Array 1 413878-412240 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048928.1 Schaalia turicensis strain CT001 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 413877 36 100.0 28 .................................... GGTGGCCTTGTGGTGCGGTTGGGAGCCA 413813 36 100.0 28 .................................... TCGCGATGACGCCGGGCAAGTCGTCGGC 413749 36 100.0 28 .................................... TTCGCCATAGTGAGCGCATGAGCGCGTC 413685 36 100.0 29 .................................... TCAATTATCGACCCCGTTACCCGCGTCGT 413620 36 100.0 28 .................................... CAACCGGCGGAGCATGGTACGCCAACCG 413556 36 100.0 28 .................................... ATGGAGATAGCCAAGATAGAAAGCTTAT 413492 36 100.0 28 .................................... TGGACGCGGAACTCCCCACGCTTCGCGC 413428 36 100.0 28 .................................... GGTGCGAGGGGATTCCGAACATTCGGGC 413364 36 100.0 28 .................................... CCTGTTGCGGTGGCTTGTATGTGGTCTG 413300 36 100.0 28 .................................... GACGCGACGTACACCCTCTGGTCGGACA 413236 36 100.0 28 .................................... GTGTTCACACCGGCGCTTCGGCGGTTGG 413172 36 100.0 28 .................................... AAGTCCACCGCATAGGCGACCCGCTAGA 413108 36 100.0 28 .................................... TGTTGTGAGAGTTTGCTTTCGGGGACGG 413044 36 100.0 28 .................................... CGGCGATCCGGTCTAACCCGCGCACCAT 412980 36 100.0 28 .................................... GGAAGTGATATAAGGACTCCACCGTTGA 412916 36 97.2 28 ....................A............... TGAGAGAGGGATTCGAACCCTCGAAACG 412852 36 100.0 28 .................................... ACACGCGCGATAGATCTCGTCTGCAAGG 412788 36 100.0 28 .................................... TTTCGTGCAAAAATGCGTTTACTACGGG 412724 36 100.0 29 .................................... TCGGAAGAGTTGGAAAGTGTTGCGATGGA 412659 36 100.0 28 .................................... CGGTTGAGCGCATCCACTCGGTGAACTC 412595 36 100.0 28 .................................... CTACCTCACCCCCGAAGCCACCGAGAAA 412531 36 100.0 28 .................................... CCCGCAACGCGTGGAACGGTCTCGACCA 412467 36 100.0 28 .................................... CGGACTTGGCCGCCATGTTCGGCGGGAC 412403 36 100.0 28 .................................... TCACCTCTTACGAGATGATCGAGAACTT 412339 36 100.0 28 .................................... ACATCTCTGAGAGCGCGTCCAAGGCGGA 412275 36 91.7 0 .................................CAA | ========== ====== ====== ====== ==================================== ============================= ================== 26 36 99.6 28 AAAGAATATCAAGAGTTCTGGTAACTGATTCCCAGC # Left flank : GATGCCGGAAGTGTTCCACGTGTCTTATTAGATCTCGCCCAACAGTATGGGCGTTATGTCGAAGGAGATATTGAAAAACTCCCGGTTCCTTCGTGGCAGGGGCCATCAGCGTTGAATACGGATCTCAAGAATGCCTGATTCTCCGATGTGGTGTGTTGCGATGTTTGATTTGCCTGTTTTAACGGCTCCGCAGCGTCGTGAGGCAACACGTTTTCGAAAATTCTTGCTTGATCGCGGTTTTTTGATGGTTCAGTTCAGTGTGTACGTAAAGTATTGGCCGACTGGCGGAATCGATATGACGACGATCAAAGCGATTAAGGGATCCTTGCCAACGGGAGGGAAGGTTCGGGTGCTTGCCGTGACTGATCGCCAGTGGTCGTCTGCTTACTGTTTTGAGAACGCACGTGAGCAAGTAGCAGATGAGGCGCCAGAACAATTGATGATTTTCTGACGCCTCAAAGGCACTTTCCCGCGCTATTCTGCGGAAAACCACAGGCTCT # Right flank : ATAATAATTTCAGTTCAGAAAAACACCATCAGAGCTGGAAGCACACTTAAACGCAATACGCCTTGGGGGCAGGTCGCATTTGCGCCCTACCCCCAAGGTCTGTGCGGGACCTCGTCGATTATGACGAAGCCCGACAGTCGAAAACCGGAACTAACGCACCGACGTGTGGCACTCAATCGAACGCACACCCCACCATGCGACACCGATTGCCAGCAACACCGCCCCTACGGGCGCACCAATGCCGACAAACTGCGGATCCGTATCAGTCAACAGCGCGTTCACCAGGTCCGTGACCCAAAAGCCGAAACGTAACTCGCCCGTGTTGACATCCATCATCAGCGGGAAGAATGCCATCGCAACAAAGGTCACCACCTGATTCGCCAGATAGAGGATCACGAAACCCACTATCGCAGCTCCAAAGCCATGCTTCTGCCAACGCTCGCGAGCACTCAAGCTCATTCCAGCAGCAACCTCAAGAACAATCGTCACCAACTGCACCA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAAGAATATCAAGAGTTCTGGTAACTGATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //