Array 1 34151-35524 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOJS01000023.1 Parageobacillus thermantarcticus strain M1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 34151 30 100.0 38 .............................. ATGATAAAAGCGCGGGCGTATAGACAGAAAGAGCGCGC 34219 30 100.0 36 .............................. AACTGCTCAAACAAAACAAGGACTTTGCAGGGGCAT 34285 30 100.0 35 .............................. TCCGTTTCGGAAGTTACATCGGAGGTTATTCAAAA 34350 30 100.0 40 .............................. TTGATTGCCATCTATTATCATCCTCCTTGTTTGCTCAAAA 34420 30 100.0 36 .............................. TCCAAGCTGTTGTCGATGCGGTACACGATACGGATT 34486 30 100.0 35 .............................. TTCCGAAGCTTTCGATTAAGCTCCATAAATTCGAA 34551 30 100.0 37 .............................. TTGAACATGTCGTAAATAAGCCCTTCTGCAAGCACCC 34618 30 100.0 40 .............................. AGTAAAATCGGCGTCAAAACACGCATTCCTAAATGGCAAC 34688 30 100.0 38 .............................. CCGGCCGAATGGACGCGGAGCCGATCGGAGAAACGAGG 34756 30 100.0 41 .............................. ACACAAACGCCGCCGCCGCTAGACGGAAGCGACGCAGCAGC 34827 30 100.0 36 .............................. GAAGCAGCGGAGCGAGAACGGCAAATGATGGACCGA 34893 30 100.0 39 .............................. TGAGAATGGCTTAGTCCGCGTCCGCCAAGCTCTCACTTA 34962 30 100.0 38 .............................. TTTAGTTCTTTATTATTTAGTAGTTGCGGATTTTCCAT 35030 30 100.0 39 .............................. TTGACCCATATAACAAAAGGAGATACCCAAACGCTCATA 35099 30 100.0 36 .............................. AAGAGCATGGCAGGAAAAGCGATGAGCGGCGTTAGA 35165 30 100.0 37 .............................. TACAACAAATAATCAAAAAGGAACAGTTGCTATTGAA 35232 30 100.0 35 .............................. TTCCGAATGTACGGAAAAAGGTGGCGATGGTAGCG 35297 30 96.7 37 .............................T TTTGATTATGTTACTGGCTTTTTAGCAAGTGCTGTGG 35364 30 96.7 35 ......................A....... TCATGTCGGATTTGAATTTCTACCACTTGCCCTTT 35429 30 90.0 36 ......................ACC..... ACTGCCGATGAAAGCGTCTATACTTGGGAAAGTATC 35495 30 73.3 0 .......C...GT..G......A...GG.T | ========== ====== ====== ====== ============================== ========================================= ================== 21 30 97.9 37 GTTTGTATCTTACCTATAAGGACTTGAAAC # Left flank : TATGGTCGCTCTGCAAAACTTGTCTGGCAGCCAAATCGTACAATGGAACGTGCAAATGGCGGGAGCGCTGCTTGCTGCTTTGCCAACATTGCTTGTATACATTTTTCTAGGCAAGTATTTTGTTCGCGGTTTATTGGCTGGCTCGGTGAAGGGGTAAATAATGTATTGCTGCCAGAATGTTTGTATGAGGGGGATCTGTTCTTTTTTAGAGAAATACCCGATGTTCTGTTTCAAAATTATCGGCCTAAGCCTTTTTTAGAAACTGATGGGGTACCGACTATTCGATAATGCCAAAACATCCTTCAGCAAGAACTTCCATGTTGCTGTCCGTTTGTCGTCGATCTCCAATACTGCAAAAATCTCTGGGGATCGACGACAATTCCTTTTCTGCCTCTATCCTTACAGCCATCACCAATCCGCGCTATTGACGCAATTTTCAAAATCGCTTATACTGGACTTGCCATGTTTTGAAAAGTATTAATATATCAACGTCTTTTTGG # Right flank : TTTTGTCAATCTCCATCCTTTCTTTTTTTGCGTGTTTTTATCGTGCCGATTGAAAAACGGATCAATATAAAAACCCGCTGATTTTCAATGGTTTTTACCCGCTTGTCCGCCAATTTTGTGATACAATGAAGGCGGAAATCATAGAGACGAAAGCGGGGAGAAATTCGTGTATCTTGGGGCGATTGAAGCAGGTGGTACGAAATTTGTATGCGCTGTTGGGGATCGCGATGGAAAAATAAAAGAGAGAGTGACGTTCCCAACGACAGAACCGGAAGAAACGATGCGCCATGTCGTCGATTTTTTTAGGCAGTATGAATTAGAAGCGATTGGCATCGGTTCGTTCGGTCCGATTGATTTGCGTCCTGACAGCGCGACGTATGGCTATATTACGAGCACGCCGAAACAAAAATGGGCGAATTTTAACTTTGTCGGCGAAATGAAACGGCATTTTCGTGTGCCGATTGGCTTTGACACGGATGTGAATGCGGCTGCGCTCGGCG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCTTACCTATAAGGACTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 39843-41316 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOJS01000010.1 Parageobacillus thermantarcticus strain M1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================================================================================================================= ================== 39843 30 100.0 38 .............................. TCACCCTCCTATCAAGATAATCCGTGTTTCTCCAACAC 39911 30 100.0 39 .............................. TGCTGGTTTGAACATGGGAGACGATGTGATTTATGCAAA 39980 30 100.0 38 .............................. TCACCCTCCTATCAAGATAATCCGTGTTTCTCCAACAC 40048 30 100.0 39 .............................. TGCTGGTTTGAACATGGGAGACGATGTGATTTATGCAAA 40117 30 100.0 35 .............................. TCGATTCGTTCATCGTCTAGGGTTTGATGCGCGCG 40182 30 100.0 37 .............................. GAGACGATATTCACGTCTCAAAAACCAAAAGGCAACA 40249 30 100.0 39 .............................. AAAGACTGGAAAGACTGCGAGGAATACCTTTCTACAAAA 40318 30 100.0 35 .............................. ATTTTAAGAGGAGTTTTTGCCGCCCTCCATAAGGA 40383 30 100.0 37 .............................. AAGGATTGAAAAAAGTGGTCAACGTCCAGCTTGATCC 40450 30 100.0 38 .............................. CGGCGCGATGTACGCGGAGCGAAAGCCGATGCCATGAC 40518 30 100.0 38 .............................. ATCTTTGCGAATAAATCCTCTTTTGGGATCGGATTGCG 40586 30 100.0 36 .............................. TTGACGGTATTTCTTTGGCGTGAACTTTTGTTTTGC 40652 30 100.0 36 .............................. TCGGCAGGTAGAATCGACACGAAGCCCTCTTCTTCT 40718 30 100.0 37 .............................. AAATTTTTTGCGATTTTTTCAAAAAATAAAAAGACAC 40785 30 100.0 38 .............................. TACACAACAAATCCTTTTCATATTAGAAATGCTATCAT 40853 30 100.0 38 .............................. TCAGAATCTCCACCAATTCCATTATCACCGGAACCTCC 40921 30 100.0 38 .............................. TGGAGAGATTCGAAGCTAAGCGCCAGCGTCTGTCTAAA 40989 30 100.0 35 .............................. AACACTTTGCAAAAGATTTAGCGCCGGGACAATAT 41054 30 93.3 37 .....C...............G........ GCCGATGATCGACATCGATGTCATTGGCGAAAAATAT 41121 30 93.3 135 .....................G......C. CATCGGGACACGAACGCGATATTACCATCAATGTGAATTTTTATTCTACCTATGGTCGAAACATGTTAATCAGGAAACGCATTCTGCTTGTCCAATTTTGCATGTATCTTTTATAATGTTTAATATGGATTATCG 41286 30 76.7 0 .AACA........T...A.A.......... | T [41297] ========== ====== ====== ====== ============================== ======================================================================================================================================= ================== 21 30 98.3 42 GTTTTTATCTTACCTATGAGGAATTGAAAC # Left flank : GGTCAAAAAGGAAAAGGCATGGTGTACATTGTCATTGCCATATTTGTCGGCAGTTTCGCCCGCTATATATGGCATTATATTGCAGGAATTGTGTTTTGGGGCAGTTATGCGCCAAAAGGAATGTCCCCAGCCTATTATTCCTTAACTGTCAACGGTCCAGCTTGGCTTGGCTCATTTCTATTATGTGCGGTTGTAATATTGATTCTCGTTTCCGTATCTCCGAAGTTGCTGCAGGTAAAAAGATGAATATATTTTCATGTTTTCACGTTTCCAGATCATCAACATGGAAATATGGCCGATAACGCGATCGTATTGCTATCCATGGCGAAACCTGTCGTCGACCTCCAATCGTGCAAAAAGTCCGGGGGATCGACGACAGGTTCTTTTTTTTGATCTCTATTACAGCCAACATGGATTTGTTTTATTGACAGAATTTTATAACATGTTTTATACTGTACTTAATCATTTTTAAAAATATTGATTTATCAGCGTTTTTTGGG # Right flank : CATTAATAATGTGATTATTATCTTACCTATTGAGGATTAAGTAAAAAAATTAAAAATTTTTTGTTTTTTATTGAATTAAATTAATTAATAATGTTATTATAAAATTGGCATTTTTGGAAAGGGAGGTGCGAAAATGTTTAGAAATCATCACAACGATGACAAAAGGGGAATGGTATGGTGAAGAAATATTGCGTAACAAGAAGCGTTAGCTTTTTAGAAGATAATGTGATGACAAAAGTTGTATTTTTGAACAAAGTGTTAATTATGTGTAAAATATTGAAATATCAGTTAATTTTGATAAAATGAATTTAAATATGTGGCGAATATTAGAGCAAGAACTAAATCGATGATTTTGCGGTTCTTTTCATCTATTTACCCAAAAGTGAAATTGAATCTGTGGATGTGGAGTTTTTACGATTGCAGCAAAGTTGGACAACTTATGCTTTTTCCTTTTGTAAAGGAGGTGCAAGCGGTGATTAAAACAATCTACACTCTTGGCA # Questionable array : NO Score: 8.71 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:-0.45, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 895-2434 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOJS01000086.1 Parageobacillus thermantarcticus strain M1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 895 29 100.0 35 ............................. ATAGATAAGAGGAAATGCAAGCAGTCTGCAAATTC 959 29 100.0 36 ............................. AAGAAGTTTTCATTTATTGTCTTCGTGGAGTGAAGC 1024 29 100.0 34 ............................. TGAGTGGGGCGGCAGGTGGACGATTCGGAAACGA 1087 29 100.0 37 ............................. CGGTTTCACAAGAACAGCTGCAAACTGATCGATTTTG 1153 29 100.0 38 ............................. AATTAAACTCTCTTATTACTGGATTGGTCCATTAAATC 1220 29 100.0 37 ............................. AGGAACAGGAAAGGTTGTAGTCAAAAATCCACTCCTT 1286 29 100.0 39 ............................. AAAGAATATCCTTGCAATGTTATTGTGCATTCAGGCGAA 1354 29 100.0 39 ............................. AAAGAATATCCTTGCAATGTTATTGTGCATTCAGGCGAA 1422 29 100.0 37 ............................. TCACATCACCAGCTTCCAGCCTTTTCTGATACGACTA 1488 29 100.0 39 ............................. GGAGCTGTTTCCTTTCCGTATGTTTGATAGACAACAGAA 1556 29 100.0 38 ............................. GCAGACGGAGAAGATCAGATCAAATCAGCGATTATTCG 1623 29 100.0 39 ............................. TTGTTTTCGGGGTGGCGGGCGGCGAGACTTTCCGGCAAA 1691 29 100.0 36 ............................. CCATCTGTTTATGCAAATCATTGATCCGCTCATCAG 1756 29 100.0 36 ............................. ATCAATTCATTAAGTTTTTTGGTTGCTTGTGTTATT 1821 29 100.0 36 ............................. TTGTGTCCACTATCATAAGATAATGGACACTAGCAA 1886 29 100.0 37 ............................. AATGATGGAGATCGGCCGACAATCTCTCCTTTTTTCC 1952 29 100.0 35 ............................. ATTGAGATTAATGGCAAAAATGTCGTGCGCGGCGT 2016 29 100.0 37 ............................. AAGTTTCAACAAGAAGTTTTGAATAAAATGCTCCCGA 2082 29 100.0 35 ............................. GGAGAAATAGAAATGCTCTGAAAACCGGCGAGTTT 2146 29 100.0 37 ............................. TTGAACAATGGAAAAAGGAGCGGTTGCGTTCATGAGA 2212 29 100.0 35 ............................. AACAACAACCTACAAACGTCTTGGCGTGACCTTCA 2276 29 100.0 37 ............................. GATTGAAGGATAGACGTTTTCCATGTCCTCACCCCTT 2342 29 100.0 37 ............................. ATGAAATACGTCATCTAATGTTTTTCCTGATTGAATT 2408 27 86.2 0 ....................--.G....C | ========== ====== ====== ====== ============================= ======================================= ================== 24 29 99.4 37 GTTTTATCTGAACGTAGTGGGATATAAAG # Left flank : AGACCCGCTGAATGCGCTCATCTCATTCGGAAATGCGCTTTGCTATACAACGGTGTTGTCGGAAATTTACAAAACTCCGCTTGATCCTGCCATTAGCTTTTTGCACGAACCATCTACGAAGCGGTTTTCACTAAGCTTGGATTTAGCCGAAATTTTTAAACCGCTTATATGAACTTGAATTAATTATAAATAAGCAAGAAGATTCAATCTATCTTTATCAAGTGTCCAACCCAAAAAACATAAAGAAGCAAATTTTTGGGCAGGAACGCAATTTTGATGATCTATTTATTTAACGGTGCAGAGCCGTTCACATGTTGCAGTAAACCCCATTTTTATCTAAATATTGAAAAATGCTTGATATATCAATAAAAATCACTTAATCTTTTTACCAAAGCAGGAACACAACTGCCGCTTTACTGCAAAACTTAACGTACTGATGTGATCAATGTTTGAAGAAAAACATTGATACATCAACATGTTGCCGTTGTTTGAAAATAGGG # Right flank : CTAGCACATTATTTCAGAATTCCTTTTTCAAATTATTTCGTAAAAATTATGAATAATACGCAAATTTTTGTGAATTATTTCGGATTTTGCAGATTATTCCGAACGATTGCACACTCTTTCGGATGATCATTTCCAGCACGCCCGATGAACGGGCCAGAAAAATGGATGGTAAAAAAAGGTATACATATTCGTCTATCATGGCAAGGGATGAGAGTCCGAAAGCGATTACGGATAAAATTCAAAAAAATGGTTCGCCAACCTATGGCTTACACCTGTTTTCAGCGAACCAAAAAAGTTCCCACAAAGTCTTGACTGACTTTTTTGCATTCCAATGATTTATGCCGTATCCTAAGGAACGAAGGGAGGCTTTTGTCATATATGACAACAATTGATTAACAATATAAGTCATATATGATATAATAATTATGACAATCGATCCGATTGCCCATGTAGTAACGATCCCAGATGAAACGGGTGTTGACCAATTAGGCACATTCCTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //