Array 1 170691-174082 **** Predicted by CRISPRDetect 2.4 *** >NZ_FCNH01000037.1 Acinetobacter baumannii strain J, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 170691 30 93.3 30 ............................GG AGAAATATTTTTTTTGAAAAATTATAAAAA 170751 30 93.3 30 ............................AC TCCTGAGCAATTAATACGCAAGAGAATATT 170811 30 96.7 30 .............................C TTGAGTGTAGCTCATTGCTTACTGCTAAAA 170871 30 96.7 30 .............................G CTTCATCATCATTTAGAGATAAATATATAA 170931 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 170991 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 171051 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 171111 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 171171 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 171231 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 171291 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 171351 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 171411 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 171471 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 171531 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 171591 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 171651 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 171711 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 171771 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 171831 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 171891 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 171951 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 172011 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 172071 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 172131 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 172191 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 172251 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 172311 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 172371 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 172431 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 172491 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 172551 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 172611 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 172671 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 172731 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 172791 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 172851 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 172911 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 172971 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 173031 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 173092 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 173152 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 173212 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 173272 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 173332 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 173392 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 173452 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 173512 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 173573 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 173633 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 173693 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 173753 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 173813 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 173873 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 173933 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 173993 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 174053 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 57 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.28, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //