Array 1 21249-21614 **** Predicted by CRISPRDetect 2.4 *** >NZ_QCZG01000025.1 Pueribacillus theae strain T8 scaffold25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 21249 36 100.0 30 .................................... TCATGCCGTTAGTGAAAACCCCTCTGCCTT 21315 36 100.0 30 .................................... GTTCTTTGCTGATACCTCGTTGAGAAGACG 21381 36 100.0 30 .................................... CAACCGTGTTAGATAGGCTCGGTTTACTTG 21447 36 100.0 30 .................................... AATAAAGGTTTAAGGTGCAATCTAACTGCA 21513 36 100.0 30 .................................... CCATGCGTTTAAGTATTCTTGGTTTTGGTT 21579 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 99.5 30 ATCGTATCACAGCAAAGTTCATAGGGGAAATATGGC # Left flank : ACTAGTATCTTTAAATGAGCATGTGTATGAGTAATTTCATGAGATTAATCGTATTCTTTGATTTACCTGTGGTCACTTCCATTGAACGTAAGCAATATGCAAGATTTCGGAAATTTCTTTTAAACGATGGATATACGATGCTTCAATATTCTGTTTACAGCCGTATTTGCAACGGCAATGATGCTGTGCAAAAACACCTAAAGAGGTTAAGGGAGAATATTCCAAATGTAAACGGTGCAATTCGTTGCATGAAAATTACGGAAAAACAGTTTGAAAATATGGAAATTCTTCTTGGTGTAAGAACATCAGAAGAAGAATTAGGTGCAAATAAAACAGATTTCTTCTAAAAAAAGTGCTTGCAAATTGATGCGAGTGCTTTTTTATTGCCGTTTAAATTTTTAAAGGAACCATAAATCATTAAATAACTTTAGTTATAAGTGTGTTTTTTCAAACTAGAAACCCCTTAAAAGCCAGTGATTTCAAGGGGTTTGGGGATGTGT # Right flank : TTAATTACTCCTCTGGTGTTCTATCTATAAAAAGGCGAGTTACTTCGGTGGAATTGCCTTGTTTAATTTTTTTTTAGTTGCTTTCTTTTCTAGAGAATCATGAGTATTCATGCCAGGTGCTACTGTTGGTTCATTTCTTTTTAAATTTTTATTATCCATACTTTTCGAGCTCCTTGTTTTAGTATTATGATTCCAAAAAACAAAAATTGTATTCAAGGATTTTGTTTTATTCAGCAAGCCCTAAATTGAATGGCTACACATTACGAAATTTAATTTAATTGTACCCCACAAAGTTCTTAGAAAAGAAGATAAAGTTTCATCAAAACGTACAAACATACGTACGTATTATGTTATAATAAATAGACAATAGCATAAAGGTTTCTCAAGGGTGGTCGGCAACATCCCCAGAACGAAAGGGGGTGGTGCTGATGACAGTGTTTGAAACATTGATGCTCATCTTTGTTTTCGCTGGGCTTATTATATCAATCCTGTCATTTAAC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGTATCACAGCAAAGTTCATAGGGGAAATATGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 105072-103116 **** Predicted by CRISPRDetect 2.4 *** >NZ_QCZG01000003.1 Pueribacillus theae strain T8 scaffold3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 105071 30 100.0 36 .............................. ATCCATGTGGCAACGGAATCAGTATCAGCTGATTCA 105005 30 100.0 36 .............................. CAAGTCAGATGACATTGACAATATGAGTCAGGAAGA 104939 30 100.0 37 .............................. TCAGCATTTGCCGGTCAATGAATCAGGCTGGCATGCG 104872 30 100.0 36 .............................. AATCAATAATGATATAGTTTCAAAAACGTGTGTTAG 104806 30 100.0 36 .............................. ATGATATTCAAGTTGGCAGACGTGCTAGGAAGGATT 104740 30 100.0 36 .............................. CGAGTCCAGTTGATTTCGCGATCAACTCTAAAGTGG 104674 30 100.0 37 .............................. TTGGATGCTGGCGGTAAAGGAGGCGGCTTTTTCTCAC 104607 30 100.0 37 .............................. CTCAGAATTGAAAACGGAAAATTAAAACTTGAATTGC 104540 30 100.0 36 .............................. GAGACGAGTTAAACCAGGTGCCTAGCGAGCCTTTTA 104474 30 100.0 36 .............................. AATCCTTTTCTTTCAAGCCGTTTCCAACCGCGCCGG 104408 30 100.0 38 .............................. TCAACTGGATCGCCTTTAGCCGTGGACCATTCGACATC 104340 30 100.0 38 .............................. TTGGTTTCTTACTTGTCCAAACGAGAGAATATTAGTTC 104272 30 100.0 38 .............................. AAAGCCAATGAGTCAGTAAGAATAAATGATGAAACAAA 104204 30 100.0 36 .............................. CCGATGACGAAGTAGCAGAAGCTGCCTTGCGTGCGT 104138 30 100.0 37 .............................. TTGAAGAGGCAACCACTTTCCCAAACGGGAAGCATGA 104071 30 100.0 36 .............................. ATGTTTCTAACTCAATTTCAATCGGCTGATATTGCA 104005 30 100.0 37 .............................. TAACTCGATTCTGCCATCTGGCAATGAGTCGTTTCGT 103938 30 100.0 36 .............................. ATGGTTTTCACGAAACAACTTTTTCAATTTGGAGAA 103872 30 100.0 36 .............................. TGGCGACGGATCTAACGAACAGCTGCAAAATGTTTC 103806 30 100.0 36 .............................. CATATTGCTCTGAACCGTCTATATAATAAAATTTTA 103740 30 96.7 35 .........................T.... TGTAGTTAAAACAAAAGAAGGTCAAACTTCTGTTT 103675 30 96.7 35 .............T................ CAAAGTTTAAAGAACCGAACGGACAGTTAATCATT 103610 30 100.0 37 .............................. GACAACAAGGCGAGTCATTCAACCTTCCTACACAGCG 103543 30 100.0 38 .............................. AAGCGATTGCGGATGTGGACCTTGTTGTTTTTGACGAC 103475 30 100.0 36 .............................. CAGCAAGCGCACGGGAATTAAACCGGGTCGTACAAG 103409 30 100.0 37 .............................. ATATAACTGAAAATCTCGCTGAAAAAGTCGCCAACTC 103342 30 96.7 35 ....T......................... GTAGCCGGCCGTTTCAGCGCGGTCTAGCATGTTGA 103277 30 96.7 36 ....T......................... AACGTTGCCTTTCAGGTATGCTTTGTAAAAAGTCAT 103211 30 90.0 37 ....A...........A....G........ CACTAGACACCTAACTCTCGCTCTTGCCTAATCTTCT 103144 29 90.0 0 .........................-..GT | ========== ====== ====== ====== ============================== ====================================== ================== 30 30 98.9 36 GTTTCCATCTTACCTATGAGGAATTGAAAC # Left flank : TGGTAATAAGCCACTTTTAAAAGTTGACTATCTTGAAATGAAAAAGATTGTTTGGGATTTTATTAATGAATGTGATCAATCAATGAAGTTTAAAGAAGGTCTAAAGGAATATGAGCAATTACCAAGAAGCTTATAATAATAGGAACTAAGGGTGCTATAATCATATCGAATTAGGAAGTATTAATTTATTGAGTCTGAGTCGATATTTTCGATAGAAAAAAAGTTAATTGCATTGGGTGCAAAAGTAAGTTATTTCATATACATTTCGTTCACAAAAATATTCCAATAGAGAAATCATTGGATTAGAAAAAGGGCATGTTGATTTTTCCATTTAAATATGTCGTCGATCCGTCTCATGACATTAACTGTAGGAGATCGACGACAAAAATTTTAAAAATGAGCGATAAAAGTAGTGCTATCAAGCCATTCAAAAAAAATAAAAGGTTACCTAACCTTTTATAAATGCTACTATAACATTAACAAATCTTTTATTTATCGGA # Right flank : CAGAATGTATTTACATAAATGGACATCCATGTTACTTATCATTAATCAATAGTAATATATCACTAAAAGGGGAAAATCATGAACCAAACAGAATCAATCATTCAAATAGACGCTGAAACTAAACATGAAAACACACATTATAACGATTATGCCATCGTCGTCCATGCCATTAAGCAAAGGTTGAAAAGGCACACAAACATATCGTTTCATATGTATAAAGATGATGAAAATGAAGAAGAAATATGGGACGTTGTGGAGGATGATCTAACCAACAATTCGTCTGAGGTGGAGCTCGTTTCACATGTCTATGATTGTATTGAAACGAAATCGATTCACTTAGAAAGGGCAGGAGGACAGCCGAATTTTCTAATCAAAAATTCTTTGTCAAATTCCGTGTATTATTATCCGAAATACAAAGTCGCCTTAGCGAGAATACCAGTTTTTCAAGCGCATTCTGATTATGAAATCGGATATGTATTTGCTGAGAATGATGAGGATTT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 121950-113269 **** Predicted by CRISPRDetect 2.4 *** >NZ_QCZG01000003.1 Pueribacillus theae strain T8 scaffold3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 121949 30 100.0 36 .............................. TCCGTGACGGCGCCGTTTTCTTCAATTTGCTTCAGC 121883 30 100.0 37 .............................. TCGCCTGAATACCCGTCCGAATAAAAACATGACGGCC 121816 30 100.0 36 .............................. AACTCTCCAGGTGGAGATGCCTTTGATGGAATCGCC 121750 30 100.0 36 .............................. AAGGTCGATGCAGGGGCAAGAATCGCTGTTGAAGCC 121684 30 100.0 38 .............................. GCGCCCAAAAAGCTGTTGAGATCGGGTTTGCTGATTCC 121616 30 100.0 37 .............................. TGACGACAGCATAGAGTTTTGGGGCATTGAAGAAGAA 121549 30 100.0 37 .............................. GTCGCTTTCTTGTGTGGAATGGATGGTTTAGGAATCA 121482 30 100.0 38 .............................. AGGAGTGATTCAATGCTAAGGGCTGTACCTAAACCTTC 121414 30 100.0 37 .............................. CAGAGTTAGAAACACACTATTGCGACGGTTGCGGTGA 121347 30 100.0 36 .............................. AAAAAGTTGATGTACTGATAAAAGAAGCTAAAGAAA 121281 30 100.0 36 .............................. TACCTTTCCTTTCGGAACCCTCGACCCAAGGCAAAT 121215 30 100.0 36 .............................. GAAACCCAATGTTCGAAAATGGTATATATATCTTCT 121149 30 100.0 38 .............................. ATGAGAGAGCGGGCTTTTCTTAGATCAGCAACAATTTC 121081 30 100.0 40 .............................. TTGCTCTCACTTTCTTGTTTAGGAGCATCGGCGCTGTCAA 121011 30 100.0 38 .............................. AAAATTGATGAATGAACGCTCGTAACGGGCGTTCATTT 120943 30 100.0 37 .............................. CCCGGACATCTGGTTTCGGCCCACGTTGGGGAACCAT 120876 30 100.0 38 .............................. AAGCATGAACACGCACTCGTGATTTTCTATAATTCCGC 120808 30 100.0 35 .............................. TTGAAATGCAGGAATACCAAGCTAATCATTTTGCT 120743 30 100.0 36 .............................. CGTCTAATGTTTGTATAGCTTGTAATAGTTCAGGTA 120677 30 100.0 35 .............................. TGTTCCGATCAGCAAACATGCCGGAAGGCGTTGAA 120612 30 100.0 39 .............................. AAAACTCAATTTCATAATGAACGCCTGCTATTTTTATTT 120543 30 100.0 36 .............................. AAACATGAAGAAGAAATAGAGTCTATCAGAAATGAT 120477 30 100.0 35 .............................. ACTATAATCCAGGCACGAAACGGGCAGATATCCAA 120412 30 100.0 38 .............................. ATGAATAGGGCTGACTTTCCGGTTATTCGTGAGTTTGG 120344 30 100.0 35 .............................. GCTGGCATGTGTAAGCCTCCTTTCAGATAGATTCC 120279 30 100.0 36 .............................. GAGCAATCCCAAATGCCATAGAACGCTTCTTTGAGC 120213 30 100.0 36 .............................. CTATATGCCAACCAATCTTTCTATTTCGCTATTGTC 120147 30 100.0 37 .............................. TCTGTTGGTAGTTCTTCTCGTTTCCATTTTTCATACA 120080 30 100.0 38 .............................. AGGGAGTCAGAGGACTTAAAGGATTGGGCTGTTGAAAC 120012 30 100.0 38 .............................. GTTGGAGATGCTGCAACTGGTGCTAATATGCCAATGTC 119944 30 100.0 36 .............................. ATGCGTGATGATGGTCTATGCCGAGTATGCGGAGGC 119878 30 100.0 36 .............................. ACGGTAAGAAAGTTGAAAAACCTAAAGAAGAAGCAG 119812 30 100.0 35 .............................. ACCACCGAAATAAATTAATGGAGATTTACTCATTC 119747 30 100.0 37 .............................. TATTTCACTTCAAGCGATGCTCGTTTTTGTTCTTTTT 119680 30 100.0 36 .............................. AACGTTTGTTCAAAGATTGCCACCGCCTTCCTTTGT 119614 30 100.0 36 .............................. CTCCAATCCGAAACGCTGTTAATGCAGCCAGAGAAC 119548 30 100.0 36 .............................. AACAGAGAAATAGTAAGCAGGAACGGCAGGCATCGC 119482 30 100.0 36 .............................. CCATCAACATAAACATAGGCTAAGAGACGGCCATAT 119416 30 100.0 37 .............................. CGGTATAACAGTTTTCAAACAGTGAATCATTCAGTAT 119349 30 100.0 37 .............................. ACAGTGAATGTAACACGTGCCGCCACTTCACCGTCAT 119282 30 100.0 37 .............................. CTATTCGATTGATTGTAATTGTGGATGGATTCTGTTC 119215 30 100.0 38 .............................. GTATTCATGGGCTGGCGTGGACTCAAGACTGTACGTTG 119147 30 100.0 36 .............................. TATATTTATAGAAATACGTCTAGATCAGGTCGCTCA 119081 30 100.0 35 .............................. CACGATCGAAATCGCTGAAACTGAAGGTTTGGCTG 119016 30 100.0 37 .............................. TTGGAAATATCGTTTCGATTCCAACGGCGATTGACAA 118949 30 100.0 37 .............................. ATTGCCTGTTTTTCTGTAAGCCAAATGGTTCGCTTAG 118882 30 100.0 35 .............................. CGTACTAATTGAAGGCATTAAGTTTGGGGTATACT 118817 30 100.0 36 .............................. ATGTTGTATAGTCGTTAGTTGAGAGTCCTTTTCCGT 118751 30 100.0 37 .............................. AATGCCTTTAAAGCTGATGCTATTCTGTCTTTTAAAG 118684 30 100.0 36 .............................. AATATTACGGACGTACGTTCGCCCGCGCGCGCCGCC 118618 30 100.0 39 .............................. TTAGATTTTTTTGGAAATTATGTCGGATGATAGATTCTA 118549 30 100.0 38 .............................. ATGGCCATGTCATTGCGCCGGATGTTGCTATACGCAAA 118481 30 100.0 35 .............................. ACTTTCGCTGATTCGAGATATTCTTTTAATGTTAT 118416 30 100.0 37 .............................. TCCGGAGATTGCAGATGAATTAAAGCGGAGCCAAGCA 118349 30 100.0 37 .............................. CAGAATATGGAAAATATATGCCGGAGGCAGCGCATGC 118282 30 100.0 37 .............................. ACCTACCGGACCTGTAAGAGCAGTAAATGCCGGTCCT 118215 30 100.0 36 .............................. ACGGTCTTTTAGGTGCTTACGAGGACCAGAAAGAAG 118149 30 100.0 35 .............................. CTGTTGCAAATGGAATTATCAATGACATGATCCGT 118084 30 100.0 37 .............................. CAAGAGGATTGCGTTTCCAGGTCTTTTCCCTTGCCTG 118017 30 100.0 36 .............................. TGCTGTAGGTGAACACAATGGAAAATACTTCTTTGC 117951 30 100.0 35 .............................. ATAGCCAGACAGTTGGCTATCAGTGCGAAATTGAA 117886 30 100.0 37 .............................. TCTCTCATGGCCAGCATGATTGATGATACCGACTGGC 117819 30 100.0 36 .............................. AAATCTTGATATATCAACGTATTTACTTCAAATACT 117753 30 100.0 37 .............................. TCTTTTGACTGTGTTTGAATTAGAGCCGTCAATATTG 117686 30 100.0 38 .............................. ACATTTAAAAAGTTTGCATAAACGCCGAAAGCCCGGAT 117618 30 100.0 35 .............................. TCAATCAAATCAGGGCCATTAAGAACGTTAAGTTT 117553 30 100.0 36 .............................. TTCGAAATTAAAAAGCGCACCATCAACAATCCGGAC 117487 30 100.0 37 .............................. CCGTCCATCACTCATTGATGGCCACCTCCTTAATATT 117420 30 100.0 36 .............................. ATGCTACATATACCGCGCAGCAGTATTTCAAAAATT 117354 30 100.0 35 .............................. CTGAAGGTGGAGGAAGCGCAATTGGTCAGGTTGTG 117289 30 100.0 37 .............................. TGTGATAAGGCCTAAAAATAAAAAGGCATTGCGTTTC 117222 30 100.0 36 .............................. ATACACTTGTGTCTCCTACTGGCGATGAGGACGACG 117156 30 100.0 38 .............................. CCGTTTTCTAACATCCAATAATACTCTTTGGATATACC 117088 30 100.0 37 .............................. CGATATGGAGGGATTAGATGACGACGACATCGAAATG 117021 30 100.0 39 .............................. TCAGGCAGGCGCTAGAACTTATCAAGGCTTTATCTCTCG 116952 30 100.0 36 .............................. ATGCTGAGGGCATTCAGACGCTTGCCGTCAGTCCCG 116886 30 100.0 37 .............................. CGTTAATGTTTCGATACTGACCAGTGCGTAAAGCTAG 116819 30 100.0 37 .............................. CCGCCGAGCTCACCATCTGCCCACATAAGCAATTCTA 116752 30 100.0 36 .............................. AGAGCAAAGGCTTGGTAGGGAATTGACTGAACTTGA 116686 30 100.0 37 .............................. ACACATTCCAAGCTCAGATGAATTTTAACACAAGTGA 116619 30 100.0 35 .............................. GCCGATTTGTATCAAGTTTTTAACCAAGAACAAAA 116554 30 100.0 36 .............................. CTTGTCTAAAAGCGACAATATTAGTTCTGATGATGT 116488 30 100.0 39 .............................. ATCGCTGAATCGAGTATCCTTTTCAGTGCCGCCTTCTGT 116419 30 100.0 35 .............................. CTGTTTTGGATACTTCCTTGTGGTCAGTTGGCCAG 116354 30 100.0 37 .............................. ATTGCAAAACTTAAAGAAATGATGAACAATCGTCAAA 116287 30 100.0 36 .............................. ACACAATGGTGGAACCGGATGACAAAGTTGAGTCTG 116221 30 100.0 35 .............................. TCTCTCGGTGTGTTTCCCTCTGACGCTGTTTATAA 116156 30 100.0 37 .............................. CACTTACGACGGTGTTCTGGCTGGTAAAGCGTATTTA 116089 30 100.0 38 .............................. AGATTATAAATTTTGGCATCCGTTATAGCAGCGTCCTC 116021 30 100.0 38 .............................. ATTGATGAAATGAGCGACTGACTGTAAACTAGCAGTCC 115953 30 100.0 36 .............................. CTTAATACTATCAATAATCGCATGGTGGATGAGTTT 115887 30 100.0 37 .............................. CCGGGAAAATCAGAATTGTGGATACGATTGAGGACCT 115820 30 100.0 38 .............................. GCCTGTTCTTTGGTCCGCTCGTGATAATCATGTCCGTC 115752 30 100.0 35 .............................. AAAAGTCCTTCTTGCAGTCAGTCCAAGTTTCGTAA 115687 30 100.0 38 .............................. CAAGGCTTGATATTGCCTTGACGCAAATGATGCTGGAA 115619 30 100.0 35 .............................. GCTGAACAAGCTGAAAAAGAAACCCTTGAATCGCT 115554 30 100.0 37 .............................. GACAAATTTAGAAAAGATAACCGTTCTAAAATGCAAA 115487 30 100.0 37 .............................. GCCGTCTTTGGTGGTTTTGGTACAGCAGTCATATGTA 115420 30 100.0 37 .............................. GCCGTCTTTGGTGGTTTTGGTACAGCAGTCATATGTA 115353 30 100.0 37 .............................. CCTCTACATGTTATAGAATACCTCCAAGAACGCTATG 115286 30 100.0 36 .............................. GAAACCACGACAACTTCGCCAACTCTCAATATGACA 115220 30 100.0 36 .............................. GAAACCACGACAACTTCGCCAACTCTCAATATGACA 115154 30 100.0 36 .............................. CATTTTGTCATTGCGTGCAACATTGCGCAAAGCATT 115088 30 100.0 37 .............................. GAAAGTTCATCAAACAAGTCCACAAAGACGCCAATCG 115021 30 100.0 35 .............................. TCTTGAAACCGTCTATCGTGTTTTTTGGAACAATG 114956 30 100.0 38 .............................. CATAAATCTGATAAAAAAATGGGACGTTAACGGTTCAA 114888 30 100.0 35 .............................. ACGAGAAGGAAAACAGCTGGTATCGGTTTGTAGAA 114823 30 100.0 35 .............................. CATCAAAAGCCTAACTAAAGAAACTGAAGAAATCG 114758 30 100.0 37 .............................. AGTAAAGCTACCTCATCGATGGCCAATAAAATATAAG 114691 30 100.0 37 .............................. TCCTTTGTTCGTGATTCTGCCAAATAGGCATGGTGTC 114624 30 100.0 35 .............................. AAAGACGACACGCAAACGGGCGATACATTTGTTTA 114559 30 100.0 38 .............................. CAGGATCAATACGTCCGCCGAGCTCACCATCTGCCCAC 114491 30 100.0 36 .............................. AAATATTTGAAGCGAGAATGCCACTAACAAATCCCT 114425 30 100.0 38 .............................. CAAGCTGTTTTGAAGTCAAAAGGGTATTAGGAGGGCTT 114357 30 100.0 35 .............................. TACTACGATAAACATACGTTACACATGGCGTACTT 114292 30 100.0 36 .............................. AAGGATATGCTTGATTACGTCTGGGAAATGCTCTCA 114226 30 100.0 39 .............................. TCCAATGGCAATTGTAAGAGGTGACGGAGTGTGATCGTT 114157 30 100.0 36 .............................. CGGTTCAAGGAAAATAGGAACATCAGTTTCCAAAAT 114091 30 100.0 36 .............................. AGGCCATATTTGTAATTACCATCTGCCGTTAGATGT 114025 30 100.0 37 .............................. CAAATCAGAAAAAATTGGAGACTATTCTTACACACTC 113958 30 100.0 36 .............................. ACTGAATTTGTTTGGCTAGCTTTTGCGTAATTCTAT 113892 30 100.0 36 .............................. AGGCACATAATTCGCCCGATCGCATTCCGGAAAAAG 113826 30 100.0 36 .............................. AAACCGAACTAACTAACCTTCAAAACGGCGACATAA 113760 30 100.0 35 .............................. AAGACACATCTTTGAAGACTGAACACTTTGAAGAA 113695 30 100.0 35 .............................. CCTTTAACCGGATTCGGAGGCCCGTCTGCCATGCA 113630 30 100.0 36 .............................. TACGAACTTGCAAGCCTTAGAAAAGAGTCGCCACGC 113564 30 100.0 36 .............................. GCAAGTGAAGCCGCAGAGCAGTTGGCAAGATTGTGC 113498 30 100.0 37 .............................. TCGTGAAGGAGATTATTTCACGAAAATCTACAGTTTA 113431 30 96.7 36 ................A............. TATGAAACTAGCGAAGCAGGCACGTCGTAATTATTC 113365 30 96.7 37 ................A............. TAACCATAAATTCGTGCAAATCGTGGTCAAATTCTAC 113298 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 131 30 99.9 37 GTTTTCATCTTACCTATGAGGAATTGAAAC # Left flank : TGAGCCGTATGCCTCTCTTTGGTAAATGGAAAGGGTGCTTTCATTGTTTGTAATACTTGTTTACGATTTTGGGCAAAAAAGAGTTGGCAAGGCGTTGAAAATTTGTCGGAAGTATTTACATTGGGTACAGAATTCGGTGTTTGAAGGGGAAATTTCAAGAGCTAATTTTGTAAAATTAAAAAAAGAATTAGAGAAGTTGTTGGATGCAGAAGAGGACTCAATCATTATATATACCTTTCGCTCTCAGAAATATTCAAAAAGGGAGATAATGGGAAGAGAGAAGGGGAATGTCGATTTTATGATTTGAAGAAATTGTCGTCGATCCTACTCACGACATCAAACCCAGGGGATCGACGACAAAAGGAAAAACAAAGATAATGACAGATATTAAGAGATAATCGCCAATTAAATAGCATTATTGAAATTTATATTTATAGAATAAGTGATTGATAAAAAGTTTAGAGGAGTATATTATTATTGTATTAACGCAATTTTTTTGG # Right flank : AGAAGATATACTCTATCGTTATTACTAGGTGGAAATATGACAGGTTGTTAAAACCACTTATCAAAATAAATTTCTATGTGAAAAGTTTGTGAATTTTTTCAATTTTGTGGGGGGATTTACCAAAATATGTCGAATATACTATGTCGAATATACTGTCGAATATACTATTATAAACACATTTAAAAATTACAAATTGTTAAGTTGGTTGTTTTTGAGTAGCATCGAACCAGTTTTATCTTCCGCAAACGTTTGTTTAAATCTATTTGGATCTTTAGCTAAAAGAAATTGGATTTAAAACGTCAAAAAAGGATGTGAATTAATGGATATAAAAGAATTAATTGGGAGAACGTCATTATTATCCTCCTCTCTAGAATGTCGAACGATAACCCCCTTACTTATGCACGGGGGAGATAAAGAAAAGCGTAGAGACAAGGAACAGCCTGCTAGCTCACAATTAAGGATCCCTTCGATAAAAGGGGTTATTCGTTATTGGTTTCGGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 131387-134261 **** Predicted by CRISPRDetect 2.4 *** >NZ_QCZG01000003.1 Pueribacillus theae strain T8 scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 131387 30 100.0 35 .............................. CTGGCGAAGAAATTCACAAAAAATACTTCATTACG 131452 30 100.0 36 .............................. CATGACACCTGAAAAAATTGAAGAAGTGCTGCTCAA 131518 30 100.0 35 .............................. TTGCAAATCTGGGTGCAACTGATAGCCTGTAGCTA 131583 30 100.0 35 .............................. TTAGAAAAGGTTAAAAATATCCATATTTCTTTGAG 131648 30 100.0 35 .............................. TAACTTTCTCCTTTTTGTCTAATGAGGAAACCTTT 131713 30 100.0 37 .............................. AAGGGAAACGCAAATTCAAAAAAGATGCGATTCTCTT 131780 30 100.0 37 .............................. TTGACAAGAAACTGTATTACCGCCCAGAGAACTTGAA 131847 30 100.0 36 .............................. CGTGGAGCGCGTGCACCACGGGTCCTTCCGGCATTT 131913 30 100.0 36 .............................. CTATCCGATTTTTGCACCATCTAACCTCATCTAAAC 131979 30 100.0 35 .............................. CCGAGCAGGAACAACAGATTAAAGAAGAAAAGCCA 132044 30 100.0 35 .............................. GTGATCAAAATAATGATGTGCCAAATGAACAAGAA 132109 30 100.0 35 .............................. TAACCCCTCTCAAGACCTACGATCTTTCGGACGAA 132174 30 100.0 36 .............................. CAGCGTTGTCGCTCCAATAGGATTGCAAAAGGACTT 132240 30 100.0 37 .............................. AAATATGCACCCATTTTCTATATCCTCCCTAAAACTA 132307 30 100.0 36 .............................. ATTGAGGAAAAAGGCCTTAGAAAAAACTTTGTTGCC 132373 30 100.0 35 .............................. CTGTGCGATCTAGGCGCGGCCACGGCGACTTTCGC 132438 30 100.0 36 .............................. TTTGTGACAAAAGTCCTCTTTCATTGTGAGTTTATC 132504 30 100.0 36 .............................. AAGTTAAAAAGGCCTGTCAGCGAACCCTTGGGCGCG 132570 30 100.0 37 .............................. TTTCCATAAAACCCCTCCTCAGTTGTGTCGCATCATG 132637 30 100.0 38 .............................. GCGGAAGCATCGGGGGATATTTTGGAACAGTTTATAAA 132705 30 100.0 36 .............................. CATGGAAAACCTTCAATTATAATGATGTGCCTAGAA 132771 30 100.0 37 .............................. TTGCTAGTCTGTACAATTGAATGATTGTACAGACAAT 132838 30 100.0 37 .............................. CCATGTCGTCTGTCTCGTTGTCTTCGTACTTCTTGAC 132905 30 100.0 36 .............................. CTAGACAAAACATTCCCAGAATGGGAAGTCTACCCA 132971 30 100.0 38 .............................. ATTTGTAAAATACAGGTTCATCCGGGTCGTCGTTTGCG 133039 30 100.0 37 .............................. GTGCTCAAGGCTTGCATAAAGGCAAGCAGACTATTGT 133106 30 100.0 36 .............................. CCCATTTCTTGCAAACGAGCGTGGGCGAGAGCATTC 133172 30 100.0 37 .............................. CGGCGCTTGCTGAATGGGAAGCTGCCAATATGTCAGA 133239 30 100.0 35 .............................. TATTGAAGATGATAGCCAGGCGAATTGGGCGCTCC 133304 30 100.0 35 .............................. AAATCAACTTGCTTCGTGATTTCAGGATGAATCAC 133369 30 100.0 37 .............................. ATAGCTGGATAGTCGAACAAATCAACGGTGCATTTAC 133436 30 100.0 36 .............................. AATTCGGAAAGAAAAAAAGCAAAGTCATAGCCAGAT 133502 30 100.0 37 .............................. TGTAATCAAACAGGTCTCTGCACAGTTCGTCATAAGA 133569 30 100.0 36 .............................. TGTTTCATATAATGAAAACATATCTGAACACATAGG 133635 30 100.0 37 .............................. AATACTGGTTCTACTTAGTGTCAAAGGCTGCCGTGTC 133702 30 100.0 37 .............................. ACGGGGCTGTCGACGCGAATAACGATTGATTTCCAAA 133769 30 100.0 36 .............................. AAACCGATACTAGACGGACGTGGCATGTCTATCCGC 133835 30 100.0 37 .............................. CCGAAATAGCGCGCGCCATCCTTCTCGATGATTTCCG 133902 30 100.0 37 .............................. TGATACAACAAACCCTAATGGAACAGACAAGTTATTC 133969 30 100.0 35 .............................. GGTTTTATATGATACTTAATCAAACCTAGTTTTAG 134034 30 100.0 36 .............................. TTTCATTGAAGCGACTGAACAGTCTGTTTACTTTTC 134100 30 100.0 35 .............................. TTTAATAAGTGAGAAGCCTTTCGGCTCCTCCTAAA 134165 30 100.0 37 .............................. TTAGTAGGCTTACGGCTAAGGAGTGGTAACAAATTAA 134232 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== ====================================== ================== 44 30 99.9 36 ATTTGCATCTTACCTATAAGGAATTGAAAC # Left flank : AAGATTTTTCCTAAGTACTTCTATTGTTTCAAACCCCTATTTCGAGATAAGATGTACATCTTCTTTAGAATAAGTTATTTTTCTTTAGTTTTCAAATGCCTATAGAAATAGCAAAAAGGTCTGGGCTACTGATAGATATTCAATGCGTCATATATTCTCAATATAAATGGCTGAAACTGATAAAATTGATTACACTAAAAAAATATATTCAACATACAGGAATTAGGACGTCACTTCTTACACAAGTGAGAAGTGTATCGACTTACCGCTATTTCGTTTATTTGGAAAATGCTTATGAAAGCTACTGATTGAGTAACAAACTACAGGAAAGGTTTTTTGATTTTCTCAATCGTCGATCCCACTCACAACATCAACCTTAGGGGATCGACGACAAAATGATTTTACTAAAACCTTATAATAATGGTGTTTATATGAAATATAAATTGATTAATTTCTTAAAAATCGATACCATAACAGTAACTTCTCTTTTATTTACCGGG # Right flank : TGTTGTAATATTAGATTGGCCATAATTCAATCGTTCAGCAGCTTTCGAAATATTCCCTAGCTTAGCAACCTCTACAAAAACTTGAAGATCATTAATGTTCATTTTGGTTACCTCATCCCTAGTATTAAAAATTTCAATACCTGTTATGATAAACTAACATTTTATTTAATGCTAAAATTCTCTTATAATTAAGTCAACTCGGGGAGGTGCTTATGAGACAAAAATTAAGCCCTATATATGTCACATTCATTGGTTTTTCCGTGTTGGCGATCGTTATGGGGATTGGCCGGTTTGCATATACGCCTATTCTTCCATATATGGAGCAGCAACACTTATCTTCGTATCAGGCTGGCTTGCTCGCAACGGTAAATTATGCCGGATATTTTATCGGTGCTTTTTTAGCAGGAAAGCTTACACAAAAGCCTGCTACATTGCTATGGATGATTGGGATCAACATCATTACTACATTGATCATGGGCCTAACAGATTCGATCGCGGTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGCATCTTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA //