Array 1 2326839-2325417 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP038153.1 Lacticaseibacillus paracasei strain TCS chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2326838 36 100.0 30 .................................... TGTTTTCTCCAGAACAACAGCTTAGACGGC 2326772 36 100.0 30 .................................... TGACATTGTGGGTATGCAACAAATCACCCC 2326706 36 100.0 30 .................................... GAAACTTGACAAAAACAATCTTATCTACTG 2326640 36 100.0 30 .................................... GAATATCATAATGCGGACGACCCATTACCA 2326574 36 100.0 30 .................................... AAAAGCCGGTGCAATATGCACCGGCTCACT 2326508 36 100.0 30 .................................... GCACTGATGAAACCGCACAACAGTTGACCG 2326442 36 100.0 30 .................................... GATCGCGGCACGATTGTAAACGAAGAAACC 2326376 36 100.0 30 .................................... CCAAATTGGTTAGCACCGCTTAAAGACGAA 2326310 36 100.0 30 .................................... TATCAGAGGCTTATCCATTAAACAACTGGC 2326244 36 100.0 30 .................................... AAACTGCCTTCCGTTGCGATCAACTCGCGC 2326178 36 100.0 30 .................................... AAGCGTTCGCTTGCGCTGGTGTTGGTCTCG 2326112 36 100.0 30 .................................... TCGTAGCGGCTAACACGCTTATGGCTGACA 2326046 36 100.0 30 .................................... AAAATATTTCTAGAATTAGCAACTTTATGG 2325980 36 100.0 30 .................................... GATCGTTGAAGAAAGGCTGATCAATATGTT 2325914 36 100.0 30 .................................... CGCAAAAAATGTTTTGACAAGAACACATCG 2325848 36 100.0 30 .................................... GGCCAATATCATCAGTCGGGAGATTGTCGC 2325782 36 100.0 30 .................................... ACTCGTCAATATCCTTCTGCATGATCAAGT 2325716 36 100.0 30 .................................... GCAATCGCGATACTTTCACCGATTGCAACA 2325650 36 100.0 30 .................................... AACAAAATAATAGGAGGTTTTTACCATGGA 2325584 36 100.0 30 .................................... ATGACTTTAACAATCAAATCCCAAGTTGTT 2325518 36 100.0 30 .................................... TATTATCCTAACACATCCATCGAGAAGTTA 2325452 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 100.0 30 GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Left flank : AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGTTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGTATTTACTTCAAGATCCATTTTTGAGCGACTTGCCAGTCACGGTTGAACCAGGCGGTAAGCTTGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGGCTGTCACGACAGAGTCAACCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAAAGAAACTTGTCATTCTTACAAATGTTAGTCATTATTTAAGTGCCAGAGACTTTTCGTCGGTGACTGAACAGATCGGTGATACTGAACTTCAAGTCGTTCTCATCGAATTCTCAAAGGTGAACAGAAAGAAGTACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGACAATCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACAG # Right flank : TGAATATTCTAATGTTGTTGGATTGAAGTCAATATTTGAGACAGATTTTAAGAGACATTCAGAACCGCGTTTACCTTCCACAGCTCAAATAAATCATCAATTGCGATTAATAACTTATTTGAACCCTGGAAAGCATTAAGTCAGGCGGCCATTTGGCTCGTAAGTGTTGCAATTTCAACTTGTAAGGGGGTCTGGTAGCCCAGTGAACTATGAATTCTCTTCCTATTGTAGAAAGCATGCACATATTCAAAAAGGACGGCAGCGGCAGTTTCATAATCTTCAAAGACCGGCACTGGATAAACACATTCCTTTTTGAGGGAAGCGTGAAAGGATTCCATTGGCGCATTATCATACGGACAACCCTTACGGCTGTATGAGTGGCGGATATGTAGTTCAGTTAAACGTTGATTGTAATCATCGCTGGTATACTGTGATCCTAAATCCGTATGGATAATCAGGTCCCCAGTAATGGTTCGATTTTTAACCGCGCTTTCAAGGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //