Array 1 254660-252709 **** Predicted by CRISPRDetect 2.4 *** >NZ_CADEHI010000001.1 Streptococcus periodonticum strain Marseille-P9010, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 254659 36 100.0 30 .................................... ACCAGAATATAGTTCCCCTACTTATAACTT 254593 36 100.0 30 .................................... GTATGTGCAGTACGAACCAGAAAATAAATG 254527 36 100.0 30 .................................... TAAGTATTGAAACAGACTGCGAACTTGGCG 254461 36 100.0 30 .................................... TGTGAACTACTTCGACTATTCTTTTGGTTC 254395 36 100.0 30 .................................... AACTGTTGAAATGGATTGAGAATAGTAGAG 254329 36 100.0 30 .................................... CAAGCAGCTAGTGATCCAAACGGTGCCAAC 254263 36 100.0 30 .................................... CAAAATACTGCATCCCTACCCAAATTTTCT 254197 36 100.0 30 .................................... AAACTATTTACATGGCTTCATTTTCTACCT 254131 36 100.0 30 .................................... CTGCGCAATGGGGCGACACGCTCTCTAGCA 254065 36 100.0 30 .................................... GAATAAGTTTCTTAGGCCTGAAACGCTTTT 253999 36 100.0 31 .................................... CCCCTAATGAAAAAATCTTGTCATTTCATCA 253932 36 100.0 30 .................................... CACATCCTCAATCCAATCCGCCACAAACTG 253866 36 100.0 30 .................................... GGTGGTTTTCGTCTTGGAATGGAAAGCGCC 253800 36 100.0 30 .................................... GGTTAATAGCAGAGAGTTTGCTAGAGCAAC 253734 36 100.0 30 .................................... AGAATGTGCAGATTGACTTTCCAGACCAGA 253668 36 100.0 30 .................................... ATAGCGTTGTAAAACCCTGGCGTACAATCT 253602 36 100.0 30 .................................... AAGCAAATACGAACGCTATTTTAGGATTTA 253536 36 100.0 30 .................................... AACAGTTTTTGCAATTGCACGTTTTTGTGA 253470 36 100.0 30 .................................... AGAAGGCATTTCAGAGGATTTAGCTGTAGG 253404 36 100.0 30 .................................... CAAATTTAAAGGCTGAATATGTTGATAGTA 253338 36 100.0 30 .................................... ATCACTTGCAGGAGAGAATAGTATTCTGGT 253272 36 100.0 30 .................................... CTAGAACGTGAGGAGCGTGACTCTGATGAA 253206 36 100.0 30 .................................... ATTCACCATCGCGACTATTTCGCGATGAAG 253140 36 100.0 30 .................................... ATACGGACATACTGGTATTGTCACTGGTTT 253074 36 100.0 30 .................................... ATCCGGTTCAGCAACAATTTGATACCCGTA 253008 36 100.0 30 .................................... TCCTAAAATGGCTACTAAGATTTATCAGCA 252942 36 100.0 30 .................................... TCCTAAAATGGCTACTAAGATTTATCAGCA 252876 36 100.0 30 .................................... CTCAAAATCTTGCTTATGCAAACGGTTGGC 252810 36 100.0 30 .................................... AGTAAGTCATACCGATAATAAAAGCGTAAT 252744 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 30 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ACAGTTGAATGAAAAGTCTGAAGTGAAATCTATGTTAGAAAAATTAGTTGCAACTATTACAGAACTAATTGCTTTTGAATGTTTAGAAAACGAGCTGGATTTAGAGTATGATGAAATAACAATTTTGGAATTGATTGATGCTTTAGGTGTAAAAATTGAAACACTAAGTGACACTGTTTTTGAGAAAAGTTTAGAGATTGTTCAGGTGTTTAAATATCTTTCTAAAAAGAAACTGCTTGTCTTTGTGAATGTATCATGTTATCTGTCTGAACATGAACTAGCTAAATTGGTAGAATATATTCAACTTCATAATATAAATGTACTGTTTGTTGAACCAAGAAAAGTATACGACTTCCCTCAATATGTAGTGGATGAGGACTATTTCTTATCTTGTGAGAATATGATATAATATTAGTAAATATAAGGAATCATTTGAGCTGAAGTCTAGCTGGGACGAATGGCGCGATTACGAAATTTCGAGACAAAAATTGGTCCACGAG # Right flank : ACAATATACTTTAATCATAGGACTTGCAAAATTTTTCAATCGTGCTATAATACCTTTTAGAGACATATCGCTGACTGGAATCTTTTAGAGAGCGCGTGGAGCTGAAAATCGCGCAGAGGAAGGCAGTTGAGACTACTCTGTTAGCTTTTATGCAAACATAAAACGGTGGCTACGTTAGAGCCAATCAGAGGTGTCAACAAACTTTTTTGTTGTACATGAATGAAGGTGGAACCACGTTGCGACGTCCTTTTCGGGATGTCGTTTTTTTTTATTTTGTTGAAGGGAGGAAAAGTTATGCTCTATATGATTGGCGGATCACCCTGCAGCGGGAAATCAACGCTCGCTTCCCTTCTTGCTCGGAAGTACGATTCGCTTCATATCAAGCTGGATGATTTGGTGGACGAGATGATGAGTCAAGCAAGTGTAGATTCACAGCCGATTTGCCTTCTTAGACAGGACAGAAATCCGGAACAAATCTGGATGAGAAATCCAGAAGAGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //