Array 1 933-178 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMZT010000025.1 Clostridium botulinum D/C strain IZSVe-TV_3522_5_13 NODE_25_length_31565_cov_54.0443_ID_164204, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 932 36 100.0 34 .................................... ATATAAATCTTATTTCCATCAAATACATATCTAG 862 36 97.2 34 T................................... AATGCAAGTACTGTTTTGAGATGGCTACAGAAAT 792 36 97.2 35 T................................... CATTAGTTATTGAAGAATTACCATCATTTCCACCT 721 36 100.0 37 .................................... TATTTGAGTTGTTAGACTCTAATAAATTAAATGGATT 648 36 100.0 37 .................................... ATAGATGAATTAGAGGATTTAACTTATGCAGTAGATA 575 36 100.0 36 .................................... TTATCTAAATTGGGACTACACGAATCATGCACAAGG 503 36 100.0 38 .................................... TATAAAAGATGTTGAAGCCTATAGAGCTAATAAAAAAG 429 36 100.0 36 .................................... AAAAGCATTAGGACATACTGTTGTAAATTGCACTAC 357 36 100.0 37 .................................... ATAGGAAACTTTGATAATGTAGTAAAAAACTAAGTAG 284 36 100.0 35 .................................... CTTCTAGTTCTTCTTTAGTATAGTCTTTACCTTCC 213 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 11 36 99.5 36 GTAATAAAGATATTAAGCTCCATAGGAGATTGAAAC # Left flank : GCATTAATGAAAGAAATTGAATATATACCGTTTTTAATTAGATAAGATAGGAGAAAATGTGGTATGATGTATTTAGTTAGTTATGATATTGTTAATGATAAGAAAAGAACAAAACTTCATAAATTGTTGAAAAACTATGGTGTAAGAAATCAGTTCAGTGTTTTTGAATGTAATTTGGATGATAAAAAGTATGTTGAACTTGTATATAAGATTAACAATATTAAAGTAGAGGCAGGAGATAGTATAATGATTTATCCATTATGTTATTCTTGTAAATCAAAAATAGTAAGAAAAGGTTCATTTATTGAAATAGATGTAAAAAATATGATTTTTTAATGCGCCAAGCTTAGTGTTTGAAAAAGTACGTTGACATGGCGATGGCTTTAAATAGCCATTTGTAGATAGTTTTTTATAGTATTGGTATAAAATTTAAAATAATAATAGATACTTTGCGAATAATGCGGGTCTATGTTAGTGTTTGTGAGGGATAAAACGCCGGC # Right flank : CGAAAGTAGCTAGTCTTGAATGGTTAGCTACTTTTTATGTAATAAAGATATTAAGTATAAGTGCTATTATGGGAATGCAAGAAAGTGATCATCTAAGGATATAAGAATTAGATTTATGTATAATACTATAATTACAAACATTTAAACTGGAGGTAATTATGATTATACAAATGAATAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAATAAAGATATTAAGCTCCATAGGAGATTGAAAC # Alternate repeat : TTAATAAAGATATTAAGCTCCATAGGAGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : NA // Array 1 9793-11666 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMZT010000037.1 Clostridium botulinum D/C strain IZSVe-TV_3522_5_13 NODE_37_length_26163_cov_148.146_ID_164226, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 9793 30 100.0 36 .............................. TGATAAAAAATTACCGTATATTTATATAATAATAGA 9859 30 100.0 36 .............................. AGATGTCTCTAATACACTTCTATCGAGTAAAGTTCT 9925 30 100.0 36 .............................. GCTTCAAGGACATTAGTATCTACATTCCCATTATCG 9991 30 100.0 35 .............................. TAAGATACTAGATTTCCCTTATTCATTGCAGTTAA 10056 30 100.0 35 .............................. TCTATGGTTTTATCTTTATTTAGATACTCTTCTAT 10121 30 100.0 35 .............................. TTTGCACGTACTGGACATAAACAACATGAACAACA 10186 30 100.0 36 .............................. GAAACCAAAAGCCATCAATAGAAACTCACGCAATAC 10252 30 100.0 38 .............................. ATAAAGTGCTTTGAATTCTCTCTAAAATTTCTTCCAGC 10320 30 100.0 35 .............................. TAGGGTAACGACCTTTCTATAGTAAATTTCATATA 10385 30 100.0 37 .............................. ATTTCTACACTGTCTAAACGTTCTAATGTAAGTACAA 10452 30 100.0 37 .............................. AGGCTATGTCTGGAATGCTTGCAATTATAAATGCATC 10519 30 100.0 37 .............................. TCTTTATTTTTAGTTTCTAGTTTTACCTTCTCACCAA 10586 30 100.0 35 .............................. GAATTAAAACTTCAAGAAGATAAAATTAACAAAGA 10651 30 100.0 36 .............................. AGAGAAGAAATTATCATCAGACACTATTAGAAATAA 10717 30 100.0 36 .............................. TTATTATTACAAAAAAACATTGCTATAAATCAGCAA 10783 30 100.0 36 .............................. ATGATGAGATGAGTTAAGATAGGTAATATCGTTCAA 10849 30 100.0 36 .............................. CAAAAATAAAAATAATATTAGACAAGGTTCTCAAAA 10915 30 100.0 36 .............................. TTGCTCACAATCACAGATGTTTCGTTCTCAGTAAGC 10981 30 100.0 36 .............................. ATAGTAGAATATATCGGAGACTTAACTTGTAAGTAC 11047 30 100.0 36 .............................. CAAATCATTTGACGTGCAATGAAGATGTAAATTGCC 11113 30 100.0 35 .............................. GTCAATAATGATACTAAAAAGAATTTATCTTTAAA 11178 30 100.0 36 .............................. ATTAAAGGAATCTCCTGAATGGGTTCAAGAATATAT 11244 30 100.0 37 .............................. TAAAGGATCCAGGAGATATAAGAATCAGTTGGTATTG 11311 30 100.0 36 .............................. ATATCAGTTTCTAATTTTTGTCGTATTCTCATTAAC 11377 30 100.0 36 .............................. ATCCAAATCCTAATACATTTAGGATTTCAACTAGTG 11443 30 100.0 35 .............................. TATATTAAGTTATCAAGTTAAACATAATATACTAA 11508 30 100.0 34 .............................. TTAAATCCTTATATAAGTATTGACGGAGGTTTTC 11572 30 100.0 35 .............................. CTGCATTAAAATATTTTAAACGTCTTAATACGTTT 11637 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 29 30 100.0 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : AAGCCATTTAGGCTTAAGGAGAAGATATAATGAGTAAAAAATTTAATTATAATTATGCATTTTTATTTTATGATGTGAAAGAAAAAAGGGTAAATAAAGTGTTTAAGGTTTGTAAAAAGTATTTAACTCATTATCAAAAATCTGTTTTCAGAGGTGAGATAACACCTTCTAATATAATAAAATTAAGAGAAGATTTAAAAAAAGTAATAGATGAAAGTGAAGATTTTATATGCATAATTAAATTATTAAATAATAAAGTATTTGGAGAAGAAGTGCTAGGAGTAGATATTGAAACAGCAGAAGATTTAATTTTATAAAATTATTTTACCAACTGCTTCGAAAAAATAAAACGGTCAAAAGTGTTGATTTTACTGGTTTTCTATGTAACTTAAACTGAAAAAAATAAGTTGTTAAAATTGGTTGGGAAAAAATTAATGAAAGTGTTTATTTTCAATAGGTTTAGGGGTATAATAGAAACAAGGAATGGCTATTTTACTATG # Right flank : TAGAAAGTAAGTAAATATTAATAGAAGTTGTTATAACAACTTCTATTATGAGAAGAATTGTTATAAAAGACATGAATGATAGATGTTTTTGAAAAATATACTCAAAGTTACTCAAAAAATGACTAATATACTCAAAAATTTAAAACACCCCTATAAGTAAAAACTTATAGGGGTGTTTTAATTATCTGGAGTAATTAAATCTATATTGTGTTCTTGAAAAAACTTAACATATTCTTTAGGTGGAAGCTTATCGGTAATAAAACAAGTGATATCTTCCAAATTACAATAAGTTTTAAGAGAAGCTGTATCTAATTTTGAGTGATCAGCTAAAAGTATTACATTTGAACTATTTTCAACTACTGTTTTTTTTACATCATATTCAAAATTAGATGAATTAGTAACTCCTTTATCAATAGAGAAACCTGTAGTGGCCATAAATGCTTTCGATATATTATAATTTTTTAGGAAGTTTGAAGCTTCTACACCGATTAAAGAATTAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 21513-22390 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMZT010000051.1 Clostridium botulinum D/C strain IZSVe-TV_3522_5_13 NODE_51_length_22553_cov_158.592_ID_164252, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 21513 30 100.0 35 .............................. TTATTTGTAGCTATAACATCTTTGCCACCATCACA 21578 30 100.0 33 .............................. GGGTTTTAGGACCTGTAAGATATTGACTAACAA 21641 30 100.0 36 .............................. ACATTTTTGTGTTTTAAATATTAACTTGCAGTTCTA 21707 30 100.0 35 .............................. ACAATAATCTGATTAAATGCATGGCGTGTTTGTTT 21772 30 100.0 34 .............................. TCCCAATGTGCCAATTAGAGTTGGTATAAGTGGA 21836 30 100.0 36 .............................. AATGCTTTAAGTGCTGACAAAAGTGGATTTAAATAC 21902 30 100.0 35 .............................. AAGTTGAGAAAAGATATAAAAAATGGAATTCTTAC 21967 30 100.0 36 .............................. GAAGAAATTCCAGAAGAATAAATCGTGCCTATGGGG 22033 30 100.0 36 .............................. AAACAAAAAGATATTAAGGAGGTTTCAAAAGGTACA 22099 30 100.0 36 .............................. ATATGAATAAGCATATGAGAGGATGAAAATAAAATG 22165 30 100.0 36 .............................. TGTGTGAATTTCCCTTTAAATATACATAAAGTCTTC 22231 30 100.0 34 .............................. TCATTCGTTGCTGCGAAAGTAGTATCTCCTTTCA 22295 30 100.0 36 .............................. TTTTCTTTTCTATTAATTCCATGATAATTCCTCCCT 22361 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 14 30 100.0 35 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : ATAAATAATGAGCCTTGGACTAATAAAATGGATATAGATTTATTAAAAAAGAGTATCAATGAGAATTTAATAAAGAAGATAAAAGTTATTCAGGATATAGATGAAATTTTAGAACATGATATGATAAAATCTATAAAATTAAAAAATAGAATGCCTATAGGATGTAAATACAAACAAATCAAACTATTGGGGAATAAATTTGAAATAGAAATTAAAGATGATGATATATCGCAATTCATGGCAAATATAGCTGTGGCAGTAGGAATTTTAGAAAAAAATTCTCTTGGTTATGGTTATTGTTTATACAAAAGTAAGTAAATTATTTTCCCAACCGATTTAAAAATTAAAACCAGCTATAATCCTTAATTTTACTGGTTTTGATATATGTTTAAGTTTCAAAAATGGCATTACTAAAATCGGTTGGGAAAAATATAATAAAAGTGTTTATTTTCAATAGCTTTAGGAGTATAATAAAAACAAGGAATGGCTATTTCCCTATG # Right flank : TTTTCTCTAATTAAAAATGGTCTTATGTCAATATCATGGACACGAAAAGTCAAACTTTTTTATGCTACACTTCTAGCTAATAATTCACATTGATCTGGAGTCATGTAATTAATAGAGGAGTGTAGTCTTTTTCTGTTATACCAACCTTCAATATATTTAAAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 1365-351 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMZT010000079.1 Clostridium botulinum D/C strain IZSVe-TV_3522_5_13 NODE_79_length_14183_cov_24.9878_ID_164306, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 1364 29 100.0 36 ............................. ACGGATGATTTGGCGGTGGTGTTGCTCTAAGTCTAT 1299 29 100.0 36 ............................. TTATTCTTCGCCCTCCTTAATAAATACAAAAGGAAA 1234 29 100.0 37 ............................. AAAGGTAGTTTAAGGCTTAGTGATAATGTACTACTTA 1168 29 100.0 39 ............................. GGGTGTTTTAAAGACAGATATTTTAAAATGGGTGCGTGT 1100 29 100.0 37 ............................. TTGCTTTCGCTTCACATCCGCCATATTCTTCTAAAAA 1034 29 100.0 37 ............................. GAATTTGTTACGTGTGAAAAGTATTATTATTTTATAT 968 29 100.0 36 ............................. TTTTGAGATTTAGCTGCTATAAAACCTAGTGCAATT 903 29 100.0 37 ............................. TTTTTTATCCCTCCAACATTATAATTCTTTTACTATT 837 29 100.0 36 ............................. TTATTTCTCTTAATTTCATTTCTTTTAACATTTTAA 772 29 100.0 37 ............................. TCATGCAAAACTTCACATTGATATACTTTCGCTCTAA 706 29 100.0 37 ............................. TCTAATACGTCTTTTGCTATTTGTAATTGCTCGTCCA 640 29 100.0 37 ............................. CGGTATCGGGATACATTTTTTTTAGTATCTTACATAT 574 29 100.0 36 ............................. CCAATTACTTGAGATATATTTTTGAAAATAGCTTTT 509 29 100.0 36 ............................. TACAGAATAGTATATAATTTCTTTCATTACTTTTTT 444 29 100.0 36 ............................. CTAAAACTTGCTATATATTGCATTCTGTACTTCACC 379 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 16 29 100.0 37 GTTTTATATTAACTATGTGATATGTAAAT # Left flank : ATTGAAGATGAAAAATATAAACCTTTAAAGGCATGGTGGTAATTGATGTTTGTTATACTAACATATGACATTGAGGAAAAAAGAATAAATAGAGTAAGAAAATTATTGAAAAAATATTTAATATGGACTCAAAATTCAGTATTTGAAGGAGAGATTACAGAAGGGAAATTGCATAAGTGTTTATCTGAGATAAATAAACACATTGACAAAAAAACAGATTCAATATACATTTATAGAGTTAAGATGAGCAAAAATATAACGAAAGACGTAATAGGTATTGAAAAAAGTTTCGATGAACTATTTTTGTAAATACAATTTGCAGTATTGCAAACAAATGTTCTCATTGCCTTAAAGCCTTGACATATCTAGCATAAAGGGTATTATTTAAGAAAAATCCAAAACACTACTTAAGGTTTACTGCAAAATTGCTTAAATTAGAGTTATAGCCGTTTGGTTCAAGGCTAGTAGTATCAATAGGTTCAGGTGTTTTGTATTTTAGG # Right flank : TTCATTTAAATCACCTCCCAATAATATTAATTATTAACAGTTTTATGGTTCTTTCCAATGTTTGTTGAGTAAATATTTAATTTATGATAAAATTACTTATAATTTGATAATACTAAGGAGTTTTTTATGGATGAATTTATAAAATTATTGGATGAAAATCTTGATTACATTAGTCATAAAATTATAGATGATACTTTTTATATACAAGATCAAATAATGATGTTTTAAAGTGGTTAAAGAGTTATCCTAACATTAAAGTAGTTTCTAGAGATGCTTCTATTACATATAAAAATGCTATTTCTAAAGCTCATCCATCTGCGATGCAGATTAGTGATAGATTTCATATGCTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGATATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 896-537 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMZT010000126.1 Clostridium botulinum D/C strain IZSVe-TV_3522_5_13 NODE_126_length_5736_cov_36.0809_ID_164398, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 895 29 100.0 36 ............................. GATTTTAATTTTAGTAATGTCGTTAGTATATGATTA 830 29 96.6 36 .........A................... AAATCAAATGGAGGGACAAGGATGGTATGGTTGTTA 765 29 100.0 40 ............................. TTTTCTAAGACAACGTTGAACCATAAATACCCGATATATC 696 29 100.0 36 ............................. TCTACAATAAGACTAAATGCTATTCCAACAACTAAA 631 29 100.0 37 ............................. GAAGGTACTGGTGCTTTATATAAAGATACTGCTTTAT 565 29 96.6 0 ................C............ | ========== ====== ====== ====== ============================= ======================================== ================== 6 29 98.9 37 GTATTAATAGAACTATGTTAGTTATAAAT # Left flank : AGGTTAGTTTTAATCATTTACTAGCGTTAATGATATTAGCATAGGAGAAATATTTGATAATATTTTTGAAAGTGGTGATTTCATTGATTGGATATGAAAGCTTATATAATGAAGACTATTTGCAAATAGGAAAAGGGAAGTAGTTTAGAGTAAAAATGTACATAAATACTTATTTTAATATATATATACAAATATAGAAAAAATTTAACAATAATATTGAAAAATAATTCTTAAATTACATAATTATAGTATAATAATAAAATAGAAGGGAGATGAAGATAATGGAATTCAAAAAATTAGTATTAACATCAAAAATGGCTCATTTTAAAAATGGAATTAATGGAAAAAATCAAAATACTTTTAGAGTTCCTCCCATATCAACCATAGTTGGTATATTAAAAAACATCTATGGCAAAGACATTAAAGATTTTATATTTGGATACACCTGCAAATATGATGGTATTTTTAAAGATGATAGTCAGGCATAATATGTTCTATTT # Right flank : CATAGAAAAACCTTCTTGTAATATTTTTAGTTCTGTTAAGTTATATGAACATTGATTCCTCTCAACCTATTGAAATATAATAGATTTTTCACAAATATATTACCTCCCAGAAAGGAGAGAGAAATCAATGAACAAAGCTAATAAAGAAATCATTTGTTCTGGTTGTTGCAGCCATAATCTTTTTAGGTTTGGAAAAGACAAAGAAGGAATGATCACTTTCTTACATTCCCATAGTAGCACATATATATATTCACGACTTTAGTTCAATAATTAATTACTAAACATTTATTATAAGTATCATTGGTATTGTAACTTAATAGGTCATATAACAAAGATATATATTAATATATCTTGAATATATATTAATATATTGGTAAATAAAGGAGAGAAGATATGAGGAAAGTAACGAATATATTGACATCATTAAATTTGTTTATTTTTTCCATATTAATTTTAATACTATAATAGTGCATTTTAAATTGAATAATTTTACAGTTAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATAGAACTATGTTAGTTATAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //