Array 1 3155-4736 **** Predicted by CRISPRDetect 2.4 *** >NZ_RFBK01000119.1 Acinetobacter baumannii strain TG15464 Acinetobacter-spp-TG15464_2358, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3155 28 100.0 32 ............................ TTCTACTCCTCGAAGCTCGTCGGCGGCGTCCT 3215 28 100.0 32 ............................ TAACGTGGTGTGAGCCGAGAACCTGCAAGCCA 3275 28 100.0 32 ............................ TTTTGATGAGCAGGTATTTACACAATATAAAT 3335 28 100.0 32 ............................ TGATCAAGAATGATATGTACTAGCTCACTATC 3395 28 100.0 32 ............................ TTCGAGTCATAATTATAGTAAAAAGTCATCTT 3455 28 100.0 32 ............................ TACATAAAAATGCGGACCCAACGATAAGGATT 3515 28 100.0 32 ............................ ATTAATCGAGGAAAAAAAACATGAATGTTAAT 3575 28 100.0 32 ............................ ATCACTTAACCCATCATCAATAAGTTGGCCTT 3635 28 100.0 32 ............................ AGTCACCATTGTTCGAAGCTGTTGGGTCATTA 3695 28 100.0 32 ............................ TTGTTGCATCATTTGCGACTCATGACTATTTG 3755 28 100.0 32 ............................ AAATACAAAGTTAGGTATTGGTACTGGTGAAA 3815 28 100.0 32 ............................ AATATCCACCAATGATTTTGGTAAAGATAGAG 3875 28 100.0 32 ............................ AGACACATACGTAATGGTGTCAATATCGTATA 3935 28 100.0 32 ............................ TGCCCCAGCGAGCAAACGCCTTAAAAATCCTG 3995 28 100.0 32 ............................ GAGATTTTTGTGCGCTTATAGAACATGAGCTT 4055 28 100.0 32 ............................ GTAGGGATAGTGAGATTGTAGACCTTACAATG 4115 28 100.0 32 ............................ CCGCAGATTTACGGATGCCTGTAACTGTCATG 4175 28 96.4 32 ...A........................ TATCATGAACATTGTTCCTTGACCCACGGGCA 4235 28 92.9 32 ...A.....T.................. ATTCGATAGACTGATTCTATAAGCTTATTTGC 4295 28 100.0 32 ............................ TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 4355 28 82.1 27 ....C......TCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 4410 28 92.9 32 ....C....T.................. AAACAACGAGCCTTGTCGCGGGTCGCCCATGT 4470 28 96.4 32 ...A........................ CAAATCAAAAGTGCAGTTGCTGCCTCAATAAC 4530 28 96.4 32 ...A........................ TCTTCATCTGTTACATATGAAGCAAGGATCTT 4590 28 92.9 32 ...A.......T................ GTCAAACGACAGGGCTATAAACACTTAATCTT 4650 28 96.4 31 ...A........................ ACATTCAAAGAGGCTCATCGAATCCAATCGA 4709 27 78.6 0 A..T........TC........C.-... | A [4713] ========== ====== ====== ====== ============================ ================================ ================== 27 28 97.2 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCCTCATTTAATAAAGTTCGAGCACTAAGATAGGGTAAATCAAGTGCTTGCTGTTTACTTAAACGAATCCCGCCTTTTTCAATATTGGAGTTAATCGTCTTTAAACTAAAGTGTACTGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGGTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : ATTTCTCTTTCGAAATTTAAAACGACATGTTTTGTCGTTAAAAGGCCGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAATATTATATTTTTATTACATTCGAACTTTAACAATAAACTATGCATGTCATTCTCATCTCTGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCGATTGTGGATAGCTATGCTATTCGTACAGGACATTCATCTTGGCAAGCACCAATGACAATGGAAGGTTTAAAAGAAATTCGTAGCGCATTAAAAAAAGTAGCCACCCGACAAACTGCGGTAGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTAGGAGCAAAGCATAAATTTGCAAACGATGGTGCATATCCAGTTGCATCGACCAAAAAACAACAAAAACTACTAATGCTAGATGAATGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGGGACATGCATGATATCGGTAAGGCC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2064-5213 **** Predicted by CRISPRDetect 2.4 *** >NZ_RFBK01000043.1 Acinetobacter baumannii strain TG15464 Acinetobacter-spp-TG15464_2282, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2064 29 100.0 31 ............................. ACAGGTTTTGCTTCTAAAACCCGAATTAATG 2124 29 96.6 31 ............................A TAAAAATCTTGAAACTTCCCTCTCTGATTAC 2184 29 100.0 31 ............................. ACAGCCCGAATCCAGGCTAGAACCTCATTTT 2244 29 100.0 31 ............................. CTATGGAAAGCCTGGATGAAGCATGTACTTA 2304 29 100.0 31 ............................. AAAAGTTCTAAAACAGTAGTATTCGCGTTAG 2364 29 96.6 31 ............................A GTCTTTGCCAAGTATGTTAAAGACCCAGCAC 2424 29 96.6 31 ............................C TATTTATTTAAAAACATTAAACGATTTAATT 2484 29 96.6 31 ............................A ACTGTAGTGGGTCATAAGGAGATTTAGTTAG 2544 29 96.6 31 ............................C AACATATGGAATTGCAGCAACCGATGCATAA 2604 29 100.0 31 ............................. AGTTCATCAAATGAAACTAACGCTTCCCATT 2664 29 96.6 31 ............................A CTCAGGCAATTGTTGGGAAAAGTCGATTTCT 2724 29 100.0 31 ............................. GTTTCAAGGTCTCGGATAATTCCACATTCAT 2784 29 96.6 31 ............................A TATACATCGTTATTGCATTCTGCATATCCCA 2844 29 96.6 31 ............................A TTAAGAGAGGCTTGTTTAGATCAATACTTGC 2904 29 96.6 31 ............................A TAACAGGTCAAGTTACTGTTGACCCGGTAAA 2964 29 96.6 31 ............................A TAACCAAAATGAGAATAAAAAATTCTTTAAA 3024 29 100.0 31 ............................. TCACCTGTAGTAACAGTTGTTAGATAACCCA 3084 29 100.0 31 ............................. CTGGAGTCATGGGGGCTAATTTATTTAAACG 3144 29 100.0 31 ............................. TATCCCTCGATCTGCTGTAACGTGGTGTGAG 3204 29 96.6 31 ............................C CAAGGTGTGCGCACCAAAGCAAAACCAATCT 3264 29 96.6 31 ............................G CCCACAGGTTGAGCATCAACGGCCATCGAGA 3324 29 96.6 31 ............................A TCATAGAGCTCACTTTGTCGTTGAGCCTGCA 3384 29 96.6 31 ............................A TCATAGAGCTCACTTTGTCGTTGAGCCTGCA 3444 29 100.0 31 ............................. TGTAAAACCTCTGGATTAAGCATTGCGTTCA 3504 29 100.0 31 ............................. CTTCCTGAGTTTTAATCCCATTTGCCTTACA 3564 29 93.1 31 ......T.....................A AAATGACCATCAATCGACAGTGGTTTACCTT 3624 29 96.6 31 ............................C ATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 3684 29 96.6 31 ............................A GAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 3744 29 96.6 31 ............................A ACACGTTCTCTATATCGCTGTTTGCGGTCAT 3804 29 100.0 31 ............................. TCAGTTGGATATGCCTTTGATACCAAGAAAC 3864 29 100.0 31 ............................. CTCCCCCCTCCTCGATCGGCTGTGAAAGTAC 3924 29 100.0 31 ............................. TTAAATCGTCATATTAAGGCGCAGTTCCGAA 3984 29 96.6 32 ............................A AAGATCTGACCAGCTAAAACATTCTGGTTATC 4045 29 100.0 31 ............................. AGAAGCAGAAAATATCCAACTCATTGCTACT 4105 29 96.6 31 ............................A CATGGGAGCTTTCATTCATATATGTCATTAG 4165 29 96.6 31 ............................A CGTCCACGGTAGCGGCGCCAAGGCTGCCAAT 4225 29 100.0 31 ............................. GTTTTGCTAATTTATCAATATCGATTTTCAC 4285 29 89.7 31 ...AC.......................G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 4345 29 93.1 31 ....C.......G................ TAAATGCTCAACTACTTCTGTAGCTAATGGA 4405 29 89.7 31 ...GC........C............... CTCAACTCATTGATTTTTTCTTCTCTTGCCA 4465 29 89.7 31 ...GC.......................A TTTTTATTCCAAGGGCTTTTGCTTCTTGTGA 4525 29 89.7 31 ...GC......T................. TCAAATGATTTAATGAGCTTGTAGCCATTTT 4585 29 82.8 31 A..GC.......T...............A CGTCTTCTAATGATGGACTTTAATCCAATAT 4645 29 79.3 30 A..GA.......TC..............A TCTCACTGAAGATATGACCATCACTTTCTT 4704 29 79.3 31 CG..C.......CC......C........ TTATAACCACCAGTTAAAGTATTGACTAAAA G [4706] 4765 29 72.4 31 ...GC.G...A..C.AT...........A CAATCGGGGACGTGGTCAAAAAGATTATCAG 4825 29 93.1 31 ....A.......................G TGTTGATGTTGTTGTTCAGATCGTTTTTGGT 4885 29 79.3 31 ...GC....T..TC..............G ACATGCGAGCTTTCATTTAAATGTGTCATCA 4945 29 89.7 31 ....G........C..............A TTAAAGCATTTTCATATGAGCCTTCCTCATT 5005 29 86.2 31 ....A......TCC............... TCGGATCAGTCCAGTCATCATTCTCGTCAAT 5065 29 89.7 31 T..G........G................ ATTATTGCGCGACAGAACGTATCAATTAATG 5125 29 89.7 30 ...GC.......................C AAGCTGATGCTTCCTTATGGTTACAGTCAG 5184 29 86.2 0 .G..C...................AT... | G [5188] ========== ====== ====== ====== ============================= ================================ ================== 53 29 94.4 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACCCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTCGACCTCGCTGATCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTTCGAATGCAACTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGATATATGTAGTAAAATCAAATAAAATCATATATTTAATCTAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAGAAAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATTTTGGGATGGCGTCAATTGAACAAATATAATAATATACTGATTTATCTTAATTAATTTTTATAAAAAAATCCCAGTGTACATGACAGTGTACAAATTATATGTTGCTGGCCTATTTCCTTCGGGTTTGGTTGCTATATACGGAGTACAACTCATGTATTAAACACCTTACTGGCAATCCAGTAACACTACCCTACTCCACCACTTACACAGCATCACTTCGACATCTCGTCAACGCAATTTTGCGTTCGGCATTGTTTTCAAAAGTTTATCCAGAATTAGACGCACCTAAAACCCGATAAAACCCTATCAACTCTTATCATTAGCTCTTAATAAAACGTAGTCTTTTATCCAGGTAGCTACTACGAATTTCTCGTAGTAAGGCACTGTATTTGAAACATGGAAATGAGATTCCTTAAATTAGCGATAAACCTTGTTGTATATAGC # Questionable array : NO Score: 5.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.39, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-57] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //