Array 1 83490-80278 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEKY010000019.1 Acinetobacter baumannii strain MRSN409 MRSN409_contig00019, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 83489 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 83429 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 83369 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 83309 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 83249 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 83189 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 83129 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 83069 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 83009 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 82949 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 82889 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 82829 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 82769 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 82709 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 82649 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 82589 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 82529 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 82469 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 82409 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 82349 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 82289 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 82229 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 82169 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 82109 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 82049 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 81989 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 81929 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 81869 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 81809 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 81749 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 81689 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 81629 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 81569 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 81509 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 81449 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 81389 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 81329 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 81268 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 81208 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 81148 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 81088 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 81028 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 80968 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 80908 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 80848 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 80787 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 80727 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 80667 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 80607 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 80547 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 80487 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 80427 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 80367 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 80307 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //