Array 1 3177-5650 **** Predicted by CRISPRDetect 2.4 *** >NZ_QCYH01000029.1 Pelagivirga sediminicola strain BH-SD19 BH19_scaffold29, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 3177 36 100.0 30 .................................... GACATTCACGGTAACGCTTTGGGTCGCGTC 3243 36 100.0 30 .................................... TTCCTGATTAAGCGTGCGCTTGCGTGTTTC 3309 36 100.0 30 .................................... AGCGGGTATGGCGGTAACCTCACTGCGGGT 3375 36 100.0 30 .................................... GATCAACGCAGCGCCCTTGTCAGGCGCCAA 3441 36 100.0 30 .................................... TGCCGTGGTGTTCAAAAAGACGGACGCCGA 3507 36 100.0 30 .................................... GGAGATGCTGGCAGCCGCAGGATCGCTCGA 3573 36 100.0 30 .................................... AAGGGCGAGGTTGTCTGGTTCACCAAGAGG 3639 36 100.0 30 .................................... CACGTCAGACTGTATCCACGTCCTAATGAT 3705 36 100.0 30 .................................... CGCGTGTCCGGTTTGGCCATGCTCATGCAT 3771 36 100.0 30 .................................... CGATCCTGAACATGAAATACTCCATCGGAA 3837 36 100.0 31 .................................... TGGCAAACGAGATTGCGGCGCGCATCCATCG 3904 36 100.0 29 .................................... TGGGCCTTGGGTTTATCCTGGTCGCCCTT 3969 36 100.0 30 .................................... CGGAATACACCGCGCAGGCGGTCGCGTGGG 4035 36 100.0 30 .................................... GTCGCGCGCACAGTGCAGGAGTATGAATGA 4101 36 100.0 30 .................................... CGGGGTGTCTCAGCCATGGTGGCCTCCTAG 4167 36 100.0 30 .................................... CCATCGGTCGCCCACCGCATGTTGGCACCA 4233 36 100.0 30 .................................... GACCGCGCGCAGCATGGCGACGCGCTTTTG 4299 36 100.0 30 .................................... CGGCGGCTTAGCCACCTCAACATCGGGTTG 4365 36 100.0 29 .................................... GGCTTTGGCGCAGGTCGGGGCTGAGACGT 4430 36 100.0 30 .................................... CCCGGCTGTTGGCGGATGCCAGTCGTCTTT 4496 36 100.0 30 .................................... CGGTCGATGTTCTTGAACCCCTTGATGAGT 4562 36 100.0 30 .................................... GCTGATTAGCAAGCCCACGCGTGACCAGCC 4628 36 100.0 29 .................................... TCGTGCCGCATCTGCCGGATACGCTGGCA 4693 36 100.0 30 .................................... CGGCATTGCCAGCAGCGTTTGCAGGGGACC 4759 36 100.0 30 .................................... TTTCCTCAACCGCTTGACGCATGATCGCTA 4825 36 100.0 29 .................................... GCATTGCGAATAGGTTCCCATCCAGTGGA 4890 36 100.0 30 .................................... CGCGCTGTCCGGCTTCCGTGACTTCAAGGA 4956 36 100.0 29 .................................... CCAATGATCTGGGAATGCTCCGAAAACTT 5021 36 100.0 30 .................................... GACCACTCCGACACGCCGTTTTTCAGCAAA 5087 36 100.0 30 .................................... CGCTCAAGGCGATGGAGCTGATCCCGGTCT 5153 36 100.0 30 .................................... AACACGTCCAACGTGGTTAATCTGGATGCG 5219 36 100.0 30 .................................... GCACCGCTGATTGCTTTGTCCTTTGCGCGC 5285 36 100.0 30 .................................... TGGGACGATGCAGTTTTGGAGGTTACCGGG 5351 36 100.0 30 .................................... GGATCAGGCGGAGGAATGGTGCGCGCGTCA 5417 36 100.0 30 .................................... TTCGGCGATGAGGACCATGGTATCCCCGGC 5483 36 100.0 30 .................................... TCGAGGCGATTCCGAACCGTACCCTCGACA 5549 36 100.0 30 .................................... GACGGCGCTGATGATTATTTGGGCATCTGT 5615 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 38 36 100.0 30 GTTGCGGCTGGACCGCGAATTTTGAACAGCTACAAT # Left flank : CTGGCATACACGCAAGGTGCTGGCGTGGCGCATCTCAAACACGCTGGAAGCCGGGTTCTGTGTCGACGCCCACAACGAAGCGATCCACAAATACGGCTTGCCGGAGATCATGAATACGGATCAGGGCAGCCAGTTCACATCGTTTGCGTGGACAGATCGGTTACGGCGATCTGGCGTGCGCATCTCGATGGACGGCAAAGGCCGCTTTCTCGACAACATCTTTGTCGAACGACTATGGCGATCCCTAAAATACGAATGCGTCTATTTGCACGCCTGGGAAACTGGATCAGAAGCCAAGGCTGGCGTCAAAAAATGGATCGAGTTCTACAATCACAAACGCCCACATTCTGCACTTGGCGGCATGCCACCTGCCGCGGTCTATTGGCAGACAAATGAAACAAACAACCCCGATCAGCAGGTGCAAAGAGTAGCTTAATTTATCTCAGATCTTGTCCAAGGAATGGGGAGTAGCTCACCGGGCCGCACCAAAGCCGATATGT # Right flank : TAGTGCGCCGGACAACGACTTGATGACAAAGGCATTTGTCCGGGGCATGTTGTCGGGTATCCAAGCGAATCGCATCAGAACATCACCAGTTGCTGTGGGTTTTCGCGCGCCTTTCGGCGGGCCTGGTCCGAGAAATGAACAATATCACGGTATTGCCGGTCCGTGAAGTTGAGGATCTGGACGTCGCCGGCGTCGGGAAGATGCCGCTCGATTCGGTTGACGCGGGTCGCAAACGCCTCCTTGCCGTTGACGAAACGCGCGTAGACCGAAAACTGGCTGCGCTCGAAGCCCTCATCGAGGAGGAAATTGCGGAAGGCCGTCGCGGCCTTGCGTTGCAACTTCGTCTCGGTCGGCAGATCGAACATCACTAGTATCCACATCAGTCTGTATCCCGACAAGTAGGTGACAACCGCGCTCATCGTCCCAATCCCGCCAGGGCCAGGGGATCGGGCGGAGCGGGAAGCGCGAGGTCGAGCTTTCCGGCTTCAAAGCTCTGACCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGCTGGACCGCGAATTTTGAACAGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTGCGGCTGGACCGCGAATTTTGAACAGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.20,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //