Array 1 34686-32408 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABSNS010000011.1 Lactobacillus delbrueckii subsp. bulgaricus strain LBPUFSC001 001SC_S2_L001_R1_001_contig_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================= ================== 34685 33 100.0 36 ................................. TTAGCCTTAACTCAGTTTCCAGCTCTACGTAGAACC 34616 33 100.0 34 ................................. TGCAATAATCTTGGCAATGTAATCAATTTGCGCT 34549 33 100.0 35 ................................. TTAGGAGCAAGCACCCCTTGCATGTCATCGTAGGC 34481 33 100.0 33 ................................. AACCAGCCAGTGATTTGCGTCTCTCATGATGAC 34415 33 100.0 33 ................................. CAACTTAAGGCCAAGGGGATCACTGGCATTGAC 34349 33 100.0 36 ................................. GGTCCAGTCGTCAGCGTAGTTGTAATGCTCAACCAC 34280 33 100.0 34 ................................. CGCCAAAATGACAAACGTAAACTGATACGCCAGT 34213 33 100.0 38 ................................. TTAGCTTGTGCCCAAGCCATCTTTAAGGCTTGAGCAAA 34142 33 100.0 32 ................................. CAATTTATGAGAACCACCCCTATCCATCGTGA 34077 33 100.0 35 ................................. ATCATCGGCTGTGGGTTTGGGCCAGATGATCCAGT 34009 33 100.0 35 ................................. CTGGATGGGAACTGCTCTTGCCGCCGCGGCGGACA 33941 33 100.0 33 ................................. CGATACGGCAGGTCTCTTTGGCTACGGCGACAC 33875 33 100.0 34 ................................. GAAAGAATTGTCCGGATCCGGAAGGCCGATTTGA 33808 33 100.0 33 ................................. TTGATCACCTGCGCAGTGTCGATGGCAGTCCGC 33742 33 100.0 37 ................................. CCAGCTAACGAATCGGAATTTAAATCCGATGTTAGCC 33672 33 100.0 39 ................................. GATGGACCCAGACCACTCATCTATAGCCCAAGTGGTTAA 33600 33 100.0 35 ................................. GCTATAGAACTCACACTTTGAAAATACATGTCTAA 33532 33 100.0 33 ................................. CAAAATCTGCTCATAGCTTTTAAGACTCTCGAA 33466 33 100.0 38 ................................. CATGGCCAAGGAGGCCATCTAAAGGGATAAGCCGCAAG 33395 33 100.0 35 ................................. GTCATCGTTGACGATCAAAGCGTTTCGCATGGCCG 33327 33 100.0 35 ................................. TCGATCGCATCATAGTTTGCGTCTGCATCGTCATC 33259 33 100.0 35 ................................. AAAGAGATTATCGAGTACTTGAATAAAAAAACAGA 33191 33 100.0 35 ................................. TTGCTTACAACTATAGTATACTACGTTTAAACGTA 33123 33 100.0 38 ................................. TGACCGTCTGAGCCCTGTCAGCGCCAGCAGCCTAAAGT 33052 33 100.0 33 ................................. ATTGCTGTTAGCTAAAGAAGATAACTAGCTAGG 32986 33 100.0 35 ................................. TTTATTGGCACGACACCACCGCCTAATCCATCAAA 32918 33 100.0 38 ................................. AAACAAATGACGGGTGGTTAGGCAATTTACGCATCGTA 32847 33 100.0 36 ................................. TCAACTGATGGCACCATGACAATCAACGGCATTGAC 32778 33 100.0 34 ................................. AACCTGGGCAACATCAGATTTAAATCCCGGCTCA 32711 33 100.0 38 ................................. ATCGACGGTTAAGGGCCGCTCTTGGGCTTGCTGTGGTG 32640 33 100.0 34 ................................. ACTGCCGACCGCTGCCACGTAAACTGCGTCTTGA 32573 33 90.9 33 ............................A.G.G GCTGAAGGGAAAGTAGCAGCAGAAAGAAGAAGC 32507 33 100.0 34 ................................. ATTTGCTGGTACAAAAGTAACAGAGTTACAACAA 32440 33 81.8 0 ..........A...AA....T.....CC..... | ========== ====== ====== ====== ================================= ======================================= ================== 34 33 99.2 35 GTCGCATCCCGCATGGGATGCGTGGATTGAAAT # Left flank : CGGATACCCTCCGTTTTTATGGAAGTAAGTGATTGTAGATGATGATGGTAATTGTCAGTTATGACGTGAATACTGAAACTGCTTCGGGAAAGAAGAGACTAAGAAATGTTTCCAAAATATGTAACGACTATGGCCAAAGAGTTCAAAATTCAGTATTTGAGTGTCTTGTAGATTCTACAAAGCTTGAGGAAATGAAGGAACGCTTACTAAAGGTATATGATGAAGAGTGCGACAGCTTGTACTTCTTCAATGTAGGCAAAAAATATGAGAACAAAGTTCAGTCTTATGGGTGTAAACAAGTATTAGACTTGGGAAAGCCAGTTGTCTTCTAATTATCTAGACAGTGCGAGTGTGAAGCTAACAGAATTAGGCAGAGGATTCGCACTGTTTTTGACTATTTTTTTGTAGTCTTGAATATAAAATTGCAGTTTTTTAATGCTTTTTATATTTTGTATGCCCAATATTTAGCTGTGAAAATGCTTTTTTAACTAAATGTTGCG # Right flank : ATCGCTTAGATATGTGGATGCTTGATAGTCAAATTCCACTAAAAGCACTCCCTCGCGGGGTGCTTTTTAATATTTTGCTAAATCAAACGCTTCACCAAGCAAGCAGGAAAAGATTATAGTAAAATATACTGGTTATAAAAAAGCTGAGTCAAGCTCAGCATCCCCAAAACAAAACTTAGTTGAGGAGAATAAACATATGCAAGATATTTATATTGTTGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCCGCCATCGACCTGGGCCAAATTGCCCTGCGCGGCGCATTAAAAGAAGCCGGCCTTGACGCCGAAGCCCTGGACACCCTCTTCATGGGCAATGTCCTGTCTGCCGGCTTAGGCCAAAACATGGCCCGGCAAATTGCTTTAAACGCCGGGATGCGGCAGGACTCAGTCGCCGTGTCCATCAACGAAGTCTGCGGCTCCAGCCTCAAGGCTGCCCGCCTGGCTGAAGCCCAAA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCGCATGGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.60,-9.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //