Array 1 1191768-1189650 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL833119.1 Prevotella oralis ATCC 33269 SCAFFOLD4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1191767 47 100.0 30 ............................................... TCAATTGCCCAAGCATTTTGCGTACTAATT 1191690 47 100.0 30 ............................................... ACATCATCGCTGTGCCCGAACTCCTCGATA 1191613 47 100.0 30 ............................................... AACCCTCGGTGAAATTGCAGCTTTCATTGG 1191536 47 100.0 30 ............................................... TAGTTCTCCCCTTACTTCTATGTAACCATT 1191459 47 100.0 30 ............................................... AGCGTGTGGCCGTCACCGTGGCCAATAAAA 1191382 47 100.0 30 ............................................... ACCTCACGCGCTATTCGCTTTCTCCGAAGA 1191305 47 100.0 30 ............................................... CGATACACCTATATATATTGAGATACCATC 1191228 47 100.0 30 ............................................... TGAAACACAATTCGTTGATATTCAATAAAG 1191151 47 100.0 29 ............................................... TCCATTGCCTTCTTCGTATTGAAGCGGCG 1191075 47 100.0 29 ............................................... CTGATGTTGCGCGGATAAAAACCGATAAT 1190999 47 100.0 29 ............................................... TTGCAATCGGTAATATATTTATAAGCGGT 1190923 47 100.0 30 ............................................... TATTAGTTCTTTTACCCTATTCAGCAGCTT 1190846 47 100.0 30 ............................................... ACGGCTGCCGTAATACGCGCGGCCTGTAAA 1190769 47 100.0 29 ............................................... ATATGACCAATTAAAACCGCCAGCACTCC 1190693 47 100.0 30 ............................................... TATAAAGCCCTTGTTTATAAGCATTGCGAC 1190616 47 100.0 29 ............................................... TGTTTTGGGATTTAAATGTTGGTAATCCT 1190540 47 97.9 30 .........A..................................... ACCTTTACCATGGTCTCATGATCGTCATAT 1190463 47 97.9 30 .........A..................................... TAAGGCTTTATCAACGCCTGGAGGGCATCC 1190386 47 97.9 30 .........A..................................... TGCATCGATTTTTCACCTTTGCCGGACTTC 1190309 47 97.9 29 .........A..................................... TTTCGCGCTATAATCTTACTTTTTAATTC 1190233 47 97.9 29 .........A..................................... TTTCGCGCTATAATCTTACTTTTTAATTC 1190157 47 97.9 30 .........A..................................... AGGAGATAAAAAGACGCACACAGGATAACA 1190080 47 97.9 30 .........A..................................... ATAAAACAAACATAATCATCAAGAGATACA 1190003 47 95.7 29 .........A..............C...................... TTTATCGTACTTGGAATAATTGCGAATAT 1189927 47 95.7 30 .........A..............C...................... ATAAACACGTATTAAGGCTAAGACAAAGAT 1189850 47 95.7 30 .........A..............C...................... GAGTGGGACGATTGGATGAACACGTGGGAA 1189773 47 95.7 30 .........A..............C...................... GTTGGGCTTTTAATTGAATGAGATATGAAA 1189696 47 95.7 0 .........A..............C...................... | ========== ====== ====== ====== =============================================== ============================== ================== 28 47 98.7 30 GATGTTTCCGATATTGCAAAGATAGTAATTTTAAAGCAAATCACAAC # Left flank : AATAAGTGCTTCAACGGAGAACTTCGTAAGATTTCTTATCCTGAAATAACATCATAATGGATAGACTGAGTGAATATAGAGTTATGTGGTTACTTGTTCTTTTTGATTTGCCGACAGATACAAAGAAAGACCTTCGGGCTTACACGCTTTTCAGGAAGAATCTAATAAAAGATGGCTTTACTATGTTTCAGTTCTCCATCTACGTACGTCATTGTGCAAGTATGGAAAATGCGGAAGTGCATAAAAAACGAGTAAAGTCATTCCTGCCTGAGTTTGGAAAAGTAGGCATAGTGTGCCTCACAGACAAGCAGTTTGGCAATATTGAATTGTTCTTTGGTAGTAAACCAACACCTCCAAATGCTCCCGGTCAACAACTGGAACTATTCTAATACAAAAGCGAATTCCATTTAAAATATGGAATTCGCTCCCTAAGAAACATCATTTTTTCTTTTTCCAATATCGTTATAAAACATTGAATCACACAATATTATGTAACTCCT # Right flank : GGGTAAAATGCGTACAACGAATTACACGAGTACATATGCAAATTGCATGGTCTTTCGGAGCCAAAGGGGTTGTTGTTCAGGCGGTGGCAATGCATGTAGCTATTATGGGGCTGATGACTGTTACTAGTGTAGGATTGGCTATAATGGCTGTATCAGCTATTATATCGGCATTTTCCGACAAAGCGGGGAATGCTACTGCAGAAATGAAAAAGGCCGAAACCACAATGAAAGACTACGCCACGGCCAATAACACCGAGACGGAGTCCGTTAAACAGGCAAGGGCTGCGCTTGAGATCAATATCGCTAAATTAAAGGATTTCCACGGCACAAAACAGCAGGAAAAGAAAATCGTCGAGGAAATGAACGACACCTACGGCGAGACGATGGGATACTTTTCAAAGGTATCTGAATGGTATGACGCTCTTGTCAAAAACAGCGAGGCATATTGTCGGCAGATGATTGCAGAGGCAAAAGCTCGTAATTTGGCAAATCAAATAGCA # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.93, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATGTTTCCGATATTGCAAAGATAGTAATTTTAAAGCAAATCACAAC # Alternate repeat : GATGTTTCCAATATTGCAAAGATAGTAATTTTAAAGCAAATCACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.40,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //