Array 1 1422102-1420701 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFWF01000002.1 Clostridium baratii strain NCTC10986, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1422101 30 100.0 34 .............................. GAAAGAAATAAATGTACACCAATGGGTTTTTGGA 1422037 30 100.0 36 .............................. GCACCGTTCCCAAAGGTTTCTATGATCGTGTTTGAC 1421971 30 100.0 34 .............................. AAACCAACAAATTTATTAAAGGCAATTCAATCAA 1421907 30 100.0 35 .............................. ATTTTTAACACTCCCCCACCCCCTCTCTTTAAGCC 1421842 30 100.0 35 .............................. TTGATTATATTGGAAAGAAAAAAGAAGTCGTAGAA 1421777 30 100.0 36 .............................. AAATTCATAACTAATTTATTTTTATCATATGCTTTC 1421711 30 100.0 37 .............................. TTTCTGATAAAAGAAACAAATGGATCATTAGCTATTA 1421644 30 100.0 34 .............................. TATCTTTAAATTCTTCCAATGTAGACGGAGCCAA 1421580 30 100.0 35 .............................. ATTTTTATTGTTTGTTTAAACCCAAGTTTATTTAA 1421515 30 100.0 36 .............................. TTACCAGTAAAACTTTTTAAACTTTCTATTCCCTTT 1421449 30 100.0 36 .............................. GACAATTGCGAACTAACTTCATTAAGTTTATCAGCA 1421383 30 100.0 36 .............................. TTAAATTGATTTATTATATTGTTACCTGTATGCATA 1421317 30 96.7 35 .............................C GCTTTTTCTCTTGCATAGCTATCTATATAATTCCC 1421252 30 100.0 36 .............................. AGATGATAGCTTTATTTCTAAAAATGACTATGAATC 1421186 30 100.0 35 .............................. AGTTTGGTGTAGATGAAGATAAAAAGACAATAACT 1421121 30 100.0 35 .............................. GTTAAAAAACTACCTATTAGTTTCAAAGAGAATGA 1421056 30 100.0 35 .............................. TAACTTTATTTATTTTAATAACTTGTTTTTTACCT 1420991 30 100.0 35 .............................. TTACTTTCTGCTGAAAGGTAGGAAATTTTTAAACC 1420926 30 100.0 36 .............................. GGTCTACGCCAAACAAGATCATAGTTTATGATTATA 1420860 30 100.0 36 .............................. CTATAATCTTGCTCTGTTAACATTAGAAGTATGAAT 1420794 30 100.0 34 .............................. GATGGTATGGGAGTAACTCCCGTATATAACTTAG 1420730 30 86.7 0 .........G.....AG............A | ========== ====== ====== ====== ============================== ===================================== ================== 22 30 99.2 35 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : TTAAGCCATTTAGTTTAAAGGAGGGATATTAATGAGTAACAAAATTAATTATAATTATGCCTTTTTATTTTATGATGTAAAAGAAGAGAGAGTTAATAAAGTATTTAAAGTATGTAAAAAATATCTTTCACACTTTCAAAAGTCCGTTTTTAGAGGTGAAATTACACCATCTAAATTAATATCCCTTAGAAAAGATTTAAATAAAGTAATAAATAAAAATGAGGATTATGTTTGTATTATAAAACTTTTAAATGATAATGTATTTGGAGAAGAGATGCTTGGAATTAAGCAAATTACAAATGGTGAAAGTTTAATTATATAGAATTTTACCAATGATAAAATTCTAGTAACTATACGAAAGGGCAGTGTTTATAAGGGTTAGCTTAGTATTTGAAAAATAATTTTAAAATTCATTAAGTCTTTGGTAAAATATTAATAGAAGTAAGGAAATATGGGGTTCTTATACGTTTTAGTAATTTAGGAATCCCTTGTTTTCAATG # Right flank : CACAGAGATTATAAGAAAGGCAACTAAAAAAGAAGAGGAATAAGACCTCTTCTTATAATTTAAATTAACTTTGAGTATATGTACCTAATTTAGCATCGTATTCTATATAAGTATTTGAACCATCTTTATTAACAACTGTAAATTCAGCCTTTAATAACTTAGCATCATCTTTTTTACCGGATTTAGGTCCAAAACATTCTTCAAGTGTACTTGTATCCCCAGGACGTAAAGTATCATATGTTGATAAATATGTTTTTTCTCCATTTACTTCATATGTATATTCTATACCTTTTATAATTTGGTTAGAATTATTTTTGAATTTGGTTTCCATGTATATATTCCCTATTGAGTCAGGCTTTCTTACTTTAAAATCAACAAGTTGTATATCCTTTATAGTTACCTTTGGAGTTTCTTTCTTAGTATCATCCTGGTCTTGCTGATCAGTTTGTTGCTCTGATTGCTTTTGATTACTATTACTTGAAGTCTGATTTGTATTTGAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 1432869-1431270 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFWF01000002.1 Clostridium baratii strain NCTC10986, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1432868 30 100.0 35 .............................. CGGGATCAGTGAATAAAACCAAGTCGCTTTTACTT 1432803 30 100.0 34 .............................. TAAATAATATCTATACTTTCGTATTCGGTATTGA 1432739 30 100.0 34 .............................. AAATCAGTAGGTTCTTATAATAAAGGTGAAAGCG 1432675 30 100.0 36 .............................. AAGAAATAACTTCCTACTTCCAGTGTATCGTCAAAG 1432609 30 100.0 36 .............................. TTGTATAAGTAAAGATGGTTATTTTGATATATTTAT 1432543 30 100.0 35 .............................. AAGTAACCTTTATCAATTCCAATTTGTTTAGGCTC 1432478 30 100.0 37 .............................. TTAAATTAGTAGTACCTTGCATTAAACTATCTTTTCT 1432411 30 100.0 35 .............................. TTATAGTTAATTGATCCGTTTCTAGTACAGTAAAC 1432346 30 100.0 36 .............................. ATTGATGAATTAGGCTTCTTAGAAAGTGAATGTGGT 1432280 30 100.0 36 .............................. ATTAAAAATACTTCAAAATCAATTAGCCCAATTTCC 1432214 30 100.0 34 .............................. TGGTTTTTGGATATGGAACATGAAGTAACTGGTG 1432150 30 100.0 36 .............................. TGCTAGGAATGTAATTACTACGTTTATTCTTAGTAA 1432084 30 96.7 35 .................T............ GTATACTATGATTACTACATCGATTCAGAAGGCTA 1432019 30 100.0 36 .............................. AGAAATATAGTCAAAGAAGAGGTTGAATGTAAATTA 1431953 30 100.0 35 .............................. TCTAGTGAATTGTATTCTTTTAAATATAATTTTCT 1431888 30 100.0 36 .............................. AGTCTGTTAGTCCAACCACTTCCATAATTTACATAT 1431822 30 100.0 34 .............................. GTAGTAAGGTATGAAACTTTTACACCACTTTGGA 1431758 30 100.0 35 .............................. TTATCTTGAGGTTATGGGTTCGAATCCCATCTCTG 1431693 30 100.0 35 .............................. TCGCATATCGGAAAATTACCAAGTAGGGGGAGGGC 1431628 30 100.0 35 .............................. ACTGTTATTTCTCCATCTTCCCAATAAACAAATTT 1431563 30 100.0 36 .............................. AACCAAAACATTTTACTTCCACAACAAGCATCTAAT 1431497 30 100.0 34 .............................. CCCATTAAATGTTGATGAGAACTTCTTGTTCTTG 1431433 30 100.0 37 .............................. TCCTCATTATATAAAGGTTTAATTTTACCCTTATGAG 1431366 30 100.0 37 .............................. ACCAATCAGCATTTTATGTTTTTTACCAAATCTGCAA 1431299 30 76.7 0 ........AC..T..GA.......CC.... | ========== ====== ====== ====== ============================== ===================================== ================== 25 30 98.9 35 GATTAACATTAACATAGGATGTATTTAAAT # Left flank : AAAAGAAAAAAACTCACAAGCCTTAATATAACAGTGCTTGTGAGTCTTTGGTAGTCCCTAGGGGAATCGAACCCCTAATTCCACCGTGAGAGGGTGGCGTCCTAACCGTTTGACCAAGGAACCATGAACAATATTATTATAGCACTTTAATATGCGAAAGTTAAATTTGGTTTATTGCCATATTACTTTAAATAGTGGTGTATTTTTCTAAATTTATTACAAAACATAGATTTAACTTCACTTTGCTTTAGTATTATTTGGATAGGTGATAATGTTTACTTTGAGTTTATAATTATTTAAAATTTTGTTGTGATTAAGTATGACTTTTACCAATGCTAACTTTTATTATAATCTCTTAAAGCATTGAGATATAAGGAATTAAAGAATAATTTGGGAATTACTTTAAAATTAGCTATATCATTGGTAAAATATTAGTATAAATTAATAAAATAGATGATTTAGAGAGTTTTGAACAATTAAGAAAAGTAGTATTTTCAATG # Right flank : AATAAAGATAATAAAATATATTAATGCAAAGTTATATTATGAGTTAAATTAGGAGGAGTGGTATGAAAAAGATAAATACAAAAAAGATAAATTTGGGTTTAATTATAATTTTCACAACGATATTCCTAAGAAGATTTGTTCAATTACCTGATTTTATTTATGGTTTAGGTGTTGGAATTAGTTCTACACTCACAGCAATTTGGATTTATGAATTCAGAAATATGAATAAAATTCTAGAAACTAACAAATAGTTTTTAGAGTTTAGGATTATAAGAATAACATCAATGTTGAATAGAATATTATTATCGTAAATAAAGTCAAATTAACGATTATTATACCATATTTTATAAAATATGGTATAATATTATATAAGGAGGGGTGATTTTGCAGATTTTTGAATTACAAAATAAAATTTATTTATCAAAGGATGTAAAGCAAGAGGAAGTTTCAAAAGAAATAAGTTCATTAATAGATATAACATTAGGAAGAAATGAAAAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //