Array 1 1855194-1853851 **** Predicted by CRISPRDetect 2.4 *** >NC_008593.1 Clostridium novyi NT, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1855193 30 100.0 34 .............................. GCTATTTGGACACTTTCTTCGTTACTTAATTTCC 1855129 30 100.0 35 .............................. ACTTCATCTGTTCCAATTTCGATTGGAACATATTT 1855064 30 100.0 38 .............................. ACGTCACACAGTACACCCCCATTTGTCTACTGGACTTC 1854996 30 100.0 37 .............................. CCCATCTTCTGTCCTCCTTCCTCTTTAACATTGGAAA 1854929 30 100.0 34 .............................. ATATTACATAATCACCTACTTGCGGTTTTATCTT 1854865 30 100.0 36 .............................. GACGAAACACCTAACGAGGTAAAAGAAAAAATAGAA 1854799 30 100.0 36 .............................. ATTATAGACCTCTTATCATCATCAATCGTAAAATTA 1854733 30 100.0 36 .............................. TCGATTGTAAAGTTAAATTTTTTATTAGTAGCCATT 1854667 30 100.0 36 .............................. TAACTCCCAGGAAGAAAAAAATATAATTTTGTTACA 1854601 30 100.0 34 .............................. GGAAAAGAAATTTACAGGTCTAATATTTTGAATT 1854537 30 100.0 35 .............................. GCACTAATACATGCATCTTCACTATCCCACCAATA 1854472 30 100.0 35 .............................. TACTTGAAATTTCTTGTTTATATTGTCTAGTTTGT 1854407 30 100.0 35 .............................. AAGAATGGATAAATCAGATTTTAGAATTGACACAG 1854342 30 100.0 36 .............................. TACTTATTTAGCAACCCCCGAAGTAATTGAGGCAAT 1854276 30 100.0 36 .............................. TCTATAACAACTAAAGATTGGTGCTCAACACCAATT 1854210 30 100.0 37 .............................. TTTACAAGTGTTCGCTTTTAGTTTTTCGACAATCTTT 1854143 30 100.0 36 .............................. CATAAATGTTTCTTCTTTTTAAATTTCTTTAATATT 1854077 30 100.0 35 .............................. AATCGACTTTATAATATTGAGTGTGGACATAATTG 1854012 30 100.0 35 .............................. GCATAATTAAATAATTTATTTGCTTGAGAGTGAGA 1853947 30 100.0 36 .............................. ATATATTTAAAAAAGTTTCAAGTTTTTTCAAATTTG 1853881 30 93.3 0 ...............T.........C.... | G [1853853] ========== ====== ====== ====== ============================== ====================================== ================== 21 30 99.7 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : AGCCATTTAGACTTAAGGAGAAGATGTAATGAGTAAAAATATGAATTATAACTATGCATTTTTATTTTATGATGTAAAGGAAAAAAGAGTAAATAAGGTTTTTAAAGTTTGTAAAAAATACTTAACTCATTATCAGAGATCTGTTTTTAGAGGTGAAATAACACCTTCAAAAATAATAAAACTTAGAGAAGATTTAAAAAAAGTTATAGATGAAAGAGAAGATTTTATATGTATAATAAAATTATTAAATAACAAAGTGTTTGGCGAAGAGGTACTTGGCATAGATATTGAAACAGCAGAAGACTTAATATTATAAAAATTATTTTCCCAATCGATTCATAAAGTAAAATCGCTTAAACCTCTTAATTTAAAAGGGTTTGATAAGGTTTTTTAGTGAAAAAATTAAATAATCAAAATCGGTTGGGAAAAAATTAACGAAAGTCTTTATTTTCAATACTTCCAAGGGTATAATGAAAATAAGGAATGGCTATTTTACTGTA # Right flank : TTATTAAATAAGGTTTCTTTATAAGATTAGATATTGTTCATAAATAGACAAAAAAGCAAAACTGGATTTTCACAGTTTAGTGGTAATACTATATAAAAACAAAAATAAGTATTAAATAAGCTCTAGGTTAATCCTAGAGTTTTTAGTATAATTTGAAGTTTACTAAGATGAAATTAATATTTTTGGTATTTGAAATTTATGGAAAAATATTATATAATTTTTATATAAATATTAATATTGGAGGTATATATGAAAAGGTTTTCGGAGTATAAGATTAAATTTATTGAAAGTTTAATTTTATGTTTTATGTTAATGCTAGGAATAAGATTTACATCTTTTGCAGATACCAAAACTTTTTCATCGGAGATTGTAGACACACAAAAAACTAAAGATAAGGTCATGATAACAAATGGTAATGAAAATATTAAAATTCACTATATAGATGTTGGGCAAGGAGATTCTGCTTTGGTTCAACAAGATGGATATACTATGTTAATTGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 1866264-1864576 **** Predicted by CRISPRDetect 2.4 *** >NC_008593.1 Clostridium novyi NT, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================================== ================== 1866263 30 100.0 35 .............................. CAAAGCTACAAACGACAAAACAGGAGCATTTAACG 1866198 30 100.0 38 .............................. CATGGTGATTATGAAGTATATGAAGAATCAGTCGGTCA 1866130 30 100.0 35 .............................. AAAATTAAATTCCTATTATAAGAATTATTATCAAC 1866065 30 100.0 35 .............................. AAGCCTAAATGCCTATGCTGAGTAAAAAATTCTAA 1866000 30 100.0 34 .............................. CGCTCATTTTGTCTATCTCACTAATCGTTAGATT 1865936 30 100.0 35 .............................. TCCGTAGAATAGAATAGTTTAGTGTTGGCAATTTC 1865871 30 100.0 35 .............................. ACTTTTACAGTTATATCATCTTTCTTGCTAAATGT 1865806 30 100.0 36 .............................. TCTCTATACTTGTAATTTCCATTTGGAAAAGTTTCG 1865740 30 100.0 36 .............................. CCGATTCTGATTTGTCGAATCCCATTTGAGTAGAAA 1865674 30 100.0 35 .............................. CTAATTGTTGTACTTAGTAATGCTTTATTATTTTG 1865609 30 100.0 36 .............................. TAGAATTGTAAAGATAAAAATATTTTAAAAATTAAA 1865543 30 100.0 36 .............................. ATATTTTCTTTTATTTCCTTAACCATTTCTTGTAAT 1865477 30 100.0 37 .............................. AAAGTAAGAAATTCACACTTGCTTATACAATTTGCAA 1865410 30 100.0 34 .............................. TTTTCAGCTGCAGTTAAATTTGTTGTTTCTTCAC 1865346 30 100.0 35 .............................. GTAAAGGAAATAATGATTTCCTTGAATTTATTAAG 1865281 30 100.0 36 .............................. CAAAGATAAAAAGGTTCAAAGTAAAGAAGAGCAATT 1865215 30 100.0 36 .............................. TTGGACGCTTTAATAGGACAGGTTGTTGACATAAAT 1865149 30 100.0 36 .............................. CTTATACTATCATTCTTCTTTTTACCAGCTTGTTTT 1865083 30 100.0 35 .............................. TCATCTGACCACTATAATATATCGGTGAGGTTTGT 1865018 30 100.0 37 .............................. GGCGAAAAGAATTGCTTTAACTAATAAAGAATTGCAA 1864951 30 100.0 36 .............................. TTATGTTTACTGTTTTGTTCATGTTTCCGCCTGAAA 1864885 30 100.0 36 .............................. CTTTAATAACGCTTATTCAAGTTATAACGGGGCTTT 1864819 30 100.0 36 .............................. GATTTATAAATATTTGAATAATCTTTTTTAATTAAA 1864753 30 100.0 35 .............................. AAGCTACAAACTTTATTTGTTCTATTGTAAATTCA 1864688 30 93.3 52 ................A..C.......... TTAATATTCGTATGAGGTGCAATTATGTTATAATAAAAGAGAAAAAATTATT 1864606 30 90.0 0 T..............AA............. | C [1864597] ========== ====== ====== ====== ============================== ==================================================== ================== 26 30 99.4 36 GTTGAACAATAACATGGGATGTATTTAAAT # Left flank : CAGATAATTTTAAAGTTTATGTATATTTTGATGATGGTTCTATTCATTTATATGATGCAAGTTATTTAATAAAAAATGGAGTTTTTAAAGTTCTCCAAGATATTAACTTGTTTAAGGAAAAATGTACTGTACTTAATGGAACTTTAGCATGGAGTTTAGATGATAGCTATGATGAATCAACTTGTTTAGATATAGATCCGTTTGTAATATATGAAGAATATCCAGAAGTAGATGAACCTGAATTTATTTTTAACATAAGTGATAAATTAAAGTTATAAAAATAGATATTGAAACAGCAGAAGACTTAATATTATAAAAAATATTTTCCCAACCGATTCATAAAGTAAAAGTGTCTATACATCCTAATTTTAAAAGATTTGATAAGGTTTTTAAGTGAAAAAATTAAATAATCAAAATCGGTTGGAAAAAAATCAACGAAAGTCTTTATTTTCAATGCTTCCAAGGGTATAATGAAAATAAGGAATGGCTATTTTACTATG # Right flank : GTAATTAACTTTTGAATTTTAAAAATAATGAATATTAACATGAGATGTAATACTACGGAAAAAATTTTCGTAGTATTTGTTATAGTTATCAGTAATAAACTTATGAAACATTACATAGAATTAATTATTAATAAAATTATTTAAAAAGGAGATTTAAATAATGAAAAATATAAGAAGTTTTTTAGCAAATATAAGTTTAATAAAGATACTAATAATAAAAATATACTATTATATATTATTAATAGACAAAAGATTATATAAAAATAAAGAAAGGCAATTTAAGTTAAATATTGATATAGAAGTATATAATCTTAAATAATTAAATACAAGGTAAAATAGGGTTGAAAATATTTTCTTCAACTCTATTTTTTATATTAGTAATTAACTTATAAATTTTATTGACAATGTTAATTAATGGTATTATTATATAAATAAGGGGTGAAAATATGGAAGTGTTTGAAGAAAAAGTAAAAGTGTACTTGTTAAATGATGTACGAAGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 3 1870432-1867121 **** Predicted by CRISPRDetect 2.4 *** >NC_008593.1 Clostridium novyi NT, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1870431 30 100.0 36 .............................. ACCTCTAATGCTTTTGCAACATCTTCCTCACTAGGG 1870365 30 100.0 36 .............................. TCTGTTACCGTAGCGTATAGCACCTTTCCATTTTGT 1870299 30 100.0 37 .............................. TTTTGTTACCTCCTGTTTTCTTTATATATTAATTATA 1870232 30 100.0 38 .............................. GTGGAAGAATAGCCACCAGAAACTACGAAAACAAAGAA 1870164 30 100.0 36 .............................. TTTTCGCCTTTTTAGGTTTCTTTGCTTGTGTACCTT 1870098 30 100.0 35 .............................. GGAATTGCGTCGGGATTTTGTGGGATTGAATATGT 1870033 30 100.0 35 .............................. TATCCTCCACACTATACTCACCATCTTCCAAGTAA 1869968 30 100.0 36 .............................. TCAATCGTAAAATTAAACTTCCTATTAGTCATTATA 1869902 30 100.0 36 .............................. CCAATAGCCAAAATTTCTGTAATAGGACAGAAAAAA 1869836 30 100.0 36 .............................. TAAAGTTACAACCTTACCATTAGTAGAAAACTTAGG 1869770 30 100.0 36 .............................. AAGCCTTTAGCAGTCCACTTAAAAGCCTGTTTGCCT 1869704 30 100.0 34 .............................. CTCTTAACACGAGCAAGAATAGTAAAAACAGAAG 1869640 30 100.0 36 .............................. ATAGTTTTTCCAATTATAAGAAATAATCCGCTACAT 1869574 30 100.0 35 .............................. CACTTTACGTTCTTGAGAAATAAAAGAACGAATCA 1869509 30 100.0 36 .............................. AACACAAACGCACAATGTAAATGCGGGTGATACCTA 1869443 30 100.0 36 .............................. AAAAAGAGATACAGGAAGATAATGCGGTGGATTATG 1869377 30 100.0 37 .............................. TTTTGAAAGCCACAGATTCCGCCTCAAAATCCTTTAA 1869310 30 100.0 36 .............................. ACCATTTTTGTAGCCCTTCTACATCTTGTGTTTGTA 1869244 30 100.0 35 .............................. TTTTGACTATCCAATGCATAGATTTTTGGATAACC 1869179 30 100.0 37 .............................. TGCTTTCCCATATGCCTTTGAAGATATTTTTAATGCC 1869112 30 100.0 37 .............................. GACGAAACACCTAACAAGGTAAAAGAAAAAGAAAAAA 1869045 30 100.0 36 .............................. GAATCGGCAACGCAAGGGTTAAGGAGATATACAATT 1868979 30 100.0 34 .............................. TTGTAACCGGCGTTTAAAATAATTCCGTCACCGT 1868915 30 100.0 34 .............................. ATCATGCTTGTACCATCTTCGACAGGTTTCTCGG 1868851 30 100.0 36 .............................. AGCAAAATTCGCTAAACTTAAGTTATCCTCTAAGAG 1868785 30 100.0 36 .............................. GAAAATGGAAACTGTAGAGCGTGTAGATATGTTAGA 1868719 30 100.0 36 .............................. TAATAATAAAATATGTGGAGAGTACCCTCTATTAGT 1868653 30 100.0 34 .............................. GATAACTCTTTAAAATATTCTGCACCTTCTAGAC 1868589 30 100.0 34 .............................. CTTAAACCACTAGGAACACCTCCTGGACCTTCTG 1868525 30 100.0 37 .............................. AACTAAAAGTCATTTGCGGTTGTTCCAAACGTTCAAC 1868458 30 100.0 36 .............................. ATAGAGTTGTCTTTCATATCTCCAAGACCTATAGCT 1868392 30 100.0 34 .............................. TTCCATACCATATCGTTAAAAGCCTCTTGTTCCC 1868328 30 100.0 35 .............................. GATAGCCAAGAGAGCTGTTTAAAATTCATGTCGCA 1868263 30 100.0 36 .............................. CGTTCGGTTAACGGAAGTAATGCACCTTTAAAAGAA 1868197 30 100.0 36 .............................. TAAATTCGAGCTGAACATTTTCCAACGCACTATTTA 1868131 30 100.0 35 .............................. TCTGTTACCGTAGCGTATAGTACCTTGCCATTTTG 1868066 30 100.0 36 .............................. TCCGTTATAATTCCCATTGCAATATTAGCAATGGGA 1868000 30 100.0 34 .............................. GAATAATCTATCGCATTATCTTCCTGTGTTTCTT 1867936 30 100.0 34 .............................. TTCCGTCAATTTTCGTTAAAGAGGCCAGTAATCT 1867872 30 100.0 35 .............................. GATACGCAAGGCTTTAAGCACGATATAGGGTTTAG 1867807 30 100.0 36 .............................. AAAAAATCTTGTCCAGTTTCTATGTGTCCACACACA 1867741 30 100.0 36 .............................. CAACAAGCTATTTTATATTCTGTTATAGGGTATGGT 1867675 30 100.0 36 .............................. TTTTCAAAATCTATCTTTTCCATGAAAAAAATGCCT 1867609 30 100.0 35 .............................. TTGTAATTTAAATAATGGAGATAATGTGCCAATTC 1867544 30 100.0 36 .............................. ATATTCTTTAGTTCCCTTTTAATATACCATATCGCT 1867478 30 100.0 37 .............................. GTGGAAATATGACAAGCGTACAGGACAAAGAATACCT 1867411 30 100.0 36 .............................. TCGTCATTATCCCCGTTTTTATCCTTTTCTAATACT 1867345 30 100.0 34 .............................. ACAAATCGGTACATTTGTACCTACACCAAATATA 1867281 30 100.0 36 .............................. GTAAATATAAACAATAGATACAAATTATTAAAAAAT 1867215 30 100.0 35 .............................. ATAGTTCAAAAACTTAAGTTTGGTAATACAAGCTT 1867150 30 96.7 0 ......................G....... | ========== ====== ====== ====== ============================== ====================================== ================== 51 30 99.9 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : TGCAGGAATGTTGAGGAGTGTTGGAGTTCCTACTAAATTAGTAATGGGATATAAAAATGATATAAAAACTTATCATGCTTGGAACCAAGTATATCTACAAAAATCTAATAAATGGGTTACTATAGATACTACCTATGATTCATGTTTAAAAAATAAAAATTTATCACTTTCAATGATAAAGGATTCAAATCAATATAAAGTTAGTAAAGAATATTAATTTAAATGGAAATAAGCAGATAACCACAATTGTTGGTTATCTGCTTTTAGTTTTGTTTAATTAAAAATGTTTATAAAGTATTGATACATACGATTTAATATGAAATTTTCCCAACCGATTCATAAAATAAAATCCCTTAAACATCTTGATTTTAAAGGGTTTGATAAGGTTTTTCTATGAAAAAATTAAATAATCAAAATCGGTTGGGAAAAAATCAACGAAAGTGTTTATTTTCAATGCTTCTAAGGGTATAATAAAAATAAGGAATGGCTATTTTACTGTA # Right flank : TAATTCATGATAGAGTTTTTTATATAAATTTATTAAGGGAGTGATTATATGCCAGAAATAAGTTTATTTTTTGGAATAAGAGTTACTATAAATTATAACGATCATGTTCCGCCACATTTTCATGCTGAATATAATGGAAATAAAGTTTTGGTGGATATTATAAATTGTAAAGTAATAAAAGGGTTTTTTCCTAAAAGACAACTAAAATTAATTCTTGCATGGGCTGAGATACACAAGGATGAGTTAATGCAAAATTGGGAACTTGCAAGAAGTCATCAACCATTATATAGAATTGCACCACTTTCTTAGGAGGGATGATTATGGAATATATGCCTGAGGTTATACAAGTTATTCCTACAGATAATTTTAAAGTTTATGTATATTTTGATGATGGTTCTATTCATTTATATGATGCAAGTTATTTAATAAAAAATGGAGTTTTTAAAGTTCTCCAAGATATTAACTTGTTTAAGGAAAAATGTACTGTACTTAATGGAACT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //