Array 1 643901-637834 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT629804.1 Arcanobacterium phocae strain DSM 10002 chromosome I Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 643900 29 100.0 32 ............................. TAGCGTGTATTTCCCGATATCTGCATTACCGC 643839 29 100.0 32 ............................. TCGTGCATCGTTTGTTAATCGTAGTGCTGAAG 643778 29 100.0 32 ............................. TAGGTTCGCAATCGCGATAACAATCGCTGCCG 643717 29 100.0 32 ............................. CTTAGCGGGTTGCCGTTTGCCCCCCCGTGTAC 643656 29 100.0 32 ............................. TGACACGCTGCGCAGCGCACCGTCTTTCAAAA 643595 29 100.0 32 ............................. ATCATTGCGGGTGGAAGCCCGTGCCAAGATCT 643534 29 100.0 32 ............................. TACATATACGCCGCCCATAGCAACGGCTGCTA 643473 29 100.0 32 ............................. CTTAGTCCTACCGGTTGTAAGTGAAATCTTAG 643412 29 100.0 32 ............................. GGCGGCTCCCCACGGGCTTATGGCGTCGGAGT 643351 29 100.0 31 ............................. GACCCAGCCGGGCGCTGGCGCGTAACCACAG 643291 29 100.0 32 ............................. TAATTCTATTTGGATCAGTCTGTAGCGGCCGT 643230 29 100.0 32 ............................. AACCACTGAAACAATCGCCATAATAATAGGCG 643169 29 100.0 32 ............................. AGAAATCCGCATATTAGGCGGAGACTATCGCA 643108 29 100.0 32 ............................. GTATTCAAGGACGAAACGAACTTAGACGACGT 643047 29 96.6 32 ............................A CTTTTTATTGGGAAGCCAAGGAAAAATAGAAG 642986 29 100.0 32 ............................. TAACCAGCGACGAAGTAGACGCGCTCGCGAAT 642925 29 100.0 32 ............................. AACTCATTAGCCTAGTTGATCTGGACGTTGAT 642864 29 100.0 32 ............................. AGGTATCGGATCAGGGCTACTGATTCGTCTAA 642803 29 100.0 32 ............................. TCGCATTCGGCGAAATCGACACCCGTTGGGTA 642742 29 100.0 32 ............................. GTCCGTTTTTGATTTCTTGCCAGTCTTTGCCG 642681 29 100.0 32 ............................. GGAGTAGTACCGCAACAAGCCGCACTAGCGCT 642620 29 100.0 32 ............................. GCTGATTTCTTGCGCTTTTACCGAATCGGTGA 642559 29 100.0 32 ............................. GATGACTGTTTACGCGACTGTTGAAGATTTAG 642498 29 100.0 32 ............................. CGCCAAGATTTCGAGTTTCAATCTTAAAAACA 642437 29 100.0 32 ............................. TCGAAATCGTCAAATACGCCATCCGCGATCTC 642376 29 100.0 32 ............................. TATCACTGGTGCGACGATTATCGGTGCGACTA 642315 29 100.0 32 ............................. GGCACAGTACGCTGCGCTTACCGATCGTATGA 642254 29 100.0 32 ............................. GGCACAGTACGCTGCGCTTACCGATCGTATGA 642193 29 100.0 32 ............................. GCTCATTGATCGGATACCCAGACTGGTTACGC 642132 29 100.0 32 ............................. GATACAAAAGCCGGTACACACACAGGTACACA 642071 29 100.0 32 ............................. GATATTAAGCGCGGAATCAGCATTTACCTAGA 642010 29 100.0 32 ............................. GTGTTGAAGGAGATTTTCGGCGAGGCTAATGT 641949 29 100.0 32 ............................. TACGATAAAAACGGCAAACGTAAAATGCTAAC 641888 29 100.0 32 ............................. ACTTACACCTACAAGGGAAGATACTAGCGCAG 641827 29 100.0 32 ............................. CGACGCATCCTCGGTGATCCTAACCGCATCAG 641766 29 100.0 32 ............................. GTAGAGATTTGAGTGTTGGTCCGGTAACACAC 641705 29 100.0 32 ............................. CAACCGGCACTTAACCGGCACTGCCGTTTTAG 641644 29 100.0 32 ............................. TCTAGCCCGGTTAGTTTTTCGTATTCCATCTA 641583 29 100.0 32 ............................. GCGGATCTATGCGTTATTCAAAGATTGGCGTC 641522 29 100.0 32 ............................. AATTTTACGGCTGGAATCCTAGTAGCCGCGTA 641461 29 100.0 33 ............................. ACTTTTAAGAATGGTGTTATTTCGGCGTTGGCG 641399 29 100.0 32 ............................. TCCGGAGAAGCCTGATGAAGCGCCAGCGTTTG 641338 29 100.0 32 ............................. GTCCAGATATGGAAAGAGCCACCCCAAGACAA 641277 29 100.0 32 ............................. AACCACACCGACAATAGCAAGGAAGTTAGCCA 641216 29 100.0 32 ............................. TTCTAATCCGTATAAAGCTAGTGTAATAGCAA 641155 29 100.0 32 ............................. ACACCTACCGTGCAGGCAAGTATCCGCACCGT 641094 29 100.0 32 ............................. ACCTATATTAGTTACTGGAGCCCTTAAACAGG 641033 29 100.0 32 ............................. CGGGCATTGGGTCGTCTACTCGGAGATCTTAC 640972 29 96.6 32 .................T........... TGGAATCATTAGCGGCGTTTTCCTCGGCAGCG 640911 29 96.6 32 ............................T AAGTAATGGAGAATCTAGCAACAATCGGTACA 640850 29 100.0 32 ............................. GAATATGTGGTCGGGTGTTCGATTGCTTTATT 640789 29 100.0 32 ............................. GCCTTGGCTCGCTTAGCTATTTGGACTATGAG 640728 29 100.0 32 ............................. CGGTACACAACGTGAGCCGATCTTAACCCTCA 640667 29 100.0 32 ............................. TGCCAAAGCCAAAGCGCAATAGATTCGGTTTG 640606 29 100.0 32 ............................. GATAAATTTTCTTTCCGGCAAATATGGATCCA 640545 29 100.0 32 ............................. TTATCAAGATCTGGCTTGACTGCTGGCAAACC 640484 29 100.0 32 ............................. ATGTGTGAAATGCACGTCGCGCGTTTCCCTGG 640423 29 100.0 32 ............................. GCTAGAAATAATCTTTTCGAGCGAAGCCCGAG 640362 29 100.0 32 ............................. AAGAGAAGTATATGCACAAACTTACCGGCACT 640301 29 100.0 32 ............................. GTTTATTTATCGAGTAAAAACAACATCTTCAC 640240 29 100.0 32 ............................. GCCAGTGTAGATAAGTGCGCGAACGCCAGATA 640179 29 100.0 32 ............................. AACGAAAGGGAATGGTCCCGATGTGACCTTAT 640118 29 100.0 33 ............................. TGATAAGTTTTCGATTGCCCACTGATTTAGTCT 640056 29 100.0 32 ............................. ATACGCGCGGTTGTCCCGTCTGGATTCCACGC 639995 29 100.0 32 ............................. CTTATAGAAGACTTGGCGGGTTGGACGCTGGT 639934 29 100.0 32 ............................. AACTGTGATCATTTCTTCACCTCTGAATTAGG 639873 29 96.6 30 ............................T TTTGAAGCTACTCCAGCTAATACACCTTTC 639814 29 100.0 32 ............................. GGACATCCAGAAACGCAAATCATTGCTACCGC 639753 29 96.6 32 ............................T CGCTTAGAATCGTGGTGATGATTTGACCGGCG 639692 29 100.0 32 ............................. ATAAGTTCCCCTTGTGCGATGTTTCTTTTACG 639631 29 100.0 32 ............................. ATAAGTTCCCCTTGTGTGATGTTTCTTTTACG 639570 29 100.0 32 ............................. GGTTGCAGACCGAGGTCCTAGTCGCACGCGAC 639509 29 100.0 32 ............................. AGGACAGCACCCCGCAGGCTAGCACCCCGCAG 639448 29 100.0 32 ............................. GCTCATCCCTGTTAAATCTGGAAAGCTCGCCG 639387 29 100.0 32 ............................. ACCTGCATACTGCGAGTAGTATTCACGAGCAA 639326 29 100.0 32 ............................. GAGATGCTTGAACTCTTGCGCGTCTTTGAGTG 639265 29 100.0 32 ............................. AAACACTTTACCGTCGGACGCGACGGTCACAA 639204 29 100.0 32 ............................. AAACGATATTCCAGCACCAACGCTCAAAGATC 639143 29 100.0 32 ............................. GTGGATCGTCCTTTGGAGAAAGCTTCTGATTT 639082 29 96.6 32 ............................G TTGAGTTAGAACGGTTGGACGCTATTTTTAAG 639021 29 100.0 32 ............................. ATCATTTCTAAAGATATTAGATTCCGTTCTGG 638960 29 100.0 32 ............................. GCAGCACATGGCGTTAGGGATCGCGCAGTTTA 638899 29 100.0 32 ............................. AAGCGCATTAAGGTTACGCTGCGTTTTACGGG 638838 29 100.0 32 ............................. AAATTAACTGGCGCTTTCAACGCTGCCAAAGA 638777 29 96.6 31 ............................G TGGCTTTCCCAAACACCTTTAAAGAGAGAGG 638717 29 96.6 32 ............................A CTACGCGGCCTTGGCTCTGCGGTGAATCAAGG 638656 29 100.0 32 ............................. GACGATCCTCTGTCCCATGTGTCTTAGTCCGG 638595 29 100.0 32 ............................. AGGACTTTCGGCGCGTCCTGCTCAACTTTCGC 638534 29 100.0 33 ............................. AGGCCGCGCGATTGGAAGAACCGGCTGGAGTTG 638472 29 100.0 32 ............................. AAGCGCATTAAGGTTACGCTGCGTTTTACGGG 638411 29 100.0 32 ............................. AAATTAACTGGCGCTTTCAACGCTGCCAAAGA 638350 29 96.6 32 ............................A CTACGCGGCCTTGGCTCTGCGGTGAATCAAGG 638289 29 100.0 32 ............................. TCAACCGAACCGCCATTAGCCAAAAGAATCGC 638228 29 89.7 32 ..........................CGG CGCAGAAATTACTTTCACTTGGATCACCAACG 638167 29 100.0 32 ............................. GTGGAATGAGCAGTTGTTTTGCCCGTATGGGT 638106 29 100.0 32 ............................. TTGTGAACGACGCCGGCATGCTGCTTAAAAAT 638045 29 100.0 32 ............................. ATCGAGAGATAACTGTTTACACGCTGTCTCGA 637984 29 100.0 32 ............................. ATTCATGGTGATTGTAGCCTATGTTATGACAG 637923 29 100.0 32 ............................. TGTACGAGCAGTAACAAAAGGTATTGGCTTAA 637862 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ================================= ================== 100 29 99.6 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCACAACAAGCATATATTGGAAGATATGCTTGGAACGCTCATGGAAATTCTAGAGCCGCACCTGCCAAACCGTGATGATGACCGTTTGATCAACGATCACGGTGAAGTTTCTGGGCATGTCCAATATGGAAAAGACGATGAATGATGTTTGCAGTCTTAACAATATCCGCAGTTCCCGAGCATCTTCATGGGTACGTGACCCGATTCCTCACTGAGGTTGAAAGTGGTGTTTACGTTGGAAATATTTCACGAAACGTTCGTGAACGCTTGTGGGAACGTGTGAGCACTACGCTCGACGAAGGAACTTCTACTATGATTTATAACGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACCTGGACGGCCTGACCGTTATAGCTATGCGTCCCGGACGTGGAAAATCCAAAATTCGAAATCGTTGAAAATAAAGGGTTTCGTTAGT # Right flank : TTGTTGTCTTTAATTTCGATGGAGTGAAGTGTACCGGGTTTTCTTCCTAGGCTTTTGCCCTGGTTGGTGTTTGTATTTTCTGTGTTGTGTTAACGGTGTACCAGTAATCGTTTTCAACTTCGAGCGGTGTGCGGTAGTCGAGTGCTTGATGTAGCCGTGTCTTATTCCACCAACTTACCCATTCAAAAGTAGCGATTTCCACTTCGAGTACGTCTTGCCATGTACGAGGATGAATAAGCTCGTTATTTATAACAACCATTGACATTCCCAGCTAAAGCATTATCGTAGCTATCACCCACGCTACCGGTTGAGGGAATAATCCCTCCCCTGTGCTAGGTGCTCGTTATACACAATCGAAACGTACAGAGAACCATGCTCACCATGATCTACTAGCCCGCACCTCCTTCGCACAAGCAATTACTTGGTTTAACGCCTGGTAAAGCCTGGGTTCGCATAGAATCCAACAACCCCCACCCCACGATCTTACGGCTGAAAACCTC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //