Array 1 7016-7844 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHLXC010000106.1 Leptospira interrogans strain Che_2014 k141_256, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	====================================	=====================================	==================
      7016	    36	 100.0	    35	....................................	CCAGCGGGATTCTTGGAAATAAATTACTCAACAAA  	
      7087	    36	 100.0	    36	....................................	TTAAATCGGAAGCATGTTGCGACTCGATTTCGAAAT 	
      7159	    36	 100.0	    37	....................................	CAAATATTCATGGCGCCTTGTCTCCCTGGGCTTCACA	
      7232	    36	 100.0	    36	....................................	TTTTGGACAACAACTTCCTCGCTCCCCGCATGTTCT 	
      7304	    36	 100.0	    37	....................................	TAACAACATAGTCTTTAGAGATAGAGGCCATGACAAG	
      7377	    36	 100.0	    37	....................................	ACATACTAATTTTTGATCCAACTGTTGTTGTGTTAAT	
      7450	    36	 100.0	    36	....................................	ACAAAAAAAGACAAGTTGGTCCGGAATGCGTTTGGC 	
      7522	    36	 100.0	    36	....................................	CTAGAGTGGCGTGAATTTTTGCATGAGTTGACCCTT 	
      7594	    36	 100.0	    36	....................................	TATCGTTATCCGCCAAGGCGTTATCAGTTCTACAAT 	
      7666	    36	  97.2	    35	.....................G..............	TTAACAACCATATCTGTAGTCTTATATGCAATTTT  	
      7737	    36	  97.2	    36	.....................G..............	ATCGGAATATTTGCCCCTTTTGTATCATAGTCGTAA 	
      7809	    35	  94.4	     0	..............................T..-..	|                                    	A [7837]
==========	======	======	======	====================================	=====================================	==================
        12	    36	  99.1	    36	CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC	                                     	       

# Left flank :   AATTGGCAAAAGTCACCGAAGAAGAAGACAATATATTTTATCTGACTCTTTGCACCAAGTGTGCTTCGGGCGCCCATACCCAAGAAAAAAAATCCGCGTGGCCAGAAGCTCCAAAAACATTAAAAATTCTATAATTCAAGTATCTCTTCAGGGCATAGACATAATTCTACTTAAAAAGCAAAACTAAATCTTTGAATCTATATTTAATTCCAAGACATATCCAATCTTTACTCGGATTCAGAAATAGACCCTATCTAATTGATTGCCCAACGCTCGTTTTTCTTTCTTGTGAAAATTCCAGCTAAATTTATAATCGGTGACGAGCTTAAACATACTTGAATCTTAATATTTGAAACAAAATGATCCTTGGAAACAAAATATGCACTTCTGAAAAAACCGAACATGAAAAATAACGATAAAAAACGATATACTTGTTCTCCTCCTTTGAAAACACTCATATCCACAATTTATGCTTATAAAAGCCATTTAAATAAAATGCT
# Right flank :  GAAGAGAAGATTTGTTTTAGCCCAAATTGTTTCGCACCAAACGTGCAAACAGATAAAATGTAGGAACTACTACTTTTCCGAAAAACTGTGCTTTGTTCAAATAAATGTGGGAACTCCCACTTTGAAAAAAGAAGGTTTCTG

# Questionable array : NO	 Score: 3.21
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.80,-4.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [1.05,0   Confidence: HIGH] 

# Array family : NA
//