Array 1 137202-137842 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIVY01000002.1 Streptomyces sp. CB02460 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 137202 29 100.0 32 ............................. CGGTTCGCGTGGGTCGATGCGCCGACCCCGCA 137263 29 100.0 33 ............................. GCGGCGGGGATGATGCGCTCGTACACGGATGCC 137325 29 100.0 32 ............................. GCCGGGCCGACCTTGGCCAGGTCGGTGAGGGC 137386 29 100.0 32 ............................. AACACGTCGTCGCTCGCCGGACTCGCGGACTG 137447 29 96.6 32 .....T....................... GCGAAGCTGTTCGCCCGCCTGTACGCGGGTCA 137508 29 100.0 32 ............................. TCGCGCTGAGTGGCGGCGGGAAACCGATCGTC 137569 29 100.0 32 ............................. GACCAAGGCCCCGGCCACCCCTCTGCGGGGCG C [137578] 137631 29 96.6 32 ............................T GACGGGTCGCAAGACGCTGTAACCGCAGCGGA 137692 29 96.6 32 .........................C... ACCCTGCACTCCGGAGTGCGCACGGAGTCTGA 137753 29 89.7 32 ...C.......G..T.............. ACCCGTATGGGGGTCGTGATTCGGGGCAGATG C [137762] 137815 28 82.8 0 C..C.......G..T..-........... | ========== ====== ====== ====== ============================= ================================= ================== 11 29 96.6 32 GTGTTCCCCGCACGCGCGGGGATGGTCCC # Left flank : CCGCTCCAGCAGCATGGCGTACCGGGCGTCGTCCCGTTCGTAGAGGGTGACGGCCCCGCGCCCACCCCAGGCGACGAAGGCGTCGGGCTCGTGATCGTTGCCGGGGTGCGGGAAGGAGACCTTGAGGACGGCGGGGGGCGTGTGGTCGCGGCGTACGGGGAGGATGACGCCGACGCCACCGTGGGTGAGGGGGCCGTCGGAGGTGCAGCCCCACGCGTCGACCAAGTCGCGTACGAGACCCGGCAGTTCCGCGATCCACCGCGCCCCGGCTTCGCCTTCACGCTCGACGGTGGTCCGCGCGAACTCCTCGGGAATGACGATCACCCGGGCACCATACGCGGCGACGGGCAGCCGCCGCTGCTGAACGGGGGCGAGGATAGGGGCGTTGGCCTAGGGCGGGGATGGATGTGTGTTGTGTGAGGGTTGCGGGGGATATGCCGGAGTGTGAGAAGGTGGTCAGAACCGGCCCTGACACGAGGCGAAGCCGCAGGTCACGAAGA # Right flank : CACGGCCACGGTGCGCGCCTCCTGGTCCTGTGCGGGGAGGGCGCCTCGCGGGGATCGTTTGTCTGATCGGCCGGCGTTCTAAGAGCGGTCTGTCAGCGGGGAGCCGTACGGGGGTCGGGCGGCGGGAGGTCGACCGGCCGCAGGACCCGGCCCGCGGCCGGACGTGCGTCGTCATGCTCAAGCGCCGGGCCTGAACGGCGGTGCGCCCGCCGCTGAGGGCGGCAGTGGGTGGCGCGGCCGCGTAACAGTGGCTGACCGGGGGCTCAGGCCGTGTCGAACTCTCCCGTTCTGACACCTTCCACGAACGACGAGAACGCCTCTGTGGAGACCGACAGCCCCGGGCCGCCGGGCCGCTTGGAGTCGCGGACGGGAACGGCCCCCGTCGTCGTGGCCAGGTTCGCGGCCACCTCGACGCAGGCACCGCCGTTCGAGCTGTACGAGGACTTGTACCAACGGAGGGGTTCGGTCATCGCGGGAGTCCCATCGCATCCGGCTGCTGT # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [2,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCCCGCGCGGGGATGGTCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 141309-141459 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIVY01000002.1 Streptomyces sp. CB02460 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 141309 29 100.0 32 ............................. GAACTCGTACCGGCCTGGCCGACCCTCCTGGA 141370 29 100.0 32 ............................. TGAGCCTTGATCGACGCCCAGGCGGGCTTGAT 141431 29 93.1 0 ......................C.A.... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 97.7 32 CTGCTCCCCGCACGCGCGGGGATGGCCCC # Left flank : GGCCCTGTCGGCAGCCGACCGCTTCAGCTCGCTGACGTTTGTGCTGGGTCTTCGGGTCCCCGCGTGCACGTACATCGCCGCCGAGAAGGTGCGGGGCGCTCAACCTCACTGGTTCTACAGCCGAAATGACCGGTCGTGGGCGTGTGTGCTGGTGGAGGACGGACGGCCTGCGGCCCGCGTGTGGCAGCGGGGGCGGCGGCGGTTGTGGGATGAGGTGGAGGGTGCGTATGCGTGGTGGGTGGAGCGGGGGAGGCCGGGGTGGGAGCGGTTTGGGGTGACGGTGTGGGAGGAGGGGGAGCGGGTTTGGGTGGATGAGGTGGGGGAGTGGGTGTAGAGGGGCGGTGCGTTGCGGGCTGACGGGAATGGGGCGGCGCGAGTCGGTAGTTGGCCTAGGCTGTGGGGTGTATGCCAGCTGTGGGGTTGTTGAGGTGGTTATGCCGGAGTCCGCGAAAGTGGTCAGAAACGCCACTCACTCGAGACAAACCCGCAGGTCAGGCAGT # Right flank : CCTCAGCAAGGAAGGCATCGCCCCGCCCGCGGAGACGGTCCCGCCGCAGGCCCGCTCAGGCAGTCCAGGGCGATCTTCTAACGCGGGGAGGGCCCCACCGCGCCCGGATGGACGGTGGGGCCATACGCCGGACGGCTCGTTGCTCAGGACTGCTGGCTGCCCGCCTGCTTGACGACCTTGTCCGTCACATCGACCGTGTCCCCGGCAGGAGGCGCGTCGACGTCGACGTCGGTCCCGAAGTCGCTGAAGTCCATGACGACCTTCGCCTTGCCCCGGTTCGCCGAACCGGAGTCCTTCGCGCCCCCGGCCGGCTGCGCGGCGATCTCGATCTGCTGGCGGCGCATCAGCCCCTTGCTGTCGACCCAGAGGTCCACCGGCACCGTCTCGCCTAGCTGTTCGCGCAGCTTCCGGGCCTGCTCGGCGTTGCCCTTGGCGAGCTTGTCGATGTCCAGGGCAACCTTGTAGTGGGTCGTCTCGACACCGCCCAGGTTCTCCGTACC # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGCCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 142768-142978 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIVY01000002.1 Streptomyces sp. CB02460 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 142768 29 100.0 32 ............................. GACCAGGTCAAGGTGACCGGGTCGATCGAGAT 142829 29 100.0 32 ............................. CAAGTTCGAGGGAAACGGAACCGACGAGGCCA 142890 29 100.0 32 ............................. GGCCGGGGCGGGCGCACTGCTGGTCATGCGGC 142951 28 82.8 0 .....................-C.C.AA. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 95.7 33 CTGCTCCCCGCACGCGCGGGGATGGCCCC # Left flank : GATCTTCACGCGCGCGGACCCGGCCTCGGTGGTCTTCTTATTGGTCGCTTGTACGACCTGCGAGGGCGACGAGTCGGCCGTCTTGCCTGCCCCGGAGGGCTTCGCATCGTTCGCGGCGTCGCCCTTGTCGTCCGACCCGCAACCGGCAAGCGCGGCAACGGCCAGCAGGCCGGCCACCCCGTACGCAGCCGCCCTGGTCCCCCGGGTCTTCACATTCGTCATCACAGCAGCCTCCCCAAACCGAAACCGTTACGTCAGGTATGCGCCCGGTGCCCGGAAGGTGATCCCGCATGCGAAGTGTCTGCCGTTCTACGTCAGCCGCAGTAGTTCGCGTCCAGGCGGGCTTGCTGAGGCGTTCGGCGAACGGGTCGGCCATCCAGAGGCGTTGGCGTACCCTTGCCGCGTATGCCTGACGTGTGATTGTTGAGATGGATATGCCGGACTGTGCGCAAGTGGTCAGAAACCGCGCCTTCACTCGATAGACCCGCAGGTCACCGAGT # Right flank : CAAGGACGTGCGGCTTCGTCCGGGGCGGTCTTCGTGCTGCCCCCGCCCGGCTACGCTCGCCTCCCATGACCGCCGACCTGACGTCCGACCTCATTCGCGGCCTGCTTCGCGACCAGCACCCCGACCTGGCCGGTCTGCCTCTCAGGCTTGCCGCGCGTGGCTGGGACAATCAGGTGTGGCGGCTGGGGGATGGGCTCGTCGTGCGGTTGCCGTGGGCGACCTCGTCCGCTGATGAGTTGTTGTTGAAGGAGCATGCCTGGGTGCCCGGGCTGGCTCCGGGGCTGCCGTTGCCGGTGCCCGTGCCGCAGCGGCTCGGGGTGCCGTCCGACCGGTTTCCGCGGCCCTGGTTGGTCACCACTTGGGTGCCGGGGGAGCCCGCTGACCGGGTTCCGGCTACGCGGGGCGAGGATGCGGCCGACGCGTTGGCCGGGTTTCTGAGTGCGCTGCATCGGGTGGCTCCGGACGGCGCGCCCGTCGGGCGGGGGCGCGGGGGGCCGTTG # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGCCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //