Array 1 672204-674101 **** Predicted by CRISPRDetect 2.4 *** >NZ_QICX01000001.1 Chryseobacterium sp. CBTAP 102 Ga0215884_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 672204 47 78.7 30 AA...A..AAC.....GG.T...C....................... TGCAATATTATCTATCAAAGAAGTTATACC A,A,A [672206,672215,672219] 672284 47 100.0 30 ............................................... AAAATACAATTTAGGCATTGGTGAAGAGGT 672361 47 100.0 30 ............................................... AAGAGGAATATATAAACCTGAAACTTCTGT 672438 47 100.0 30 ............................................... ACCTTAGAAACTTTTATAGCATCCCATCCT 672515 47 100.0 30 ............................................... AGCCAACGTCTTGCACCTGTGATATCTGAA 672592 47 100.0 30 ............................................... CTGAAGCCTAGTAGCCCCGAAATTGATGTT 672669 47 100.0 30 ............................................... TGCTACGTCAATAAGGTTGAGGTTTTTGTA 672746 47 100.0 30 ............................................... AAGGTTAAAAGATAACCCTAAAGGCGATAT 672823 47 100.0 30 ............................................... AATATTTGATAAGCATAGACGGCGAAACAT 672900 47 100.0 30 ............................................... ATCTATAAAATTATCAATCCAAAACAATCC 672977 47 100.0 30 ............................................... TAATGGAGTTCCGCAATAAAAGCAAAATAA 673054 47 100.0 30 ............................................... ACAGTGAAGCATATTACATATGATGCAGTA 673131 47 100.0 30 ............................................... TTTTCTCTCTTTTTGTCGGAATGATGCTCA 673208 47 100.0 30 ............................................... TGGAATTGGTTACGGCTTATTCCAACCCAT 673285 47 100.0 30 ............................................... ATGAAACAAGTTTTGTCTCAGCGAAGTTCA 673362 47 100.0 30 ............................................... CTTCCCACATCCTTTGGTACTGCTCTCTTG 673439 47 100.0 30 ............................................... TGGTTGCATCATATCGATTACGTCTTGAGA 673516 47 100.0 30 ............................................... AGTTATTCAAAAAGAACAAAATACTAATGT 673593 47 100.0 30 ............................................... TTCGCTTTCCACTTCAATTTCACCAGTTTC 673670 47 100.0 30 ............................................... AATTACGCTTTATTTCCCGACGGTGCAATT 673747 47 100.0 30 ............................................... TCTGAATCCTTCATTAGTATTGTTTGTCCA 673824 47 100.0 30 ............................................... AGAGCTCAGGAATATATTAAACATATTAAT 673901 47 100.0 30 ............................................... TTATTTTCAATTCTTTCGTAATTATACGTT 673978 47 100.0 30 ............................................... TTATCTAAAGTAGATGTTGAAACCGTTGTA 674055 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 25 47 99.1 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAGTCACAGC # Left flank : TTCTTCGCTACATCAAAGAAATCAGGATTTTTAAGGTGAGCTTCTAGATCAGCCGGTTTTTTATCTTTTTCTGTTACTGAAGCCGGGTCTACTTTGATAGAATTCATATCAATAATAAAATTTCCTGCTGCAACCTGACCTGCATCAACACTGATGTCTCCAGACTTTACCGTAAGTGTTCCCCAACGAGGTGCCATCCCTCCTTTGTGGAAAGCTTTCCAGTTCACTACTGAAGCTACTGTATCTACTGCCAGTGTTTCACCTTTGCTTTCAGCTACTGTCTGCTCCTGAGCTGTCGCTGCAGACTCTGCTGATTTTTCTTTATTACATGATGCTAAAAGCAATCCTACTCCTACTAATGCAATTACGCTAATTTTTTTCATATTGAACTGTTTTAAAAAAGTTTATTGAAATTTTGTTGTTTTCGGGTACAAAAATAGAAAAACCTAATTGGAGATCCCTTAACATACGTCAAGAAATGTGGTATTTTTATTATTTGC # Right flank : CCTCAAAAAATAATCTACTGAAAACCAGTAGATTATTTTTATTTTTAGAAATTAAAATTTAGAATAATTCAAGCTGCTGGAAAGTTGGTGGCGGCTCTTCTTTATTTCTGGCAAAAAAGATCTCGATGTCTCCAAACTGTTTATCGGTAATGCACATGATGGCCACTTTCCCGGCTTTTGGAAGCATAAATTTTACCCTTTTAATATGAACTTCAGCATTTTCACGGCTTGGACAGTGGCGTACATACATTGAAAACTGAAATAACGTAAAGCCGTCATCAATTAATGCCTTCCGAAAGCGGTTCGCATCTTTCATATTCGCTTTCGTTTCGGTAGGGAGGTCATATAATACTAAAACCCACATAATTCGGTATGCATTAAACCTTTCGGCGTTCATGTTTTTATTTGTAAAATGTACAATTTAAAAAGTAAAATGTAGCCTAATTCATCACATTAATTCTGGATAAGAGATCAATCGTTTTTCCCCTGTATAGCATTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-2.70,-2.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [66.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //