Array 1 178500-181409 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGFOT010000005.1 Acinetobacter haemolyticus strain AC1502 AC1502_contig_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 178500 30 96.7 30 ............................G. TTTGGTTTTGATGCCGAAGTTTTATTTCCT 178560 30 93.3 30 ............................TC TGTACTACTTCGTTGCTTGTGGGTACTTCT 178620 30 100.0 30 .............................. ACAAACAGCAATCAAGAAAATAGATTGCAA 178680 30 96.7 30 ............................G. TCTGGAAAAAGAAGAACCGGTAAACAATGC 178740 30 100.0 30 .............................. TCAAGCCTGATTCAGTGTTAATGGGTATAA 178800 30 100.0 30 .............................. GCAAACGCTATTAAGAAAAGAGCTCCTATA 178860 30 93.3 30 ............................TG ATACTTTATGCCCTGCTGAAAACGGCTATG 178920 30 93.3 30 ............................TT CAACACTGAAACCATGGCTTTACGTGTGCA 178980 30 93.3 30 ............................TG TGCCATTAACAAAAAAACCTGTCTCATTTT 179040 30 93.3 30 ............................TT TGTCCAATCGAACCAATCTTTAACTGTTTG 179100 30 96.7 30 .............................T CGGGGCGTAATCATAATTTCAACGTCAAAT 179160 30 93.3 30 ............................GC TGATACGTTTAATAAAGCCTTGATAAAAGT 179220 30 93.3 30 ............................GG TGCAGAAAGCCACTTGACCAATGGATGTAT 179280 30 96.7 30 .............................C AAATGGCCACACGTCTAATGTCGCTGACAG 179340 30 93.3 30 ............................TT TCAAGTGACGAATATTTTCACCCTGCTTGT 179400 30 96.7 30 .............................C CTTAAAAAAAGTGGCATCAGCAATGGCTGC 179460 30 93.3 30 ............................TT TCAAGTGACGAATATTTTCACCCTGCTTGT 179520 30 96.7 30 ............................G. TAAATGAAGCTAGTCTTTTACTTCTTCCAG 179580 30 96.7 30 .............................G ATTGCAAGATCAGCGTTGCAACAGCGGGTA 179640 30 96.7 30 .............................T CCCCATAAGCACTTTCCAGAGTTGAAGTAA 179700 30 96.7 30 .............................C AAAATAGCAGCGGACTAAGCGGTGTTGCTA 179760 30 93.3 30 ............................TT TTACGATTGGATTTGCAACTGTATTGGCGT 179820 30 100.0 30 .............................. GAATAGCGATACCAATCGCAATACCAAATG 179880 30 93.3 30 ............................TC TTTGTACTGCTTAGCAATCTCGGCATTAGG 179940 30 100.0 30 .............................. TGCCAACACATACAGGTAAACCGAGCCACT 180000 30 96.7 30 .............................G CTAAAAAATCACCAATTTCATTTGGTGGCA 180060 30 93.3 30 ............................TC ACAATCGTAGAGCCACATGTAGCCTTGCAT 180120 30 96.7 30 .............................T ACTCGCGCGCCCGACAAGTGTTTTTTATTT 180180 30 93.3 30 ............................TT GACCTGTTGGTTGACCTGTTTCAGGGTCTA 180240 30 93.3 30 ............................TC TGTGACGATGTTCATCTAATTCTGAAATAA 180300 30 96.7 30 .............................T CGACAGATGATTACATGATTATTCGACGCT 180360 30 100.0 30 .............................. TCCAAGCCACAGCTAATGCAGCGAGATCTG 180420 30 96.7 30 ............................G. CCAAACAACCATGGAACGCTCTAACGATAC 180480 30 96.7 30 .............................T GACGAACTGATCCGCATCAAGCAAAGCAAT 180540 30 93.3 30 ............................GC CCCAATTAATACCGCCAGAAGTTGCTACCC 180600 30 93.3 30 ............................TG ATCAAGTTTCTAAGTGAACTGGGTGCAGAG 180660 30 100.0 30 .............................. ATAAACCAATAATGCTAATTTCATTTTCCG 180720 30 96.7 30 .............................G TCAATGTGTATTCCTGAACACCAGCAACAA 180780 30 93.3 30 ............................TG AATGTGCCTTCTGGTACCAGAGGATTATTA 180840 30 96.7 30 .............................C TAAGGCAACTGGACTAAGATCAGGAAATTG 180900 30 100.0 30 .............................. GCGCTTGTAGCAACGCATCAATCACCCGAT 180960 30 93.3 30 ............................TG CATCAATAAGATCAGCCATATAACGAGAAT 181020 30 96.7 30 ............................T. TTGATGAAATAACTAGAAAACAAATATCAG 181080 30 96.7 30 .............................G TCTCATCAAAAGCAATACCAAGACCGCGAA 181140 30 96.7 30 ............................T. TTTCAATTAACTGATGCAATATTTCACTGT 181200 30 96.7 30 ............................C. TAGGTCTTTTAAAAAAGTAGGATTTTCACG 181260 30 93.3 30 ............................TT GGCAAATGGTGGTGAAGTCACCCTTGTTGG 181320 30 96.7 30 .............................T CAAAAGCCGTGGGTGATTTGTTCATATCCT 181380 30 86.7 0 ........................A.T.GT | ========== ====== ====== ====== ============================== ============================== ================== 49 30 95.7 30 GTTCATGGCGGCATACGCCATTTAGAAAAA # Left flank : GTCAGTGGCTAGAACGATTGATGGATTATGTGCACATCATTCAGCCGCGTGAAGTGCCGCAAGCCAAGGTTACTGGTCATGCACACTATTATCGAGTCAATCCGAAGATGAGTATAGAGGAACGCATTGCTCATCAAGCACAGCGTCATAATATTCCTTTGGCTGAAGCTAAGCAGCATTTTAAACAATATGTTGAACAACCTGTGGTTGAGCCTTATGTTAGTTTAAAAAGTCTTAGTGCTAAACGTGAGGAAAATATAGATCGACCGTATCGCTTATATATTGGTAAGTCTGTTGCTGATGAGGCGAAAGATGGGAAATTTGGAACGTATGGGCTAAGTCGAATGGCAACAGTTCCAGAATTTTGACCCAATATTTTTTTTATTCTTTAACAGCTTAATAAAATCAATAAGTTACAATAAGTCGTTTTTTGATTGGGTAAATTGCTAAAACCTATGATAAGTACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TGTAAATGGCTATTCCTAATACATTCAGGCACTTTAATTTTTAAATAAGAAAATATACCCTGAACCTAATATATTTTTAGTGAATTTTTCATGCGCGGTCTTTATCTCATCACCAATGATGATCCCATCCAATTATTACTTGAAAAATTAGAAGTTGCTTTAGCGACGAGAAAGGTTGCGATTTTGCAATATCGCCGTAAGAAAGTGGCAAAGGCAGATCAACCACGTGAAGTTGAACAGATCAAAACATTGTGTGAAAAGTACCAAGTACCATTTGTGATTAATGATGATTTGGCTTTAGCTGAACAATTTGGATTAGGTGTCCATTTGGGGCAGTCTGATGGGGAAATAAGCGATGCCGCTGCACGGTTACCGCAAGGTACGATTATTGGTCGTACATGCTTAAACTCGTTAGAGCTGGCTGAAAAAGCAATTGCTGATGGGGCGACTTATGTGGCTTTTGGTGCAGTCTATGCCACCTCAACTAAACCAGAAGCAGG # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.20, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 45056-48203 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGFOT010000016.1 Acinetobacter haemolyticus strain AC1502 AC1502_contig_16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 45056 28 100.0 32 ............................ GTAAGCAGCAAGGGATGGACGGTATTCAATCC 45116 28 100.0 32 ............................ AATCAAGCCTGATTCAGTGTTAATGGGTATAA 45176 28 100.0 32 ............................ ACGGAGCGCTTAAACGCGCTCTCTTAGTTCTT 45236 28 100.0 32 ............................ ATGCCACGGGTAGAAATTGAATTTATAATCTT 45296 28 100.0 32 ............................ AAAAGTGTTTTTTGCATTCACCCTTGGGTAAT 45356 28 100.0 32 ............................ AGAATGTGATAGCCCTTTTGAGCAATGCCCTG 45416 28 100.0 32 ............................ TGACGAGTATTACCGAGCAATCAAATACGCTT 45476 28 100.0 32 ............................ GCTGCAAAATTTAGTGAGTTCCACTTAATCAA 45536 28 100.0 32 ............................ TGCCATCGTGCTTCGCAAGCTGCCTTGGTTTG 45596 28 100.0 32 ............................ ACCTTCGGTGGCAACAATCGTTGTGCAGAAGT 45656 28 100.0 32 ............................ ATTTGATCAGTTAAGACGATGCGTTCAGGTTT 45716 28 100.0 32 ............................ GCAATGTCCTGCACCTACATTTCAAACCATCA 45776 28 100.0 32 ............................ TACAACTGCAATAATAACGAGTAGCCAGTTAA 45836 28 100.0 32 ............................ ATGTTTTGCGCATCAATCCCAATCTGACCGTC 45896 28 100.0 32 ............................ GCTGTAAGACTCGCATTCGATCAATTAATTAA 45956 28 100.0 32 ............................ ATGAGTTTGCAGCTAAAACCAAGCTACTGGAT 46016 28 100.0 32 ............................ AGCTGCTGGTTTTAATAGTCATCCAGCTTCAA 46076 28 100.0 32 ............................ ACCAGCAAATCCCAATGCGCCAGTAGTTGCAC 46136 28 100.0 32 ............................ TGGAGGGGGCATATCCAAAGAACGCCCTTGCA 46196 28 100.0 32 ............................ ACCTGAAGACTGGACAGAAGATAAATGGCCAA 46256 28 100.0 32 ............................ TGGTGGTACGACTGGCCAAGTACTTAAAAAAG 46316 28 100.0 32 ............................ TGTAAGCGATTAAGAGCAGATGAGTCACTATG 46376 28 100.0 32 ............................ TGAACACTATATGCAATGCATGGGGGGATTAT 46436 28 100.0 32 ............................ TGTTTTTACAAACATTAAAGGGATAAACGAAG 46496 28 100.0 32 ............................ ACTTAGAGATAGCGAGATAGTACATATTCTTA 46556 28 100.0 32 ............................ AGTCGGAACCCAAGCTGGAGCAGGTGAAGCTG 46616 28 100.0 32 ............................ TATTCCTGCATTCATAATGTGATGCATGCGAT 46676 28 100.0 32 ............................ ATCAAGCATTGACTCTAAGTATTCATAAATGT 46736 28 100.0 32 ............................ ATGCCACGCATACGCAACTGATCAATGAATTT 46796 28 100.0 32 ............................ TGTAGCTGATGCATTTTGTAAGATTGCATTCT 46856 28 100.0 32 ............................ ATTGGTTCAGTTGATGCAGCACTTGCCTTTTC 46916 28 100.0 32 ............................ AGCAAAAATCCTGCAAGGTCATAACGTTTATG 46976 28 100.0 32 ............................ ATACTTGTGTAAGAAGTAGGCAGTTTTTCATA 47036 28 100.0 32 ............................ TCATTAATGAGTCCTCCAGTAGACCATTTGAT 47096 28 100.0 32 ............................ ATCATTACCCCAAGAAATGAAATTCTCGTATT 47156 28 100.0 32 ............................ ATCACTGCCACCAGTGCCGTTGCCGATGTTTT 47216 28 100.0 32 ............................ AAGATCGCTCATAGCCATCGTTACACTTTTGA 47276 28 100.0 32 ............................ ATTTGAACAACGCATCTTTAAGCACTATAAAT 47336 28 100.0 32 ............................ GGCAGTCGGTTCTGAATGCCATCGATCGAATT 47396 28 100.0 32 ............................ ATTCAAAAAAATCACAAACAGCAGTAGCCCAA 47456 28 100.0 32 ............................ GTACAGCGACTTGATTCGAGGATATATTCATC 47516 28 100.0 32 ............................ TACTGCAGGCGGTGCAACTGCAAGAATCAAAG 47576 28 100.0 32 ............................ AAACTGATCAACTTTGTGTCCAGTAACTTTTA 47636 28 100.0 32 ............................ CTAAACGTCTATTCTTTTTTTCTATTTTTGCT 47696 28 100.0 32 ............................ TGCACCACCACAGGAGCACAGCCATGACTAAC 47756 28 100.0 32 ............................ AGATAGATCACTAAACTTTTCATTACCAAACA 47816 28 100.0 32 ............................ ATAAACATTGTGCCCTTGAAGAATCTTTGCAG 47876 28 100.0 32 ............................ AGATAGATCACTAAACTTTTCATTACCAAACA 47936 28 100.0 32 ............................ ATAAACATTGTGCCCTTGAAGAATCTTTGCAG 47996 28 100.0 32 ............................ ACACTGCAAAAGATCAGAAATATACTTAAAGT 48056 28 100.0 32 ............................ ATCTTCAATCCAACGCTTACATGTTTCTTGAC 48116 28 100.0 32 ............................ TAGAAAATACCGCACGTCTGTGCGGCTAAAGC 48176 28 89.3 0 ......................C.T..T | ========== ====== ====== ====== ============================ ================================ ================== 53 28 99.8 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GGTAAATGCGATTTGTCTTTGTAGATTACTCATCTCAATTGTATCTGCATCCACGATCGTTATTTTGCCTACGCCTGCGCGAGCAAGTAACTCTGCACTCGTACAGCCGATCCCTCCAGCACCAACAATCAGTACATTTGCCAATTTTAATTTTTCTTGTGCTTCAATATCCCAACCATCTAATAAAATCTGACGACTGTATAAATGCATTTCGTCATCAGTTAATTCAAAAGTATGTTCTAGATGATCAGACACGTTCCATGATCTCAAAATCGGCTTAACGAATGCTGATTTTAAGTGGCTAATCTCATTTAGCAAAGCATTTAATGCTTGCTGCATCATTTATTTTGACAAATCAACGGATTTACCCCAATATTTTTATTACTCTTTAACAGTTTAATAAAATCAATATGTTATGAATTAGCATAAAAACTTTGGGTATTGATGTATTTTTCACCACAAGTTAATGTTTTTTCTTAATTTATTTATGCTATTTTATA # Right flank : TACAATCAAAAACAACCCACAGTACCTAGTGAAATTACTGACTTATATCGCTTTTAAATAAACAATTTGTTAAATTATATAAATAGAATATAAGAGATTTATCATGGAAAAAACTCTATTAAAGTTCATCTGTCTTATAACATTGTTAGTTTCAACAAATCCAAATATATATGCAAATGTTTACATACCAATTCCCTCATTAAAAAAGCCTAAAATATCTCCGCATATTAAAGCTCAAGCACTCAAAACGGATGAGTTTGATGTATCTACCAAACAATTATTAGAAAAAGGCTATATTCCTATTAAATCCCAAACATTTAATGGTAGAGATGATTTTAGAGGTTATGAGCACGTTGTAGCAGCGCTAGAAAAAAGAGCTGATCAAATGGGAGCTCAAATTGTACTATTTACTAATGAGAAGCCAACAGGAAGTGTAGATTATTATAGTTTCACCACTCCCTTTCCTCAAAAATCAACAATACAATCTAACTTTGATAATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //