Array 1 1713532-1713165 **** Predicted by CRISPRDetect 2.4 *** >NC_017934.1 Mesotoga prima MesG1.Ag.4.2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1713531 30 83.3 40 C.CTT...T..................... TTGTAAACGACTGCGGAATGGTGACAGAACTTGCATGCGT 1713461 30 100.0 37 .............................. ACGGGCCTATCAATGTGGTACCGCACACATGGGTATC 1713394 30 100.0 35 .............................. GCTAAGTGGCAGCAATCCGTCTATCATTTCATCTT 1713329 30 100.0 37 .............................. ATGTAATTAGCATGATGTCAAGGTATGAGGGGGGGTT 1713262 30 100.0 38 .............................. ATTTCAAAGACGAATCGATAGAAATGGAGAACAACATG 1713194 30 83.3 0 .........T...............A.TTG | ========== ====== ====== ====== ============================== ======================================== ================== 6 30 94.4 38 GTTGCGTAAGAACCATAGTGGTATGGAAAC # Left flank : TCTCGCCTTCTCGTGAGTGCAGCGAACGTCTCTAAATGATCTTTCTCGATTGATCTTTTTGAAAGGGTTTTGCGGCCTCGGCGGGGGACGGAGGACTGTTGACGGACAACGTGGTTTCATTAGCTTCAGCGTGCAACGTTTTCTGGCCAAGCGGATCTTCTTTTTTGCCCGACGAAGTCGGAACTGGCCTTTACGAAGCAAAGACTGGCCACCGAAGGTGAATGAACCATAGTGGTATGAATTGCTGCCTTCGGCAGGACGCTGTGCCGGGAAGATCATCCCGGGAAGTGATGCGCCGAAGAACATCGGCGGATGCAATGCCCGGAGAACCATCCGGGGACGCATGGCTGGCTTCGCCAGGAGGAAAGATCCTTCAAGGGGCACCATGTTAGGCTGTGAGAACCAACTATTTTGTCATCCTGAAAAGCTCCTGTTCAGGATCTGGTCTTTGATCTTAACGAAGGACGGGTCCATGCTCTTGGACGGTCAACGGAGGACGG # Right flank : CTGCCTTCGGCAGGACGCTGTGCCGGGAAGATCATCCCGGGAAGTGATGCGCCGAAGAACATCGGCGGATGCAATGCCCGGAGAACCATCCGGGGACGCATGGCTGGCTTCGCCAGGAGGAAAGATCCTTCAAGGGGCACCATGTTAGGCTGTGAGAACCAACTATTTTGTCATCCTGAAAAGCTCCTGTTCAGGATCTGGTCTTTGATCTTAACGAAGGACGGGTTCATGTTCTTGGACGGTCAACAGAGGACGGCTCTTCCCAGCGTTCAGCGGGTCCTTGGTTTTAAGCGTAGAGCGTTTTCTAATGCGAGATCCCGTACAGAAGCACTACGGGATGACGCTCGGGGATATTACGGAATGATACAACATGTTTTCGGGGCGTGATACTCTCTTCTTAGGTCATCCTGAAAAGCTCCTGTTCAGGATTCGGGCTATTGAAACACCGGGGTTGAGGGTTGCAGTGTGCCAAGAAGGCGAAGAAGGAAACTTCAAGCCAT # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGTAAGAACCATAGTGGTATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [5-5] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 1717708-1714651 **** Predicted by CRISPRDetect 2.4 *** >NC_017934.1 Mesotoga prima MesG1.Ag.4.2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 1717707 30 100.0 35 .............................. AGTTGGGAAAATGGAGTTGTCCGGGTGGTAGGTGA 1717642 30 100.0 38 .............................. AGCTGTGACCTGATTCTACTACTCCTATACACTTCATA 1717574 30 100.0 38 .............................. TACCAACCTCCTTTTAGGTTTGTCAATCATTTGTTTTT 1717506 30 100.0 38 .............................. AACCAATACTTTCTGTTTTCCACTTTCCGCTATATTCC 1717438 30 100.0 37 .............................. TTGAGAATACCTATCACCGTGTTGGCCGTGTCTGCAT 1717371 30 100.0 36 .............................. GATCGAGAGAGCGTCGAGAATCCCGTCTTTGACCTT 1717305 30 100.0 37 .............................. GAATCGAGAAGGCCACTACCGGGGACGCGTACTCTTC 1717238 30 100.0 37 .............................. GTTCTTGAAGTTGGGTACGGATGAGCTCTCGAAGTGA 1717171 30 100.0 37 .............................. TTTGAGCATATGAACCCTTGTTCTCTGTGAACATTGG 1717104 30 100.0 37 .............................. AACAGTCCTTCGAGTTTGAGGCCGTACTCCCGGGCGA 1717037 30 100.0 35 .............................. TTTCACGCCGACGATGTGACCATTCTCGTCTCTCA 1716972 30 100.0 38 .............................. TTGCTCCACATTCTTGGCAAGTGTGTTCTTTTCTTGCC 1716904 30 100.0 36 .............................. GGGGAGTGTCATTTCTTCGTCTGAACCATTGATTAG 1716838 30 100.0 38 .............................. CCGAGACCTCGCCACGAATCGTATTGCTTCTCGATCAT 1716770 30 100.0 37 .............................. GACTCATTCCCTTCCCGATCTCTTTCGCGATAGTCTG 1716703 30 100.0 38 .............................. CCGTTTGATCTTACATTATCCATTAGCCATTCATAGAC 1716635 30 100.0 36 .............................. TCACGCACCCCCTATTGTTACGAAATTCTAAACCGC 1716569 30 100.0 36 .............................. AATTCAATCCACTAAGATATATCCGACAAATAAAGT 1716503 30 100.0 38 .............................. AAACTTAAGGAATTCCTTTCTCCCATCATTGGACGACC 1716435 30 100.0 38 .............................. ACAGAATACAGCTGATAGCTTTCGAAAAGTATCGCTGT 1716367 30 100.0 39 .............................. GCGGGTTCATAGCGAGCGTTTATACTCTCCCCGCAGTTA 1716298 30 100.0 36 .............................. ATTAACTTGGCCCTTACTACCTTAGCAGAGCAATTG 1716232 30 100.0 39 .............................. TGTAAAAGCAGGGCAAAGTAGTGCCTTTGAGTGTACTTT 1716163 30 100.0 38 .............................. TTTCTATTCTTAGCCACGATTATCTCGAAGTCCTTCTC 1716095 30 100.0 37 .............................. TTCGTTTCGCCAATTCCAGCCGTGAGACTTCCTTTTT 1716028 30 96.7 37 .......G...................... GTTTTACGTGTTGGCGCACAAATTTTTGTGATGCATG 1715961 30 100.0 36 .............................. ATTTTCCATTCATCGTTTTTTATACTTATGATTTAT 1715895 30 100.0 38 .............................. GTGTATCAATGGCTTCTGCGATGGCCAACAGGTATGTA 1715827 30 100.0 39 .............................. ATCCCGCGGCGTATGATACCGCAAACGCCAACATGAATG 1715758 30 100.0 37 .............................. GTTTTACGTGTTGGCGCACAAATTTTTGTGATGCATG 1715691 30 100.0 36 .............................. ATTTTCCATTCATCGTTTTTTATACTTATGATTTAT 1715625 30 100.0 39 .............................. ATCCCGCGGCGTATGATACCGCAAACGCCAACATGAATG 1715556 30 100.0 37 .............................. GTTTTACGTGTTGGCGCACAAATTTTTGTGATGCATG 1715489 30 100.0 40 .............................. GCGTGCATACTGTACATATACGCTAGAGCCAACCTTCCTT 1715419 30 100.0 35 .............................. TTCTTTTTCCCAATTGAATTTCAGGGAAGCAGGGC 1715354 30 100.0 35 .............................. ACTTTAAGACTTCACGGCATCGAAAAATTCATTAC 1715289 30 100.0 41 .............................. ATTTCTGTAACCTTTCCATCAGAAGTCGATACTTAGGATAC 1715218 30 100.0 38 .............................. TGTATATGCATATATATGAATAAGAAAGCGCCCTGCAG 1715150 30 100.0 35 .............................. TGCTTGATCTGTTGTGACTTTACAATTACGTTCCA 1715085 30 100.0 39 .............................. AAACTGGCTCTGTTTTTCCACTTATCGAAACGAAAACTC 1715016 30 100.0 38 .............................. TTGCAATGCTCTTGCTATAATGGCACTAAACAAGTTTT 1714948 30 100.0 38 .............................. TGCAATTTTTTAATAGTCATAGTTGTCTCTTCCATCTG 1714880 30 100.0 37 .............................. TTCTTCAGGCCCAAATAATTCAGATGGAGCAACGCCA 1714813 30 100.0 38 .............................. CCACAATTTAAGATTTGCCGTCTCGATCAGTAAATCCT 1714745 30 96.7 36 .......G...................... ACAAGGCCATAAGTTGCGCCTTGAACTCTTCAACGG 1714679 29 86.7 0 .......G.................-..TT | ========== ====== ====== ====== ============================== ========================================= ================== 46 30 99.6 37 GTTGCGTAAGAACCATAGTGGTATGGAAAC # Left flank : CTTATTGTCGGATCGCATTACGTAAAGTCGATTTCGATGAACCCCAAATTAAGGAGTGTATTTATCCGATTTTGTTGATCGCATTGAGTTGTCCTTGCATAGAGCTTTTTCCGAGTTAATAATTCCGTTACCAATCCTCGTCGGATCGATCGTATACCATCTTCCTATGAAATCATTTCCTAATAACACTTCTAGGCCTATTTAGAATGATTATTATGCAGTTTACACAGATTCGACTGAGGATAGGTCATTTGATTGAAAGCGAAATCGGGAGCGCTTTTCTTCTGTAAGCTTCTGCTGGGGAGTGTCGCGTTGGTATTCTTCACGGTCGTTCTTCCTTAGAGAATACCGGCGCCTTCTCCCTCCACATCACACTGCGTCCATCAAGAATCAAATCCAAGCGAATCGCCGAAATGTAAATTCGATGTCGCTTACGAGATCTTCCCAGTTGGTTGATTCTGCCTCCCCAAAACCTGTATAATATCTTTGTAATAAAAGCG # Right flank : GCTGCCTTCGGCAGGACGCTGTGCCGGGAAGATCATCCCGGGAAGTGATGCGCCGAGGATCATCGGCGGACGCAATGCCCGGAGAACCATCCGGGGACGCAAGGCTGGCTTCGCCAGGAGGGAGAACCCTTCAAGGGGCATCATGTTAGGCTGTGAGAACCAACTATTTTGTCATCCTGAAAAGCTCCTGTTCAGGATCTGGGCTTTTGGAGACCGTGGTTGGGGTTAGCAGGCAGCGGGTTCGTAAGAGCAAGAGAAACAGGTTTACCTCTGGCGGCTCCGTTCGTCGAGGAGCGCCGTGAAGCAATAACATCAAGATTCCGACCAGGAGCTTTGTCGGAATGACGACATTTGACGCCTTTTCCTCAGGACTTCAGCTTGCAACTTGGAACATTCAACTCGTAACTGCTCTTTCGAAGGACGGGTCCGTGATCTCGGGACGGTCAACGGAAGACTTTTCTCAAAGACGTTCAGAGTTCAGCGGATCCTTGACTTTAAGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGTAAGAACCATAGTGGTATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 3 1738013-1738379 **** Predicted by CRISPRDetect 2.4 *** >NC_017934.1 Mesotoga prima MesG1.Ag.4.2, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1738013 29 90.0 37 AA..-......................... ATCTTCTGGTTCGATATTCCTAGTATTACTTCTGCTG 1738079 30 100.0 38 .............................. GTTTGGAGAGCAAACATTCATAAGGTTGAGAATCTCCT 1738147 30 100.0 38 .............................. TCACTACAAGAAATGGTTAAAGTATTGTGATCTACCAA 1738215 30 100.0 38 .............................. TCCAGAGCTGCAAACGAAAATGTAAGCAGAATAATCTC 1738283 30 96.7 36 ......................C....... CCGCACGGCGATGACTCAAGAGGTTGTCGGGGATAT 1738349 29 90.0 0 ........................A.-.G. | A,A [1738370,1738372] ========== ====== ====== ====== ============================== ====================================== ================== 6 30 96.1 38 GTTTCCATACCACTATGGTTCTTACGCAAC # Left flank : AAGGATCAAAGACCAGATCCTGAACAGGAGCATTTCAGGATGACAAAATAGTTGGTTCTCACAGCCTAACATAATGCCCCTTGAAGGATCTTTCCTCCTGGCGAAGCCAGCCATGCGTCCCCGGATGCTTTTCCGGGCATTGCGTCCGCCGATGATCCTCGGCGCATCACTTCCCGGGATGATCTTCCCGGCACAGCGTCCTACTAATGCAGCAATTCATACCACTATGGTTCATACAAGAGCCGTCCTCCGTTGACCGTCCAAGAGCATGGACCCGTCCACCGAAAGGATCAAAGATCAGATCCTGAACAGGAGCTTTTCAGGATGACGAATTGAGTTGGTTCTTACAATCTAACGTCTTGGCTCTTGAGAGGTTCTCCCTCCTGGCGAAGCCAGCCATGCGTCCCCGGATGCTTCTCCGGGCATTGCGTCCGCCGATGATCCTCGGCGCATCACTTCCCGGGATGATCTTCCCGGCACAGCGTCCTGCCGAAGGCAGC # Right flank : CCGTCCTCCGTTGACCGTCCCAGATCATGGACCCGTCCTCCGTTAAGATCAAAGACCAGATCCTGACTAGAAGCGCGTCAGGATGACAAGGTGAGTTGGTTTTCACAACCTAATGTCCTGCTCCTAGAAGGGTTCTCCCTCCTGGCGAAGCCAGCCTTGCGTCCCCGGATGATTCTCCGGGCATTGCGTCCGCCGATGCTCTTCGGCGCATCACTTCCCGGGATGATCTTCCCGGCACAGCGTCCTGCCGAAGGCAGCAATTCATACCACTATGGTTCTTACGCAACGCCGGGCAGTTCTCTCATAGAAGGATTGCGGCTCAATGTTTCCATACCACTATGGTTCTTACGCAACCTACAGCGGGAAGTCGCTTCTATTGCAGCACAAGACACGTTTCCATACCACTATGGTTCTTACGCAACTATCCCATCTTTCAGGCGAAGCATACCTATTTTCAGTTTCCATACCACTATGGTTCTCACGCAACTTCTTTTTGCTTA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATACCACTATGGTTCTTACGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 4 1739133-1738637 **** Predicted by CRISPRDetect 2.4 *** >NC_017934.1 Mesotoga prima MesG1.Ag.4.2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1739132 30 83.3 39 C..TT..AT..................... AGATCATCACCATCCAGAACATCCTCCGGATCAATCTCA 1739063 30 100.0 34 .............................. TTGACGATACCGCAGGAAGCGACCAATCTACACC 1738999 30 100.0 38 .............................. TGTTAAGCATGGAAGAAAAAACGGTGCGGAACGCTTAG 1738931 30 100.0 36 .............................. AAGTAACGAATCCATACACATAATAAGCAAAAAGAA 1738865 30 100.0 35 .............................. TGAAAATAGGTATGCTTCGCCTGAAAGATGGGATA 1738800 30 96.7 38 .......A...................... GTGTCTTGTGCTGCAATAGAAGCGACTTCCCGCTGTAG 1738732 30 96.7 37 .......A...................... ATTGAGCCGCAATCCTTCTATGAGAGAACTGCCCGGC 1738665 29 86.7 0 .......A.................-..TT | ========== ====== ====== ====== ============================== ======================================= ================== 8 30 95.4 37 GTTGCGTGAGAACCATAGTGGTATGGAAAC # Left flank : GCATCCGGGGACGCACGGCTGGCTTCGCCAGGAGGAAAGATCCTTCAAGGGGCATCATGCTAGGCTGTGAGAACCAACTATTATGTCATCCTGAAATGCTCCTGTTCAGGATCTGATCTTAGATCCTTTCGGAGGACGGTTCTCAGGCCCGACGAAGTCGGAACTGGCCTTTGCGAAGCAAAGACTGGCCGCACGAAGTGCGACTGGCCACCGAAGGTGAATGAACCATAGTGGTATGAATTGCTGCCTTCGGCAGGACGCTGTGCCGGGAAGATCATCCCGGGAAGTGATGCGCCGAAGATCATCGGCGGACGCAATGCCCGGAAAAGCATCCGGGGACGCATGGCTGGCTTCGCCAGGAGGAAAGATCCTTCAAGGGGCATTATGTTAGGCTGTGAGAAACAACTCAGTTTGTCATCCTGAAAAGCTCCTGTTCAGGATCTGATCTTTGATCCTTTCGGTGGACGGGTCCATGATCTGGGACGGTCAACGGAGGACTG # Right flank : GCTGCCTTCGGCAGGACGCTGTGCCGGGAAGATCATCCCGGGAAGTGATGCGCCGAAGAGCATCGGCGGACGCAATGCCCGGAGAATCATCCGGGGACGCAAGGCTGGCTTCGCCAGGAGGGAGAACCCTTCTAGGAGCAGGACATTAGGTTGTGAAAACCAACTCACCTTGTCATCCTGACGCGCTTCTAGTCAGGATCTGGTCTTTGATCTTAACGGAGGACGGGTCCATGATCTGGGACGGTCAACGGAGGACGGCTCTTATATGAACCATAGTGGTATGGAAACATATCCCCGACAACCTCTTGAGTCATCGCCGTGCGGGTTGCGTGAGAACCATAGTGGTATGGAAACGAGATTATTCTGCTTACATTTTCGTTTGCAGCTCTGGAGTTGCGTAAGAACCATAGTGGTATGGAAACTTGGTAGATCACAATACTTTAACCATTTCTTGTAGTGAGTTGCGTAAGAACCATAGTGGTATGGAAACAGGAGATTCT # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGTGAGAACCATAGTGGTATGGAAAC # Alternate repeat : GTTGCGTAAGAACCATAGTGGTATGGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 5 1744361-1739719 **** Predicted by CRISPRDetect 2.4 *** >NC_017934.1 Mesotoga prima MesG1.Ag.4.2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1744360 30 100.0 35 .............................. AGTTGGGAAAATGGAGTTGTCCGGGTGGTAGGTGA 1744295 30 100.0 34 .............................. AAGAATCAATGTTATAGATAAAAACCCCGTTCCT 1744231 30 100.0 36 .............................. CTAAATCAATTCGCACCGTATCATATCTATAACTCA 1744165 30 100.0 36 .............................. AGTTGGGAAAATGGAGTTGTCCGGGTGGTAGGTGAT 1744099 30 100.0 38 .............................. GAGGCAAGTTTCCAAACCCTCTATAACTTCCTTGCTTG 1744031 30 100.0 38 .............................. TTCAAGCAGCGAATCCAGAAACCGTTTTCGTTGTATCC 1743963 30 100.0 38 .............................. ACTCACGTGGCTAATAAAGTAGTTCGAGGTATTAACTG 1743895 30 100.0 37 .............................. GATTTTGTTGAGGAAAGGAAATTCCTGCCTCAACATT 1743828 30 100.0 38 .............................. TCGTGTAGAACATAGTAAACAAGCCACCTTACAGATTC 1743760 30 100.0 37 .............................. ATCCTCAATTAGCACAAACAACCTTCGGGGATTTCCG 1743693 30 100.0 37 .............................. AATACAGCCTCAAGATCAGTACCTTCATGATCTGCAG 1743626 30 100.0 35 .............................. TTTGGCAGACCGTTCTTAGCAGAGACTATTCTCTC 1743561 30 100.0 37 .............................. GTTAACGGGTGTTGCGTGATGGTCTCCTTGGCATGGT 1743494 30 100.0 37 .............................. AGTATAGTGAGCATTACAATATCTTTCTGCAAACTTC 1743427 30 100.0 39 .............................. AAATTTCTTCGGGGACAGGGACAATCCTGTCATCTCTCG 1743358 30 100.0 36 .............................. ATACTTTTTAGATAAAGATCCGCGGGCTTGTCTTAA 1743292 30 100.0 37 .............................. TCATTTCTTCGTATACACGAAGCTAGCAGTATCATTA 1743225 30 100.0 39 .............................. TCCTTACGCATACCAGGAACAATACCCCGAACATAACCT 1743156 30 100.0 35 .............................. ATATCCTGACTCATCAAACCAATACTTTCTGTTTT 1743091 30 100.0 36 .............................. GTGATTGGATACTTTGCTAAGTATTGCGGAAAAGAA 1743025 30 100.0 37 .............................. CTGAAAGTACGGGGGGCGGAATCGGATACCTGGTTAA 1742958 30 100.0 38 .............................. GGAATCGGAGGGGTAGCAATGCCAACGATTGAAAGAGT 1742890 30 100.0 37 .............................. TTAGGGAATTGGATATATTTATGAGAAGTAATGGTGC 1742823 30 100.0 36 .............................. AAAATATGGGGGCTTCTCTGGGTGCGTGTATCTGGG 1742757 30 100.0 36 .............................. AGGAAAATACGGAATCAGTCTTGTTAAGCATGAAAG 1742691 30 100.0 35 .............................. ATAAAGAAGTGTATGAGAAGCTATACGAGATCGCT 1742626 30 100.0 35 .............................. CTATAACCCCCATCCTTTACCATCGCAACCCTCCT 1742561 30 100.0 38 .............................. ACTCATGTTCGGTCAAGATCGCCCCGAACATTCGCAGG 1742493 30 100.0 38 .............................. TTCCTGGATCCCTTCCCTCGGACTGGTACAGAACAGCC 1742425 30 100.0 40 .............................. GATAATCCTTTCCCATATATCGCATCATGTAACCAATCGC 1742355 30 100.0 34 .............................. ATTGTAACAGACAAAGTCTCCTTGAATGACCTTA 1742291 30 100.0 37 .............................. CCTTGAGAGTGGCTGCTCTCGTGGCGGAGGTGATAGA 1742224 30 100.0 38 .............................. TGCTGAGATGAGTAAGTTTAATGAGCTTGCGGAGAAGT 1742156 30 100.0 37 .............................. GATGATATTCCTAGCGTCTTCTGAAGGTAGTTCCAGG 1742089 30 100.0 37 .............................. TCTTCTGATGATCTTCAACGAGGTATAAACGCCAATT 1742022 30 100.0 37 .............................. GTATAAAGATTCAATAGAGAGGCATTGTCGCAAGCCT 1741955 30 100.0 36 .............................. GTGAAAGGACCAGTGTAATCCGCAGCGTACTTGTGC 1741889 30 100.0 37 .............................. CTTATACATGTCTTCTATCATCTCTTCCGGCAGGTTC 1741822 30 100.0 36 .............................. GTATTGGGTCTTTACTGATGAGTTTGTATCCGTGCC 1741756 30 100.0 35 .............................. CGAAAGTGAGGACTGAGATCGATGGATGACCTTTT 1741691 30 100.0 37 .............................. TATGCTAGTATCAGCAAGAGAACCAACTGCACCAGGA 1741624 30 100.0 35 .............................. TACAATCGCCCCTCTATCTCATCGATAAATTCCCG 1741559 30 100.0 36 .............................. TACATATGCTTCTTATAAGCCTTTTTGTAAAACTGA 1741493 30 100.0 39 .............................. AACCAAAACAGTTTTTTCCATATGCTAGTATCAGCAAGA 1741424 30 100.0 38 .............................. ATGAAATAAGCCCATATAAACAACGTCGATATAGGCTT 1741356 30 100.0 38 .............................. TTTTAATATAATTAAACACATAATAAAAGGCACAGATA 1741288 30 100.0 38 .............................. GTATTGCATTTTTATTATAGGGTTGGTATGATTATACC 1741220 30 100.0 36 .............................. GAGTTTCGCTCTGAATTTGAGAAATTTGCTTCCTCA 1741154 30 100.0 38 .............................. ATGCCCGGGAGTTATCCGTTGACTACGAAGCCCTCCTG 1741086 30 100.0 38 .............................. TACTGCATCTTCAGCCTGTACGCCCTCCTAAACTGCAG 1741018 30 100.0 38 .............................. ACTGAGCGCGCATCTTGGAGCTAAAATCACCCATACAT 1740950 30 100.0 37 .............................. ATCCACAGAGCGGTTTTATAACCGACTATTATGACAT 1740883 30 100.0 37 .............................. AGGCAGAAGTCATAAAACCTCCTTGCTTCTTCCATGT 1740816 30 100.0 38 .............................. CACTTAGCCGATTGGCATAGTGAACCATTTTCAGTATG 1740748 30 100.0 38 .............................. GCAAGTTGAGTACCCATGCCTAGCATCGCTGCCACCAG 1740680 30 100.0 38 .............................. GTGTGGGGGCAATAGCGTTCACTGTAGTTGGCGATTGA 1740612 30 100.0 36 .............................. CTTTATATCCGTGGCGTTTCCTTGCCTTGTTATCCT 1740546 30 100.0 38 .............................. TGTGAATACTTTTGTGTTCGTTTCGATCCTCTTCCTGA 1740478 30 100.0 35 .............................. GTGGACAGTACCGCGAACTGCACCGTCACGGTCGG 1740413 30 100.0 36 .............................. ATATGCTTACCGAGGCTTCATTCATGCCCGGTGCAG 1740347 30 100.0 37 .............................. TTGGAAAACGCACTGAGTGTCAAACTCTCGATTCTGC 1740280 30 100.0 38 .............................. ATGTTACTGTGGTAGCTTCCATCGTAAGAATACCGAAG 1740212 30 100.0 35 .............................. CACCTCCTATGCCTTTCCTTCCCAAGTTCGTGTGC 1740147 30 100.0 37 .............................. TGTCCAGGACGTATAGGGGGTTACCTTACGGATTCCG 1740080 30 96.7 37 ..................C........... AAGCGAGGAACTCAAACAGCTGTGCTTTCGTCACCTG 1740013 30 100.0 35 .............................. GTTATACACAAACTTCTCAAGCTTTCCTTTGTCAT 1739948 30 100.0 36 .............................. GCAATACTGACGTCTTCTATAGAATACAGCTGATAG 1739882 30 100.0 37 .............................. ATATTTGCCGACAGAGTTTACCCTGCGGCCAGGGACA 1739815 30 96.7 38 .......G...................... ATTAGCTTATTCATATTTTTCCTCCTTTTTTATATAAC 1739747 29 86.7 0 .......G.................-..TT | ========== ====== ====== ====== ============================== ======================================== ================== 70 30 99.7 37 GTTGCGTAAGAACCATAGTGGTATGGAAAC # Left flank : CTTATTGTCGCACTAGATTACATGCGATCATTTCATGTAAACGCCATATTGCGGATTATCATCATCGGCTTTTCCGAACAGAGTTGTATTATCCTTCCCATAAGCCTTTCCCGAGTTAATAATTTCGTTACCAATTCTCGTCGGATCGATCGTATGCCATTTTCTTCTAGACTCATTTCCTAATAACACTTCTAGACCTATTTATAATCATTCCTGTACAGTTTACACAGACACGACTGCAGATAGGTCATTTGATTGAAAGCGAAATCGTGAGCAGCTTTCTTCTGTAAGCTTCTGCTGGAGAGTTTTTCGCCGGTATTTTCTGCAATTGGTCTTCCTTAGAAGATACCGGTGCCTTCTCCCTCCACATAACACTGCGTCCATCTAGAATCAAATCCAAGCGAATCGCCGAAATGTAAATTCGATGGCGCTTGCGAGATCTTCCCGATTGGTTGATTCTGCCTCCCCAAAACCTGTATAATATCTTTGTAATAAAAGCG # Right flank : GCTGCCTTCGGCAGGACGCTGTGCCGGGAAGATCATCCCGGGAAGTGATGCGCCGAAGATCATCGGCGGACGCAATGCCCGGAGATGCATCCGGGGACGCACGGCTGGCTTCGCCAGGAGGAAAGATCCTTCAAGGGGCATCATGCTAGGCTGTGAGAACCAACTATTATGTCATCCTGAAATGCTCCTGTTCAGGATCTGATCTTAGATCCTTTCGGAGGACGGTTCTCAGGCCCGACGAAGTCGGAACTGGCCTTTGCGAAGCAAAGACTGGCCGCACGAAGTGCGACTGGCCACCGAAGGTGAATGAACCATAGTGGTATGAATTGCTGCCTTCGGCAGGACGCTGTGCCGGGAAGATCATCCCGGGAAGTGATGCGCCGAAGATCATCGGCGGACGCAATGCCCGGAAAAGCATCCGGGGACGCATGGCTGGCTTCGCCAGGAGGAAAGATCCTTCAAGGGGCATTATGTTAGGCTGTGAGAAACAACTCAGTTTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGTAAGAACCATAGTGGTATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 6 2476499-2471273 **** Predicted by CRISPRDetect 2.4 *** >NC_017934.1 Mesotoga prima MesG1.Ag.4.2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 2476498 30 100.0 36 .............................. TCGACTTCGAGATTGGCGAAGACGAGCTTGAGACCG 2476432 30 100.0 35 .............................. CCGCTCATGTTCGTCGAACCACCTGCAGTCGGTAT 2476367 30 100.0 35 .............................. TAGACCACTCGTCAAAGACTGTGAGGTTCATTCCC 2476302 30 100.0 35 .............................. TTGCTAGAGAATGGTAATATCCAGAAGATACAGCT 2476237 30 100.0 37 .............................. CACTTTGGCGAGTGAGGGCGCACAGAAAATTACGCTA 2476170 30 100.0 39 .............................. GCGGATAACCGAGCAGGAATAGGATAAACACTATATCAA 2476101 30 100.0 35 .............................. CGGTATATCGTCTCAGAAAAGGCTATGAAGTGCAT 2476036 30 100.0 36 .............................. CACCGTCAATGCCTTCAAAGCGCAAAGCTGCTAATC 2475970 30 100.0 35 .............................. GAGAAAATAGAGCCGTTGCTTGAATTGCTAACGGT 2475905 30 100.0 37 .............................. CAATATGGGAATATACTATATAGAGCACTTGTACTTG 2475838 30 100.0 35 .............................. GTGAACGTTGAATAGACTCAAAACGTGGGAATGGA 2475773 30 100.0 35 .............................. GATAATCAGGATTGAAGCCTATTTCTAACTCTTTG 2475708 30 100.0 34 .............................. TTCCTAAAGAATGGTAATATCCACCAGATACGGC 2475644 30 100.0 36 .............................. CGGCACTACCGCTTTTTCTGCCACCACCGAAGCCGT 2475578 30 100.0 35 .............................. TGTTCGACCAGGTCTCGTCAAATTCGACCTCTATC 2475513 30 100.0 35 .............................. TCTTTCGTTCTATGAGGCTGTGGTTTGAATACCTT 2475448 30 100.0 35 .............................. TGCCAGATCCTCTGCTTCATATTTCCAGAAGAACC 2475383 30 100.0 36 .............................. TACCTAACCTAGGCAGGGGATGAAACTGAGTCGTCC 2475317 30 100.0 36 .............................. TGTGTTGACTTTCCTTACATTAGATGGTGGCACTAC 2475251 30 100.0 35 .............................. TCTGATAAAGAGTGTGCCTGTTTTCGTCAAGAGGA 2475186 30 100.0 36 .............................. TACGTCCCCAGTTCTTGAAGTTGGGCACGGATGAAC 2475120 30 100.0 37 .............................. CCAAAGTTTCAATGCCAGAGGCAGCGCCTTTCTGACC 2475053 30 100.0 35 .............................. TCAAGAATCAAGAGATCTGCCTGCTCGATCATCTG 2474988 30 100.0 35 .............................. TCGAGCCTGTCGAGCCGTTTCTCTGCTTCGCAATG 2474923 30 100.0 38 .............................. TCTGCACTTGCAACCAATTCGGGTTTTGGGTCATTTTG 2474855 30 100.0 34 .............................. TAGAAGAAGTCGAGTGAACCACAAACTTGAACTG 2474791 30 100.0 35 .............................. CTTTTCACGTTGTGGATATTGCTTCTCGTTCTCGC 2474726 30 100.0 37 .............................. CTTCAAGATCGGCAAATATGCCATCGACCCACATTCG 2474659 30 100.0 35 .............................. CACTTTCTCGCAATTACAGAGTCAGCTCAGGGACC 2474594 30 100.0 39 .............................. TTGAGCTTGTACTGTTTCTTTCCTTCCTCCACGATTCCG 2474525 30 100.0 34 .............................. CATCGCAATACTTTTCGTCAAGTTCCATCATGTA 2474461 30 100.0 36 .............................. AAAGAGAAAGTCACACAGAATATGAACGGTGGCTCG 2474395 30 100.0 35 .............................. ACCTTCCACGGCCTGACAACATCAATATCTTTCGT 2474330 30 100.0 37 .............................. ATGGTTTTGGGCACGGGTGATTGCCAACACCTTTTTG 2474263 30 100.0 34 .............................. GCCTGTCTTCAAGGAAGCGGAGCTGAGAGATCCC 2474199 30 100.0 38 .............................. TGTCTCTGTATCTCTTCACTTTAGGCCAGTGCTTTTCA 2474131 30 100.0 43 .............................. TATCTTCTCATCCTTCACCACCTCTTCCTTAGGAGGCTCAGCG 2474058 30 100.0 34 .............................. GTCTCATCGGGGATCTCGTCAACAGTCTATTGAA 2473994 30 100.0 35 .............................. CCGAGAGGACTATTCAGAGATGGAAGCCCGAAGCC 2473929 30 100.0 36 .............................. TCTTGTGCGATGAAAAGGGTTTCAACATCTTTTCGC 2473863 30 100.0 34 .............................. TGTCTTTTACCACTATCACGTACTTAACCATTTA 2473799 30 100.0 35 .............................. CTCCAAATAAAGAAAGGCTCTCCGAAGAGAGCCTT 2473734 30 100.0 34 .............................. TGATGTAGTCAACATCTTTGAATCGAAGATAATC 2473670 30 100.0 35 .............................. CCGTATGAACCTAACAGGTTGACGAGGGTAGTACC 2473605 30 100.0 35 .............................. AAGGAATCTCTATGTTTGTTGAGTCTGTGGTAAAG 2473540 30 100.0 36 .............................. TTTTCTTTCTCATAGGCCCACTCCACCAGCCTTTTC 2473474 30 100.0 38 .............................. CTCCGCCAACAACCTCTAACCCGCTTCTAAAATCACCA 2473406 30 100.0 37 .............................. TCAGAATTGAGGGTTCATATTGAGCCTCGCCCTCGGC 2473339 30 100.0 35 .............................. CTATTGGTTCTGTGGAATCATATCAATACAATGCT 2473274 30 100.0 35 .............................. TCCGACACGAGTATCAGCATTATATGCAAACCGCA 2473209 30 100.0 38 .............................. TGACGGTGCTTCGAAGAGAATCTATTACAGAATCGACT 2473141 30 100.0 35 .............................. TGTAGATGCTTTTGCAGATGTAGAGTTTGAGGCCG 2473076 30 100.0 36 .............................. TCTCTCACCTCAACGAAAAGATTGGGGGGTTTCAGT 2473010 30 100.0 36 .............................. GTAAGCGAGAATACCTCATATGGGCCAGATGATGGT 2472944 30 100.0 34 .............................. TTGGAGCGCTTCTAATGTTCATAGGCATTACCAG 2472880 30 100.0 39 .............................. TCCCTTCACAGGCGAGTTTTCTCTCGAACTGCCCTTCAG 2472811 30 100.0 34 .............................. TCAGAAAGAGACGAAGCTCGATGTGACACCTTCG 2472747 30 100.0 34 .............................. GATGGAGGCATGTTTCTTCAAGCAAGTGGGGAGG 2472683 30 100.0 36 .............................. CTGATATGGCGTTAGGGGATATGCACATAGGACCGA 2472617 30 100.0 35 .............................. TGTGAATCTCCATGCGGTGAGAATCCGGATTTCTC 2472552 30 100.0 34 .............................. TTTGCTTCGTCTGCCAGTCAAAAACCTTAAACAC 2472488 30 100.0 38 .............................. GCGTAAGCATCTATCTCGAACCAGTTCTCCGAATAATC 2472420 30 100.0 36 .............................. GCTTCACCTCTGGTTCTTCAGAAACTTCGGAGGTTT 2472354 30 100.0 35 .............................. GCGTCCGAAAATTCGTGGGTTGAATTTCGTTTTTT 2472289 30 100.0 35 .............................. ACCTCTCGCCTTAGGCCTTTAGAGTAAACACACAT 2472224 30 100.0 36 .............................. TGCCTCCAAAGCTAACCGCCCTTATGGGCGGCTAGA 2472158 30 100.0 37 .............................. TCAGAAAGAGACGAAGCTAGAAGTGACGCCGTCTAAA 2472091 30 100.0 36 .............................. TGTTATAGACGTTGACGGTGCTAAGGTTCTACTTAC 2472025 30 100.0 35 .............................. TCAAGGGCGCAAACGGAGAGGCCAATAAAGTTTAT 2471960 30 100.0 36 .............................. CACGGCGTTACATCGGGGGTGTTTGCGTTACGTGTA 2471894 30 100.0 38 .............................. TCTTTCTATTGTGCTAATGAAATATCTTGTGTTTGCGG 2471826 30 100.0 36 .............................. CGGATATCGCCATAAGGGCGTCTTGCGTGAGGGCCG 2471760 30 100.0 38 .............................. TGAGCTTTTGCAATCCTCTTTGCTTCGGGCACGGTAAG 2471692 30 100.0 34 .............................. TCAGCACTGATACCTCCGATTGTCATGGCAGCAA 2471628 30 100.0 38 .............................. TGAGCTTTTGCAATCCTCTTTGCTTCGGGCACGGTAAG 2471560 30 100.0 34 .............................. TACCGTCTAAGAATATTCTCAAGGTATAGTTGCT 2471496 30 100.0 34 .............................. TACCGTCTAAGAATATTCTCAAGGTATAGTTGCT 2471432 30 100.0 36 .............................. CAAAGAATCCATCTTCTCCCTTCCACCAGAGAACAT 2471366 30 100.0 34 .............................. TACCGTCTAAGAATATTCTCAAGGTATAGTTGCT 2471302 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =========================================== ================== 80 30 100.0 36 GCTTCCAGACTACCTATGAGGAATTGAAAC # Left flank : GAGTGGAAACTGATGAATCGAAAGGCTGCGTTCAGGTTGCTCAGATTGATCTAGATGGATATGATATTGAACTAAACGAGGAATTTCCAGTAATAAAACTCTCAAGATCTCATTCGGCAATCTCCCACGTGCTCGCCGACAATCAAATAGATAGCTCTGCCTTAAGTGGCAACATAGAACCTCTTATTGGACTTGAAACAACTAGAGAAGAGAGATTCGGAGCAGAAATCTCAGCAGCTCAAATATGCTGGACACCTGGTACTAAATTCAGTAAAGATCATACTTTTTTGATAGGCGAAAAAGGAATCTGGAAATCCAAATCCTGATTTACTTCTCCGTCGACCCCTGATAAATTGAAAACACCTGGGGATCGACAGAAGCATGTCAATTCAGCTCTTCAGTTTTGTGTGCAATTCATGAGAAAATGGTCTTTGAAAAACAGGCAAGAACTCATATTGCCTCAAAATGCTGAAAATCCTTTATAATCTATATAGTAATGG # Right flank : TCTCAAACGGGGTTGTGGGGATAGCGGGTCGGTGGTTGGAGTGTGCCAAGATCAGTTGCAAGTTCCAGTGTGAGTTGTGAGTAGAAAAGTCCAACGAAATGGGTCTCAGGTCTCGGAAGATCAAACAAACCGGTTCTCCGTTCACCGAGGAGAGCCGTGAAGCAATAGTATCGAGATTCCGACCAGGAGCTTTGTCGGAAGAACGGAATCTAGCCTTTTCGGAATAACCGTTAATTGTCATCCCGGACTTGATCCGGGATCTGTTCCAAGAACGAACAACCTGGACGCGCAGCGTCGGAACGAAGAACCAGTCTTCCCGAAGGACGGATTCATGGTTTTGGACGAAGGACGGCACTTCCCGGCGATCAGCGGGTCTAATTGAACTCGTCAGTCCCCATTTTGCTTTCCGACAAAGTCCGGACTCGCCACCGAAGGTTACTGGCTTCTCGATTTCTATTCCTCTCATCAGAAGATTGGTAAACTCTCGAAAAGGTTTCTTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCCAGACTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 7 2491950-2484839 **** Predicted by CRISPRDetect 2.4 *** >NC_017934.1 Mesotoga prima MesG1.Ag.4.2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 2491949 30 100.0 38 .............................. TCCAGCTCTACCGGTGCCGACTCGTGTGAGATTTCTAC 2491881 30 100.0 36 .............................. GAGAAAATCTCGGCCTTACCGGTGAAGCCTTGGCCA 2491815 30 100.0 36 .............................. TTATTAACAGATGCAATTTTGTAGAGATCACCAAAG 2491749 30 100.0 35 .............................. CCTGCTGCTCAGATTTGCCGAGAATATGGGCGTTG 2491684 30 100.0 36 .............................. TTGTTCATCTCCAACTCGGAAGACCGGCGGTGAATT 2491618 30 100.0 36 .............................. CAGAATATGGGAATGTGATTCTTTCCAACAGCCTAT 2491552 30 100.0 36 .............................. ACATCGATTGCAGTTCTAAGATGCAGTGGCTTCTGG 2491486 30 100.0 35 .............................. CAGCGTTTGGTGGTTTCAATGCGCATGTAAAGCCA 2491421 30 100.0 37 .............................. TCTTGTCAGACGACATGAACGCAAAGGTAATCAACAT 2491354 30 100.0 36 .............................. AATCACTCCTTCATTGCTAAAGAATGGGAAGATCCA 2491288 30 100.0 35 .............................. TTCCTAAAGAATGGTAATATCCACCAGATACGGCT 2491223 30 100.0 35 .............................. TCTAATCTATCAGTCACTCGTATTCAAACAGTTGA 2491158 30 100.0 36 .............................. TGTTCATGGCGTGATATATGTCACGTTTCTACTACC 2491092 30 100.0 35 .............................. AGGAGGCTCGATATGGCATTTGTACTGATGGCAAT 2491027 30 100.0 35 .............................. CGTAAGCCTTGGAATTATATTGTTGCCACAAAAGA 2490962 30 100.0 35 .............................. CCTGCAATCTCGAAGATGGCAACATACATACGATA 2490897 30 100.0 36 .............................. CGGACAACTAGGTCTAGGTGATACAGCCAACAGAGA 2490831 30 100.0 34 .............................. CATCGGAGGGGTCGCTGCTGATGAATGATATCTC 2490767 30 100.0 34 .............................. TCCACTGACACGTATATCAAGGCCCGATTCTGAG 2490703 30 100.0 39 .............................. CTGGCTAGTGCTTTCTGTCTCTCTCGATGACGCTGTACC 2490634 30 100.0 37 .............................. TTGGTGTGAGACAAACCCGCCAATTCAAGAAGCTGAG 2490567 30 100.0 35 .............................. ACTGTTCAGGGGCATAGCATGCACCCCAAGTTCAT 2490502 30 100.0 35 .............................. TCCGAATACCAGATCTTCGAGTGCATGAAAATGAG 2490437 30 100.0 40 .............................. TGCTGTCGAAAAGAGTCGCGGACTCTTTCTCCAGCTTCTC 2490367 30 100.0 35 .............................. TACGAAATGGTACATCTGGGAATCCAGTAGCACTT 2490302 30 100.0 36 .............................. TGACTCACAGGCGAGCCATGATTTGAGCCGTTGGCC 2490236 30 100.0 35 .............................. AGCATATAGATTTGAAGTCCTGAATTTCCTATCAC 2490171 30 100.0 35 .............................. CAGGAAGAAAAGACTGAGAGGAGGTGCGATGTGAG 2490106 30 100.0 35 .............................. TGCGCTGCGTAATGCCGAAGAGTTCGTCTATCTTC 2490041 30 100.0 38 .............................. TAGGTGATCATGTTTCGAGACTTGAGATCACTTATCGC 2489973 30 100.0 37 .............................. TATTGACGGTGCCGTCAGAGTCGATCAATCCTGCCAA 2489906 30 100.0 40 .............................. TGGGGAGGGCCTGAAAATGGCCCAACTCCTTTTCAGAATC 2489836 30 100.0 34 .............................. CTTTCCTTGTATGTAACGGAGTACGATTGGCCAG 2489772 30 100.0 36 .............................. TGGGTATCGTTTTCAAAAGACTTACCATTGGAACTT 2489706 30 100.0 36 .............................. ATATGCCAGAAGGAATAGAAATGCCAAAGAGTCTCT 2489640 30 100.0 35 .............................. TGTTCTCTTCGACTCTATCCAGCCTTTCATCAATC 2489575 30 100.0 37 .............................. TCTTCAGCGGTTCCATGCTATTCCCTCGCTATCGCTC 2489508 30 100.0 39 .............................. CAGGAACAGACTGGAAGAGACCGCTAACGCGGCCGGGTC 2489439 30 100.0 37 .............................. TCCGTAGGATTGCCAGGGAACTGGAACTGGCAGGTGA 2489372 30 100.0 35 .............................. GAATCATACAAGGTATCCACCCCGCTTGGGTCATT 2489307 30 100.0 36 .............................. TTTTGCCTCCCGCAATCTCTTCTTCCTGTAATCCTC 2489241 30 100.0 34 .............................. TCGCAAAGCTCGGTACTCTTCAAACTACTCTCTC 2489177 30 100.0 36 .............................. ACGATCGTTTCCGCTTCCTTCTCACTCGTGGCCTTG 2489111 30 100.0 36 .............................. TGGCTTTTGAGATTGCTTCTTCGGTTCGCTCTTGAT 2489045 30 100.0 36 .............................. TCCCCGGAATCGAATCATGACAGGCAGTTACAACGA 2488979 30 100.0 37 .............................. CAATTCTTCGAGATAAAGACCCTTCTCAACTAGAACT 2488912 30 100.0 36 .............................. TACGATAGAGGCCTATGGAAGATGCAGCGATCTGGA 2488846 30 100.0 35 .............................. TTTCGATTTCATATTTCAATGGGAGCAAGCTACGC 2488781 30 100.0 35 .............................. GCTTGTGGCAAGAGCCGGTCTATTTCGCTCATCTC 2488716 30 100.0 36 .............................. GTATCCAACCTCCGAACATAAGGGTATCTCTTGCCG 2488650 30 100.0 35 .............................. TCAGGAACGATACAGGCAAGGAAAGAGAGATTTCA 2488585 30 100.0 37 .............................. ATCCGTGAAGAAGAAAGGAAAGCAGAAGAAGTTAGTG 2488518 30 100.0 36 .............................. GCACTCAAAACCATGCAAGACTTCGAAATGATCGAG 2488452 30 100.0 37 .............................. TTCTCTGTATTGAACTCCTCAATATGCAGTTCTGCAA 2488385 30 100.0 36 .............................. TTCCAGACACTACTTTCGCTTGAACAGTTCTTGCTC 2488319 30 100.0 37 .............................. TCGTGCAGCATTTCAAAGGGCGCTTCCATAACTGCGA 2488252 30 100.0 41 .............................. AGCCTCCTTTACCAATGTTTTCTTTCTCGGCATCATCTTTA 2488181 30 100.0 36 .............................. TTATATACGAACCAACCTTGGGGTTTTGGAGAGGGC 2488115 30 100.0 37 .............................. CTTACAGTAGAAGCGGCCCTGGAGGAGGCCCGTCTCT 2488048 30 100.0 41 .............................. TTGCTAGAGAATGGTAACCCCCACAAGCTACAGCTACCCAA 2487977 30 100.0 36 .............................. GTGTGATAGTATGGGTTAGTCTATCCTGGTATAGTA 2487911 30 100.0 35 .............................. CTATTTGTTTTGCTGTGTTTTTTTGAAGCAACACA 2487846 30 100.0 37 .............................. TTCTGTTGCCGCTATTCGTATGTCAATGACCTTTTAT 2487779 30 100.0 40 .............................. CCAAGGACCAGAGATAACTCAGGTAATCCTTGAAGATATT 2487709 30 100.0 35 .............................. GTCTATCTCTCCTTTCAACAAGTCATATATCTCTC 2487644 30 100.0 36 .............................. TGATGAGGTTGACTGGTTTAACTCCGGATTGACTTC 2487578 30 100.0 34 .............................. GCCTCGTGCGATGCGAGGCACTTTTTGAAGTTAG 2487514 30 100.0 37 .............................. TGTGTAACATTGGTGATATGGGTAGTAGTAACATCAG 2487447 30 100.0 34 .............................. ACTGGGGTGTGGAGTTCGGAGAGATAACCGAAGA 2487383 30 100.0 35 .............................. TGTGAAAGGTAAACACCAGGTGCTCAAAGGGAGAT 2487318 30 100.0 36 .............................. TCATACTACCACCTCTATTCCGTGCTCTTTAGCGTA 2487252 30 100.0 37 .............................. TAGGCTGATGCCAGCCTGCCATGTTTCCTCCACCCTC 2487185 30 100.0 39 .............................. TTCTGAGCCCAGGTGGGGTTTCAGTGCCGAAAGAATCTC 2487116 30 100.0 37 .............................. TGAAACTGAACAACTCCCTGGAGAGGGAGGCCCCCAC 2487049 30 100.0 35 .............................. TCTTGCAGGAGACAGGGGAAAGGTTCTCTTCTACT 2486984 30 100.0 35 .............................. TCTTGTTTCCATAGATTCTTCCCACGATTCTCAAC 2486919 30 100.0 38 .............................. CTGTATTTGCTGGTGCTGTTAGAACTGCCGAAACTCTT 2486851 30 100.0 37 .............................. TCGTAATCATGCCTTGTCCATTCTGTGTCGTATTCGA 2486784 30 100.0 37 .............................. ATGAGATAGAGAAGATTAACCATTCCGGCCTGTTTCA 2486717 30 100.0 36 .............................. ATCTGAAAGAAATGATGAAGGATGAATCGAAGAAGG 2486651 30 100.0 37 .............................. TCGTCAAAACCAAGATTGAATGTGTCACACATTGCGT 2486584 30 100.0 39 .............................. CTATTGAAACAAAGTCTGGCACAACAGTCTATGTCAAAG 2486515 30 100.0 35 .............................. AGTTCAATCTCTCCACAACCTTTTGGCTCTGGACA 2486450 30 100.0 35 .............................. TTGTACAACTTTCAGTAAGTGAAAGTCAAGAAAGT 2486385 30 100.0 36 .............................. GAGGGGGCTGACGGTGCATCGAAGGTAATGGCGGAG 2486319 30 100.0 36 .............................. TCTAAACGAACTCGATCAATTTGCGAAGCGAGATCT 2486253 30 100.0 36 .............................. TGAAGAAATATCGTTGGCAGTTCTCACATTTAGCCA 2486187 30 100.0 39 .............................. GTCTCATCCAGTCGAGCAATGTGTCTCGTATGTCTTCGG 2486118 30 100.0 36 .............................. ACGCTTGATACTACTGGTCCGTCGTCTCCTTCTATC 2486052 30 100.0 34 .............................. CAATTTCCTCTGGTCCTGATGTTACTAAGATTTC 2485988 30 100.0 38 .............................. TTCTCCTTTGGAACCAATTCCAGATCTCCAAAATTCCT 2485920 30 100.0 32 .............................. GCAGGAATCTTAGAGATTTCAAGCTGCTTCCA 2485858 30 100.0 35 .............................. TTTAGTAGCTGTTGACGGCCTTCGTAATACGCCGC 2485793 30 100.0 36 .............................. TTAATGTTCCCCAGATTATTCCCCGGATTACTTCCC 2485727 30 100.0 38 .............................. TGGGAACGTGACAAGATCTCTTACTCCACCGACTACTT 2485659 30 100.0 40 .............................. ATCGCTTCTGGACAATAGATTCTGAATTTAGTTTCTCCCA 2485589 30 100.0 38 .............................. TCGGCACTACCGTTGATAATGTTTCGGATGGTACTACA 2485521 30 100.0 35 .............................. TACATACTATAATTGTAATTTTCAACGTTGATAGC 2485456 30 100.0 38 .............................. TTCGTTATATGCAACAATCATATAATCGCACGTGATAA 2485388 30 100.0 33 .............................. CATACTTCACGCCCTTGATGTTCTTCTGTTTCA 2485325 30 100.0 35 .............................. TGCCATGCAGCAGCAGAGCTTTGCAATGAACGTGC 2485260 30 100.0 34 .............................. TGAGCTCATCTGCTCCTTCGATCGTGACTTTAAG 2485196 30 100.0 35 .............................. TCAACGAAGTACATGAGAAAGATTTCTGCGCCATA 2485131 30 96.7 38 ............................C. CACGAGTGACACTGAGAACAATGTACATTCTGATCCAA 2485063 30 100.0 36 .............................. TGCTTCTTTGTTCATCGCTTTTAAGACTCAAGATAG 2484997 30 100.0 34 .............................. AAATCATCTATAGTTCTAAGTGTTGCCCAGCTAA 2484933 30 100.0 35 .............................. GTGCTTACACTACCATCAGTCAAATATAAAATGAA 2484868 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 108 30 100.0 36 GCTTCCAGACTACCTATGAGGAATTGAAAC # Left flank : CTTTACAAAATAGAAAAGCAGATAACAGGCGAGCGTGGATACATTCCCTGGAAGGAATAAAGTGTGTTCATTCTTCTCGTCTATGACATTGGTGAAAAGAGAGTGAACAAAGCTCTAAAAATCTGTAGACAATATCTGGACTGGGTTCAGAATTCCGTATTTGAGGGAGAGCTAACAAAGGCAGGCCTCGAAACACTCAAGAAACGCCTAGGAAAAATAATGAACAAAGAAGAGGATTCTGTAAGAATCTACAAGCTCAGGTCAGAAGATTACTTAACCATGGAAATACTCGGAATAGATAAGAAACAAGTAGCTGACGACGGAATTCTTTAGCTCCGTCGACCCCTGATAAATTGAAAACACCTGGGGATCGACAGAAGCATATCAATTCAGCTCTTCAGTTTTGTGTGCAATTCATGAGAAAATAGTCTTTGAAAAACAGGCAAAAACTCATATTGCCTCAAAATGCTGAAAATCCTTTATAATCTATATAGTAATGG # Right flank : TCCAGAACATGGCTGGATGGCTGCAAGCCTTGATAGGGCTTCACAGGTTCCTAGAAAGCCGAATCCATTCATCAATAAACTGGTTTGATCGTTTCAAAAAAACAATATATGCTTGGATTTTGATTTATTTGTTACAAGAGATATAATGAATATAAATTATGCCTTGTGAAGTCTTTGCCGGAACAATTATGGATAGCTTGAATGGGGTATTACGTTGTCGCTTTCACATTAATTGTCAAATGGTGTTGTACAAAGATGAAATGAGGTAATGGTTTTGCAGTTGCTTGCGATAAGTAAGGCTCCGTACTGCGTTCCTCGAAAAATCATCTTGATCCATTTGTCGCCAAACAGAATGACGAATAAGCGAGAACAATATCGCTTACTAAGGGTTACTCGACTCTCATGACAGCAGACGGGAGAAAGAAAACATATTTCTACAATCCAGCAGAGAAAGATTTCGCAATTCAGATTCAGGAAAACCTCAACAGAAAGGCAAGTGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCCAGACTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA //