Array 1 50805-49730 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACLYX010000003.1 Limosilactobacillus ingluviei strain An777 An777_contig-115_2, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                   	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	==================================	=====================================	==================
     50804	    34	 100.0	    36	..................................	GACTTATTGGATCCTTGAAAACGCGGAGCTTTCCGG 	
     50734	    34	 100.0	    35	..................................	CAGCACTTGCGTTAAGGCTTGTGACTGCTGACCAA  	
     50665	    34	 100.0	    37	..................................	AACGGCCTTTACGACAGCCAAGTAGAGCTTATTCCGC	
     50594	    34	 100.0	    35	..................................	GCCTTCCGATAACGTTCACGGGCCAAGGCAATTTC  	
     50525	    34	 100.0	    34	..................................	GGTCCACGGTTGGTGGCTTTTTTGCTGGTTTGTG   	
     50457	    34	 100.0	    36	..................................	ACGTGGCCAGAATGTCTAATTAACCACAAAACAACT 	
     50387	    34	 100.0	    36	..................................	CGGGCGGGTGTGCAATTTATTAAGAGTGTGGTCCAC 	
     50317	    34	 100.0	    36	..................................	TGGAAAATTGCATCGAAAAAATCAAAGATGTAGACG 	
     50247	    34	 100.0	    34	..................................	ATTATTGGGCGAGTCGAAATTTTTTGGTTTTAGA   	
     50179	    34	 100.0	    36	..................................	ATCCCATACAGCGAGGCGACATATTGGATCACTGGC 	
     50109	    34	 100.0	    34	..................................	TGGTTAGCTCTAATCGCTTACGAGTTGTTTGGAT   	
     50041	    34	 100.0	    34	..................................	TTCTCGATCTTGATAATGTCATCAACGGTGACAA   	
     49973	    34	 100.0	    36	..................................	GAACTAACCCAAGAAGATTGGATTGGCTACGACCTT 	
     49903	    34	 100.0	    36	..................................	GTCACGCCAGTTGACACCGATAGTAATAAAGCCCGC 	
     49833	    34	 100.0	    35	..................................	TTGTGTACATCAATTCTCGCGGCTCGTAACCGCGT  	
     49764	    33	  88.2	     0	..............C..G.-..........G...	|                                    	TA [49740]
==========	======	======	======	==================================	=====================================	==================
        16	    34	  99.3	    35	GTCGCACTCTGTAATGGAGTGCGTGGATTGAAAT	                                     	       

# Left flank :   AGGAAATATGATTTACCGGGTCTCCGGGAAAACCAATTTGGCGGACTTCGAGCGTTACTTTGATGTTGATATTCCGCAATTTGAAGATTTGGATGTGGCAACTTTAAACGGTTTCTTCCTAGAAGAAGAATATAGTTTGAAGTTAAATCATCCCTTACGGGTTGGAAACTTCTCATTTATCCCGGTTGAAATGGAAAACTCGAATGTCAAGGAGTTCCGGGTTACGCAAATTAAACCAAAGAAAAAGGTTAAGGACGAAGAAGCTGTTGATCAAACTGAGAAAAAATAATAGTGTGATCGAAGTGAGGGAAGGTAGGCATAGTACCACCTTCCTTTTTTAGTAAAGACATTGGTGCGAACCTAAAGTAAACATACTTTTCCCGGTAGGTTCGCACCAACAAAAGCTATAAATCGTCTTACAATAAGTCATTGAACTTGAATTGCGCAAAAATTTTTAGCCGCAACTAGTAATATAGCAGAATAAACCACTATATGTTGCG
# Right flank :  GGTTTTTGGTGAAATATTGCCAGCCGGATGTTATAAAACTTTTAGCTTGGAATAGTATGATAACGTTCAGAAAAGTAATACTAAAAGCCGCTAGAAATCAACGTTTAAAGCGTGATTCTAGCGGCTTTGTTTTTCAACTCCTTAGTCACTAAGAAGCCCTTGCGCTTTTAGGGTAAGTCGTTGGCGTTGGTAGTAATTTAACGCGGCCGGATCTAACCGCAAATAATCTGCTAAGGCTTGTGGTGATAGTTCCGGGTGTTGCGCCAAGGTATAGAAGACAAAGCTTTGGTAAAGAAAACGGGGAGCTAAACGCATGCCAAGGTATTCTTCGGCCGGTTTTAAAAATTTATGCAACCCCGCGTTGCTAAGGTGGGGTTGAGCTTGATTAACCCGCAGTTTTAGAAAGGGATCAGGGCAGGCTTGGAGTTGAGCTAGTGGAGTGTGAAAATTCCTAAACTGATCCAGAAAGCATTGTTCAGCGTTTGAACGCGGCTTTAAGT

# Questionable array : NO	 Score: 9.22
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACTCTGTAATGGAGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:52.94%AT]
# 	Reference repeat match prediction:         R [matched GTCTCACTCTGTTATGGAGTGAGTGGATTGAAAT with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-1.80,-3.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [6-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,9.78   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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