Array 1 22804-21118 **** Predicted by CRISPRDetect 2.4 *** >NZ_APUK01000107.1 Neisseria meningitidis 2007461 gnm2007461.contig.106, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 22803 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 22737 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 22671 36 100.0 30 .................................... AGGGGTCGTGAATGGAGTTCTTGCAGTTCG 22605 36 100.0 30 .................................... TAAGCGTTTCTTTTTTGGTCTGCTTCTGCT 22539 36 100.0 30 .................................... AATCAGACCGACTTTACAACGAAGGTTTGA 22473 36 100.0 30 .................................... CGACAACAAAGCCGTCTATGACCTGACCGA 22407 36 100.0 30 .................................... CACCCTGATATTCCGCAACTCGATATACTG 22341 36 100.0 30 .................................... TTGGGAGGTGGAAAACCGAATCCTGCACGA 22275 36 100.0 30 .................................... TGCTACCAGCGACAACAGGCATTACGCCCA 22209 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 22143 36 100.0 30 .................................... TCAGCCTCAAATACATCCGCCAAATCGTTG 22077 36 100.0 30 .................................... ACACAATCTCCGCCGTTCCAATCAAATGTG 22011 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 21945 36 100.0 30 .................................... AATGATGTATATAAAATGCCGTAAAAAATG 21879 36 100.0 30 .................................... CGTCTGAAGGTTTGCCCATCTCCTGACAGG 21813 36 100.0 30 .................................... TCGATTGTCTATGAAAGCACTTGATGATTT 21747 36 100.0 30 .................................... CTCTTCATTGAAGAAGTTATAAGCCTTTGT 21681 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 21615 36 100.0 30 .................................... GCCTGCGTACTTGGTACGCTGGTCGCCTCC 21549 36 100.0 30 .................................... TTCATAGATCGATGCATGAGGTTTTCATGG 21483 36 100.0 30 .................................... AGGTCAAAGTGTCAGGCAAATTTAAAGGTG 21417 36 100.0 30 .................................... AAATCCATTTATCGCCCACCCTTTCCGGCC 21351 36 100.0 30 .................................... TGTAAATGAGGTTATTGAAGATGCAAAAAG 21285 36 100.0 30 .................................... TTTTCCAAAGCGTAAAATCACATTCGGGGC 21219 36 100.0 30 .................................... AACACTGATAGGGAATGTACCCTCGATAGT 21153 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 26 36 99.7 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //