Array 1 442942-444118 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOOF010000001.1 Bacteroides sp. NSJ-2 N25_ctg001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================= ================== 442942 35 100.0 37 ................................... GTTTTTGTAAACTCACGAACGTCATCTTCATTGTAAA 443014 35 100.0 35 ................................... AGAATATTCTTGGTGACAAGGCCTTGATTGAGCAG 443084 35 100.0 34 ................................... GAATTGCGACAATAAACAATACACCGATAATTGT 443153 35 100.0 36 ................................... TAGATAAAAGGGGGTAAAGTTTTAATTTTTATAAAC 443224 35 100.0 35 ................................... ACAGCTTGCTCAGGGCTGGGCGGCTTTTCTTTCGT 443294 35 100.0 37 ................................... GTTTGTACTAGCTAATGTTTTGTGGCCGTCTTCCTTA 443366 35 100.0 38 ................................... TTTTTTATTAGCCTAAGATTATTTTACATTTTAGGTTC 443439 35 100.0 36 ................................... ATTAGGCAGCAATTTCTCTTGCGCCAAACACATGAT 443510 35 100.0 36 ................................... AAGGTATATGACGCTAAAACAAACGGTCCAATAATT 443581 35 100.0 39 ................................... AATGATTAACAATACGATTGCACACACAAAAATGACATT 443655 35 100.0 37 ................................... GTTTTATTCGTATGGATTATAGATAACAGGCTGGCAG 443727 35 100.0 35 ................................... AGTTCAGCATTTTCATTCTTCTGTTACTAAAATAT 443797 35 100.0 36 ................................... AATCACGGCTTTTACAACAACTTCCTTACCTTCCAT 443868 35 100.0 36 ................................... AAAATACCGTTTGAAAATTCCTCAGATTTTTCGTAT 443939 35 100.0 36 ................................... GACCGAGTCAAAGCACTTCGCTGGCATAAAATTTCT 444010 35 100.0 39 ................................... ATTCAAACCGTCGGTTTATCGAATAAGCGCTAAAAGAGT 444084 35 97.1 0 ............................C...... | ========== ====== ====== ====== =================================== ======================================= ================== 17 35 99.8 36 ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC # Left flank : TTATATATCAACCTATACGAAAAAAGATAATTAAAACCGTCGAAATAGTCTAAACCTCTTGCGAAAATGAGAATTTGTTTAATTCATTGATTTTCTGCTTATTATTTTAAATGAGAAATAATATATAATGTATAAAAGCTACGAAAAAACTAGCTTTTCTGTATATTAGTAAATCATTTGCGAAAAAAAACAAATAAGTAATTCGTTCTTTGACATAATGCATTTATTATCTGATAATTATAAATATAAGATTAATCTTATTTTCGAAATAGGCTATAATATAACAAATAAAGCAGGCATTTGCGAATAATGAATCGATCATATCAAAGTGATAATCAATTAAATATCTCTATATTCTACAAATTATTTATTTAAATTATAGAAAAAAGGAGTATATTTGCGAAAATTTAGTTCAATATGAATCTATATATCTGAATAACAAGTTATTATATATTTACCCCTATAGAACACACATTATTTAATAATTTGATTATCAATAT # Right flank : CACTGGAATCCAAGCTGAGGCAACTCGTGATAAGCAGCTTCCGCTTTTTAAATTGAGAGTCTGTCTATTTGATCAATTATACGGAGAATCCTTGTATCTGGACAAAGATAATCATAAGCGGACACAAAGGTATCTTAAAAATAAAAAGGATTATGTTGTTCTACATAATCCCTTCTATATTTTTATTCTTAATTGTTGTTTATAAAAGATCAAGTGCCTTGAAACATTTCACCAACTTACCGATAGCAAAGTCAATCTGTTCTTTGGAATGTGTAGCCATTAATGAGAAGCGAATCAACGTATCGTTCGGAGAACATGCGGGAGGAACTACCGGATTTACAAATACGCCCTCGTCAAATAACATTTTGGTTACCATAAATGTCTTCTCCATATCACGTACATATAGCGGAATAATAGGAGTGGAGGTGTGCCCGATTTCGAAACCAAGCTCACGGAAACACTTTAAAGAGTAATTGGTAATGTCCCATAAGTGTTCGATA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 1 118934-119458 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOOF010000007.1 Bacteroides sp. NSJ-2 N25_ctg007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ===================================== ================== 118934 35 100.0 34 ................................... TATTTATTCTTGGATTAAGTTGACCGCAATTTTT 119003 35 100.0 36 ................................... CTAAGTCGGCCAAGGCATCAAGCATTTCCGATTCAA 119074 35 100.0 37 ................................... TTGGGACTGAATTCAATGCGGTGGCATCGTTCTAAGA 119146 35 100.0 35 ................................... ATTCTTTACGATTGCAATAAACGGAACTGCTCGAA 119216 35 100.0 35 ................................... ACCATTGGATTCTCTTGAGCCAGACACCGAATGAC 119286 35 100.0 35 ................................... TTTGATGAGTGAGATGTTTTTTACCATGTCATCAT 119356 35 100.0 33 ................................... TTCGGCGTATTCACCAAAAATTCCAGTACATCG 119424 35 94.3 0 .............................G...G. | ========== ====== ====== ====== =================================== ===================================== ================== 8 35 99.3 35 ATGTAGATCTATTCCAGTATAATAAGGATTAAGAC # Left flank : CTCATAGGCATCTTGAAGATTCCCCGCATTCAGTCGAAATAGTTTTTTTCTAAATTCTTTTGCGAAAAGAAGAAAAAACTTAATCATCTGATAATATGAAGATTATTCTATATTAAGAAAAAATAAGTGTAAAAAGAGATGCGCAAATAATAGCTTTTACGTATATTAGCAAATCATTTGCGAAAAAAGGATTGATATGTTATGCGCTCTTTGAAATATTGTTCTATATATCAGCAACTTACGCAACATAGTTTTAGGGTTGTTTTCGAAACTCGCCAACCCCTAAATATCCAACGATTATTTGCAAAAAATGAAGTTTACACAGTATTCTAATTATCAATCATTTAGGTAAAAATATCACTATTTACACATTAAAATTACAGAAAAAAAAACCACTTTTGCGAAAAATGCTTAAATTAGCATCTACTATTCTGGTTTACAACCTATTATATTCATAAGCAAATACATTCAAGAATATATAACAGTCTAATAATCAGAGT # Right flank : CAAGTTCTATTCTCGTACCAACTGCCAACATAGTCCACCACAATAACACCTTAAGGGTCATCACACTATGATACAATACATTATTAAGTAATTAAAAGCCATAATTAAATATTTAAAGATCTCTTGGTACAATTTACAATCTGACAAAAAATGCCTCCCCTTGCATACAGATAAAAAAACTCCCGATCGCCTTATGGGCAATCGGGAGTTAACTCTATATAATATTGTTTTATAACCCTATTATTTATTCGACTATAACTTATCTTATTTTTTAGACCATATTAGATCTATGGTAGGAAGCATAATATTTCCAATATCACTTCGCTTGATGCAAGCAAAAGAAACGCTTCATAAATAGAATATAGACCAAACTCAGTGCAATAATGGTACCCGACAAATACCCATATTCATTCCCCGGAAATAGAAAATACCCGGCTATAACTACTGCCTGCACCAACATATACACCAACGAAACCACTACGTGAGGAATTTTCAATTCA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTAGATCTATTCCAGTATAATAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //