Array 1 5718-2044 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRWK01000022.1 Methanosphaera sp. WGK6 contig00022, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 5717 29 100.0 37 ............................. ATTCTCCTTCAGGGGTGTATGTGCCGTGATGGATTCC 5651 29 100.0 36 ............................. CCTGTGGCTAGTGCTATTGAAAAAATAATAGTACAT 5586 29 100.0 38 ............................. TTCATTATATGAACAGGATAAAAAAGAAACTCCTGAAA 5519 29 100.0 37 ............................. CATTACCTGAGCATGTATGGACTGGTCTCATGCTAGT 5453 29 100.0 39 ............................. CATTTCATCCTCTTCAATCCGTGGAGCAAGAAGGAAAGA 5385 29 100.0 37 ............................. AGTGATATTAATTTGTTCAAAACAAGTTTTGATGCAA 5319 29 100.0 40 ............................. TGGGTGGGATAAAGTACGGTTCACAAGCCATTTTAATGAA 5250 29 100.0 37 ............................. TTTATTGTTGCTTTGATTTCTTCAAGTTCTGTTATGT 5184 29 100.0 36 ............................. ACTAGTCAAACAACAGCAGATACTACACAACTCATA 5119 29 100.0 36 ............................. TTTCCTGTTCAATATAAGGAGTATAAAGGGCATTTA 5054 29 100.0 36 ............................. ATTGTTAATTCAAAATCAGAGCCTAATTGCATACTC 4989 29 100.0 40 ............................. GTGAGTGTAGCTGTAATAGTAAATTCTGTGTTAACAAAAA 4920 29 100.0 39 ............................. CTCTGTAATTTCTCATATATACTCTACTTACACAAAAAT 4852 29 100.0 38 ............................. TATATTTGATAATGTTATATCATTAAGTTATGAATATC 4785 29 100.0 37 ............................. ATTTAAAACTTGGAAGTAAAGGAGAAACCGTAAAAGA 4719 29 100.0 36 ............................. AATACTATGCAGTGCTAATATAGTAATAGAAAGCAT 4654 29 100.0 37 ............................. CCGTGCAACTGGTCATGCAGTAGAAGGAAAAGATTGG 4588 29 100.0 37 ............................. ATATTTCATTCATTGTATTTTCTGAACGAAATAATTG 4522 29 100.0 37 ............................. GTGATTCAGAAAAAGAAAAAATCAATCGTTACTACTC 4456 29 100.0 37 ............................. TTCATTTTTTTCACTTCCTATTATTGAGGGGGTGAGG 4390 29 100.0 37 ............................. GTATATATCAACTCAGCGAAAAATAGGAAAGTTGAGA 4324 29 100.0 36 ............................. TTGACATTGTCAACTATTGAATTATACAATTCTTGC 4259 29 100.0 36 ............................. TTGAGTATGACGACATAAGAAAGGACAGAGTAACAA 4194 29 100.0 37 ............................. ATTCTTGTTTTGTGAAAATTGAAGTAAGTTCTTTATT 4128 29 100.0 37 ............................. AATCATCACGGGTTGGTATATCTTTAATTGTTTCAAC 4062 29 100.0 40 ............................. ACAGAAGAAGAAAATAAACAATTAAGTAAAAAAATATTTG 3993 29 100.0 37 ............................. CACATATGATTTCTATTACTATATTAAGCTCCTATAC 3927 29 100.0 36 ............................. AGTAAATCCTGCCATTTTTCGACATTGCTTATTAAA 3862 29 100.0 36 ............................. AGCGAGGACGACAAAGAAAACTATTTGTACGGCCTC 3797 29 100.0 40 ............................. TAGTTGTTGTGTGTTGTTGTGTTGCAACTTGTTATTTAGT 3728 29 100.0 39 ............................. TAAATACCAAGTCGACAAAGGAACAACTACAACAGATCC 3660 29 100.0 39 ............................. CATTATCTGTGAAGTTTTTAGCTTTAAATCCAATACTTC 3592 29 100.0 36 ............................. CCGTGATAGCAAATCTATGCAACTGAATAATATGTA 3527 29 100.0 37 ............................. CATCAATGAAATCAGTTAATATTTTCCGAATGGCTTC 3461 29 100.0 38 ............................. ATAAATCATTATATATCATTATTAATTACCCCCTAATT 3394 29 100.0 37 ............................. TGCTTCTCGTGAGAAAATCACGAGAAAAATAAACAAA 3328 29 100.0 37 ............................. TTTTTTATTCTAAGCTTTGTCTTATTTTTGCTCTTGT 3262 29 100.0 37 ............................. TAACTTATAACTTGCATAAGCAAGAATTGTACAATAC 3196 29 100.0 38 ............................. GATTATAATTCTGTTTTTAATCATGAGGAAATCAAAGA 3129 29 100.0 36 ............................. TTTAATACTATTCTTGTGTTTCCATCCTCAAATACT 3064 29 100.0 38 ............................. AATCACTCTCTATTTGTTCTATTTTTTGTTTGATTCTG 2997 29 100.0 38 ............................. GGCTTAGAACTAGACACAGCACACAACGACGGAGAAGA 2930 29 100.0 37 ............................. TACAATTCTGTTACAAAAAATTTGCGTAATGCATGTG 2864 29 100.0 36 ............................. TACATTCAGCTACACTTTCACAAGAAAATTATAATA 2799 29 100.0 36 ............................. GAATGTTTAAACCAGAAGGACAACAAACAGAATATA 2734 29 100.0 37 ............................. TGTGGAATGGAAGTGAAAAAATGAAGGATAATCGATA 2668 29 100.0 42 ............................. CGGGGCAAGAAGACCAAAATTTGAAAATCTGTCACGGATGGA 2597 29 100.0 37 ............................. ATGATATAAGGGTTCAAATCCCTTCACTTCCAATTCC 2531 29 100.0 37 ............................. ATTCGTCTTCATAGTCTGTTAGTGTGGTTAGAAATTT 2465 29 100.0 37 ............................. ATAAATGTGACAAATGAACTAAGAGAAATGAATAATA 2399 29 100.0 36 ............................. CCTATTTTGAATGCTCTTATTTTTGTGAATAACTTA 2334 29 100.0 36 ............................. CTTTTCTCATCTTCGGACATTGTCCAGTTCGGTTTC 2269 29 100.0 37 ............................. ATGTTTCTGCGGTTTCTAATGCAAAATTACATAAATA 2203 29 100.0 41 ............................. AAAGAATTAGGATTACGAATGCAAAGTGAAGGAAGGCCAGC 2133 29 100.0 32 ............................. TCGAAAAATGGTGAGACCATTGGTGAAATTGA 2072 28 82.8 0 C...T..................T-...T | A [2055] ========== ====== ====== ====== ============================= ========================================== ================== 56 29 99.7 37 GTTTAAAATAGACTATATAGTATGGAAAC # Left flank : TGAAAACCACAATAAAACATCCAACATTAAATAAAAAAGTATCCTACAGATATCTTATAAGATTAGAAGGATATAAATTAATTAAACACATGTTAGAAGATAAAACATATGAAAGTTTTAAAACATGGTGGTAAAATGTATATTCTAATAATATATGATATAAATGTACATAGAGTACATAAAGTATATAAATTCTTAAAAACATATCTAACATGGATTCAAAACTCCGTTTTTGAGGGAGAAATAACAAAATCACAATATAAAACAATAATCCAAAAACTTAAAGAATTAATTGATGAGGATGAAGATTCAATAATTATATATAATATACCTGAAAAATATATTAATAGAGAGATAATTGGGATTGAAAAAAATCCAATAAATTTTATACTCTAGGTCCACCTCCCCTAGTTTATACACTATTGGAGGTAGACAAAAATAACTACTATTTTTGAGCATTCTAAACTCATAAATAATAAAAATACGGAAAAAATTCCGGC # Right flank : TCTCATTGTATGATTTTGATGGGTTAAATTATTATTTAATTGGATTTATCGAATGATTTATATAGTTTGAAGTTATATATAATTATAATCATTGTAAGGAGTGATATTATGGCAAGTTTGAAAAATATATTATTGGTTATAGTAGTTCTTGTAGTTCTTGTTGGTATTGGATGTTTTTCTTTTTTAGTTAGTGATGATAGTTCTAATGTTTTAACTGTAAATAATACTACAAATGGGACTGTTGGAAATGTTTCTTTGACTGAAGATGTGTCTTCTGGTTCTGGTTCTGATGTAAATCCTAGTGGTGGTTCTTCTCAGGATCCTGATACGGAGGTTCATGTTTCTATTTTTACTGTGAGTGAGAATGAGACTGGGCAGAATGAGGGTATGGAACCTGGGGTTTATAGGATGACTTGGACTCCAAGGGATGGTCCTATTAGTGTTGAAAAAGTAGGATAATTTTTTCAGGGTTTTCTAGATTTTTAGGTATTCTAGAAGCC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAAATAGACTATATAGTATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //