Array 1 83301-86508 **** Predicted by CRISPRDetect 2.4 *** >NZ_PZKN01000020.1 Desulfonatronum sp. SC1 NODE_20_length_86633_cov_62.3868, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 83301 28 100.0 32 ............................ ATCCAGGTGTCCGGCGGTACCGTGGCCGCTAT 83361 28 100.0 32 ............................ CTAAGTTTATATCACCGTTTACCCCGACACCT 83421 28 100.0 32 ............................ TCGTGGAGGAGATGCACCGTTTCAAACACTGA 83481 28 100.0 32 ............................ TTGATGAGCGCCAACGCTCAACGGCCCACGGC 83541 28 100.0 32 ............................ TGATCCAGCAGGGCCATGCGGTGATCATACGT 83601 28 100.0 32 ............................ TACGCGGAGATGCAGATCCAACTCATCGACGC 83661 28 100.0 32 ............................ ACCCCGTCGTCGATCGTCACGCTTCCCGGCGC 83721 28 100.0 32 ............................ AGCTCGTCAATCACCAGCGTGGACCCGTGCTC 83781 28 100.0 32 ............................ ACCGGGACAGGCTCCCAGGTCGCCTCGATCTC 83841 28 100.0 32 ............................ TCAGCCGTGTTCCGTATGGACCGGCGCAGGTA 83901 28 100.0 32 ............................ GCGTAGTTCTTCCTGGCTCATGGTTTTGCTCT 83961 28 100.0 32 ............................ TGGATACGGATTGTTGCAAAAGGGATATCCGT 84021 28 100.0 32 ............................ TGTTGAGAGCGACCCCTCCACCAGGGCCACGT 84081 28 100.0 32 ............................ AATCACGTTCCTTCACCGGCTTTTTTCGTTCC 84141 28 100.0 32 ............................ TTTCAGGAATCCCAGGCGGTCCCAGAGAAATT 84201 28 100.0 32 ............................ TTCCCCGAGGACACCATGGACACGTTCAAGAC 84261 28 100.0 32 ............................ TGGATCAAATGGCGGAGCCGCGCCCGTGTAAC 84321 28 100.0 32 ............................ TCAGATATGCCCCGCTGGAGCACGACCACGAC 84381 28 100.0 32 ............................ ATGTGCCGTTTGGCTGCTGGTACGGCATCGAG 84441 28 100.0 32 ............................ CCGTAGATGATCTCTACATTGCCGTACTCGTC 84501 28 100.0 32 ............................ AGTTTGGCGGCCTCCCACTGCTCGATGAACTC 84561 28 100.0 32 ............................ TTTGAGATAACGCCCGCTGAAACCCTGGAGCG 84621 28 100.0 32 ............................ ATTTCAGCAATGCGTCCATCACAGCGGATATT 84681 28 100.0 32 ............................ TACCAGCATGTGGCCGAACTCTCGGGCACGTC 84741 28 100.0 32 ............................ ACCCAGGAATCAACGCCGCCCCGTTGGATACC 84801 28 100.0 32 ............................ TTTGAGGCCGTGGTGGAGATGTCCGAGGGGAG 84861 28 100.0 32 ............................ TCCAGCTGAGTGGTCAGGGTCGCGGCGTTGGC 84921 28 100.0 32 ............................ AGCCCGTGGCCCACGCGATCCGCGAAATAATC 84981 28 100.0 32 ............................ AGGAGCACGGAGCAGGTGTCGGCCTCGGAGTT 85041 28 100.0 32 ............................ TGTTCTATCGTCGAATCATAGACCACCTCTTC 85101 28 100.0 32 ............................ CGACGTGTACGAGGTGCGGCCCGAGGTGGTCG 85161 28 100.0 32 ............................ AGTTGGTCCAGGGACCGCAGCCCGGCCAGCAG 85221 28 100.0 32 ............................ TCCCAAAAACATCATTTGGCGGTGACAAAAAC 85281 28 100.0 32 ............................ TCCGGGTCTGCGTTTTTATTCCATCCAGGATG 85341 28 100.0 32 ............................ TCAGCGGCAATTGAGATGCATTCTTCCCAGTA 85401 28 100.0 32 ............................ ATTGAAGAAAATAACCGGCTGATGCAGGAAGT 85461 28 100.0 32 ............................ AGTCACGGAACTCTTCACGGCCACCACCAAAT 85521 28 100.0 32 ............................ ATGGTCTATTCCGTCATCGAACAAATCAAGGC 85581 28 100.0 32 ............................ TTCCTGAAGCGCTGCGTCCACAACAACGAGCA 85641 28 100.0 32 ............................ TAGGTCCAGCGTCAGGCCGTGCTCCGGTTTAT 85701 28 100.0 32 ............................ TTTGTCGCCTGGCACGAGACCAACATGGGCGG 85761 28 100.0 32 ............................ ACGCGGCCCAGCCCTCTAAATCCGGGATAAAG 85821 28 100.0 32 ............................ ACGGAGATCCTGGCCTGGTTCCAGCGCCGGAT 85881 28 100.0 32 ............................ GCCCGGTGACCGTGGTCCTGGAGTCCGAACTG 85941 28 100.0 32 ............................ AGCTTGGCCGGGCCTTCGTGGTACGGATTCAG 86001 28 100.0 32 ............................ TGTCTCGGATGTATCCAGCTTCATTTGGCATC 86061 28 100.0 32 ............................ AAGTTGAGCAGCTTGGCGAGACCCCGTCCACC 86121 28 100.0 32 ............................ TAGAACCTCTTGACCAAGTGCGGCATCAGCTT 86181 28 100.0 32 ............................ CGCGCAAAAACGCCCGAGGGCACCAGCCGTGT 86241 28 100.0 32 ............................ TCATGGATCGCCCCGGCAATCTCCTTTTGGGC 86301 28 100.0 32 ............................ TCAATGCCGTTATCGCGGGCATAGCCCCAGAG 86361 28 100.0 32 ............................ ATTGTGGGCCTCGCTCGTAGGTAGGTGAAAGA 86421 28 100.0 32 ............................ TCGGGGAGGAGATGCACCGTTTCAAACACTGA 86481 28 96.4 0 ..........................C. | ========== ====== ====== ====== ============================ ================================ ================== 54 28 99.9 32 ATGAACCGCCGCGCAGGCGGCTTAGAAA # Left flank : GGATATTCCAGGAGCACTGTCCAACCTACGGGATTACCTGCACGTTACTTCACCCCGACTGATACCCGGATCAAGGATCAAAGGTTATGTTGCCTATTCCAGGCTCAGGCATGACCACGGCAAAGAAAAACTCATGAGAAGAAGAATGAGACGGCATGGTGTTACCAGAGAAGAGGCTGAAGAGTACTATGCTGACTATCAGCAAGATTTTTTTCCTGACGGCCCTTTTGTCCTGATTCGAAGTACAAGTACGGGGAACAATACCTATCCATTTTATATCAGACGCCTTTTCTTGGACTCCCCTGGTGAAGGAAAATTCAACACCTTTGGGATCAACCCCGCTGCAGGCGTGGAGTATTTCTGATCGACCTTGCTCATTGCAACGCGAACAAAAGCATAGCAATTTCAAATGGTTAGATTGCACATCCACAAGAGAAGGCAAAGCAGGCACTCCTAACATAACCACTTGTTTTATTAATATTTTCTCTCAACTTGTTCTT # Right flank : GGACTTTAACCGCATCGCGCCAAATCCAGCCTTTTCCGCAATAATTTCTGCATGTTAACCTGGCCCTTTGCGTAAGACCCTACTGATATCTCTGCTTTTTTGTCAAAAAAACGTTTAATTTTATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGAACCGCCGCGCAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTAACCGCCGCGTAGGCGGCTTAGAAA with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 94-301 **** Predicted by CRISPRDetect 2.4 *** >NZ_PZKN01000254.1 Desulfonatronum sp. SC1 NODE_255_length_340_cov_43.5915, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 94 28 100.0 32 ............................ ATCCAGAACCTCTCCGGCTCCCTGAACATCCT 154 28 100.0 32 ............................ TTGGAGAAATTCGCCGTCACCTGATCCACGCA 214 28 100.0 32 ............................ CTAAGTTTATATCACCGTTTACCCCGACACCT 274 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 4 28 100.0 32 ATGAACCGCCGCGCAGGCGGCTTAGAAA # Left flank : AAATGGTTAGATTGCACATCCACAAGAGAAGGCAAAGCAGGCACTCCTAACATAACCACTTGTTTTATTAATATTTTCTCTCAACTTGTTCTTA # Right flank : TCGTGGAGGAGATGCACCGTTTCAAACACTGAATGAACC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGAACCGCCGCGCAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTAACCGCCGCGTAGGCGGCTTAGAAA with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 259-526 **** Predicted by CRISPRDetect 2.4 *** >NZ_PZKN01000054.1 Desulfonatronum sp. SC1 NODE_54_length_14087_cov_60.9203, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 259 28 100.0 32 ............................ TCCCAGATCACCCGGAACTTCGGCACATAAAA 319 28 100.0 32 ............................ ATTGTGGGCGGCGCGGCGATTCCGGCGCTGTC 379 28 100.0 32 ............................ ACCAGGAAAACCCGGTCCTTCAGGCCGCAATA 439 28 100.0 32 ............................ CATCGAATCCAAAGACCCCTCGGGCTGGAAGC 499 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 5 28 100.0 32 ATGAACCGCCGCGCAGGCGGCTTAGAAA # Left flank : ACAATGCAGCAGATGCGCACACTCCATTCATGTCTTTGTTGGAATGCCGGGGCACGAAAAGCGACCCGCAAGCTTGAGGAACCAAGCGACGCCCAGGCCCAGATACTGAAGGCCATGGGCTACGGAGTGAGCAGTGGGGTCTTACAGGAATTGGCGACTTAACACACCGAAATCACTTGCGTTTTCAAAAAAAATGACGTTCAATCTGTTAAACTCCTGTTAGAAATCCGCGCCCAAGACGGAGCACTGAACATTCTCA # Right flank : AATTGGGAGCAAGGGGCAAAAAAAATGAGGCAGCACCTGGACTGCCTCGTGAGCCTCGCGTGGCGGACTCCCACACCCCGCCAACGGAACCTTTGGGCCCCAGGTCTGCCCTCAGCGGTTGCCGGGAGATTTTGCCGCGAAGCCTTGAACGGAGAAGCTACGCCATGATCGAAGTGAAGGTCAACGACCAGGATGTCATCGACGCGCTGGAGCGTTCCCCACACACGTGGGGATGAACCGGCGTTGCAGTTGTACGCCAAGAACGTACAACTGCGTTCCCCGCAACCGTGGTGCCAAGCGACATCAGAAAACAAGTTGTCTTGGGTCGTCTCGCGCGGGAGGGGCGTAGACTGAATCTGAAACCGTGACAAATTGTCACGGTTTTTGACCAGTTTCCACCGGAATCAATGGTCACGATCCTCCGGATCGGCTGGTCAGATTCGCCGGAATACGCTGATGAGAAGAATCAGTAATGATACCTGGCCTGGAGAAAATCGATC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGAACCGCCGCGCAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTAACCGCCGCGTAGGCGGCTTAGAAA with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //