCCTAATAATGTAGAGAAAAAATCATACGGTGTTCATAAAAATTTTGATGAGATGTTTTTATAGTTTGCAGTGAGGTATATTTATGGTAATATTACTTGTAAGTGTTGTGAATAGTGAGTTATAAGTATATATTTTAAAATTTTATTTTTCTTTATATAAACTTCACTGCAAATCTAGAATAAAAACATATTATTTTGATTCTAGGAATAAGATATTTCAACATTTTGAAGAGATAATTTTTTGGG # Right flank : TTATTTAACATATAAATCTAGTAATATTGATACATTTGAGAATGTCTATAGATTTGTGTAAATAAGATTTTTTATAATTTATATTACTGGAAATTTCAAATTCCAGTAATATTTTTTTATTTTTGAGAAATACTAATACTGGAATTCTTTACACAATTATTATGTGTTTAATTTAGTTATTTATACACTAAATTTTCCATAATTTTAAAAAAAATTTATATTGTGTAAGAGTTAGGTATCCTTTCTCCAAACATAATTGTAAGCTGTCCTAAAGTAGACGCCCAATTTTGGTTTGGAGAGGTCCATTTCTCCATAATTTTCATGGTAGATAAATATAGTGATTTTCTTAGTGACTCATCTGTTGGAAATACAGTTCTTACCTTAGTATATTTTCTTAACTGTCTATTAAATCCCTCAAGAGCATTTGTAGTATAAATAATTCTTCTAATTTCATGTGGATATTCAAAATACGTATTCAGATTACTCCAGTTATTGTACCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 1136170-1136328 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP051144.1 Romboutsia sp. CE17 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 1136170 29 100.0 35 ............................. TGAGGTTTGCCATCTATTGTGAATTGTACTTTCAT 1136234 29 100.0 37 ............................. TCATCTAAACTCAATTCAACATATTCAAAATCTTTAC 1136300 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ===================================== ================== 3 29 98.9 36 GTTTTATATTAACTATGTGGTATGTAAAT # Left flank : TCTCTTACACTCATACCACAGGCATAAAGACCTATTATTTTTTTATCTAGTTCATTACATACAGTTTCATACTTTTTAACAACCTTCGGTTCAAATTGTGCTTTTCTATCTCTTGGTATATCTAGGCCAACTTCACCAAAACTACTTTCAATAGTCTTAGAACTATATCCATTCCTATAGTTTGGATTAGCTTCATTACTTCTTTCATGCCTTTCTCTTCCCAGATGTTCTTCCATTTCTGCTTCTAGCAATTGTTGGATAATATCTTTGAACAGCTTTTGCATTAATCCATTTTTACCAACTACATCTTCCATGGTTTTACATTTTCTTACTTCAGCTTGGTAGTCTAAATCTGGAATAATTATTTCTCTTTGATCTTTCATTTCTTTACCTCCAAAAGTTTAATATGAATATTATTCCAAACTTACCAATTTTACATTCAAAAAAGACTGTAGGTAAGTTTGTATTTACACAAAACTACCTACAGTCCCATACATTTA # Right flank : TTATAATCACTTAAATCAACTAAGAATTTATCCTAATTTAAAATAAAATTAGTATATCATATCTATAAAAATATTGAAAATCAAGCTCATACCCATTCACAACAGATTTTCTCATTAATCTCAGAAATAGCCATTCGAGAATAATCCATATCCACAAATTCCATATTTTTCATACTTATACTTTCATATACATGGTATCCAGCCTTACCTGATAAAAAATAAGGGGGGTCGTATTTTTTGATCTAGGGTATCTAAAATTTATTTCTATTAAAATATTGACTTAGAGTTAACTCTAAGTATTAAGATTAACTTGTAAACTATATAATACTAGATCATGAGAATATTGACAAACAGTACATTAAAATGAAAAAGGAATAACATAAGGAGGTAAATATATTGGAAAATAATTCAAACAACGGAGCAATATTTGAAATAGGTGATAAACTACCTGAAATGTTTAGCAAGTACTTTATTGGTCAAGCATACTTAAAAATGTTAAC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 4 1336425-1335663 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP051144.1 Romboutsia sp. CE17 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1336424 36 100.0 30 .................................... TAACTATATCTATTCTTGATTATGAATTAC 1336358 36 100.0 30 .................................... TTTAGTATAGATAATGAATCTATGACTGTA 1336292 36 100.0 30 .................................... AAATTCATTTAATTAATATAAAAGGAGATT 1336226 36 100.0 30 .................................... ATTCAAGCGGTAATATTAATGGAAGGGTTA 1336160 36 100.0 30 .................................... CTATGAAAACAGGAATGCCGTTTAGTCACG 1336094 36 100.0 30 .................................... GCGTTAAAGTATAATCCATTATAGTTTGGA 1336028 36 100.0 30 .................................... AAAGCTAAGCATAAAGAAAAAGAAGCAATA 1335962 36 100.0 30 .................................... TAGCGTTTTCAGTAAGTGAAGGGGTTTCTT 1335896 36 100.0 30 .................................... TTGGTCTTTTAAAATACCATAGGTACTATT 1335830 36 100.0 30 .................................... ATGGAGCAGCCGCAACAACTACTCCACTTA 1335764 36 100.0 30 .................................... TAGGTAATTTTATGATTCAGTTATATTTTG 1335698 36 91.7 0 ......................A..A.........A | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 99.3 30 GTTTTAGAGTTATGTTATTTTAGATGGTATTAAAAC # Left flank : CATGGAGAAGAAAACTTACTTATTAATTTAGAGAACATATTTAGAAACTTACATGAAACTTTATCTTTTTATGATTTTGAGTTAGAATATAAAAGAGAGATAAAGATATCAGAGCTACTCAAATGTATAGGACTTAAGTTTAATGAATATTACTATGATAATCCATTAGATAATTTAATTTGCTTATTTGATTTAGTATCATTATTTAAATTATATAAAGTTATAGCTTTAATCAATGTAAAATCATTTTTTAGTGATGAGGAAATAATAGAAATATATAAATCAGCATTACATAGAGATATAAAATTATTATTAATTGATTATAGTGATGAAAGTGAATTACTTGAATATGAGAGTAAACTATATATAGATACTGACTTTGATGAATTTGTATTAAAAAAATAAAAATATTGTCTATTATAGCAGGGATTTGTTATGTGTCTTTTCTATAAATCTAGTTTGATTGCATTATAAAATAAATTAATGTATATTAAGTTTGA # Right flank : TGTAAAAAATGATTATAAAGATCGTTATAATGTTTTATAATTCTATTAAAGATAGAAAATTAAATTTTAGTATAATAAGTAAAAATTTTTTGAAGATAAGGGAGTCATATTTACTGACTCCCTATTTCATACTTATTATATTTTGAGGTAATTCATCACTAACCAGATATTTTAGCATAGACTTATAAGCAGTTATAAGAATTACTACCGAGTAGATAATAAATTGTTTTGCAAATGATTATCTAATTATCTAGAGTAACTTAGTGTATACTTATCGTGTAGATTATAATATACATAGATCAATATGTGTAAAGTCACTGATAAATTAACTAATCAAATAAAGGGGGAAGAATATAATGAAGAAACTTATATGTATTTTAAATATCGCTTTATTAATGTTAACAATAACTGGATGTGCAGGAGCATCAGATTATGAAATAAAATTAATAAATGATTACCATGCTGTTAGAATGTCTGCTAATAATGTAAAGATATTCAAA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTTATGTTATTTTAGATGGTATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [85.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //