Array 1 2099159-2102049 **** Predicted by CRISPRDetect 2.4 *** >NZ_FSRB01000002.1 Singulisphaera sp. GP187, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 2099159 37 100.0 36 ..................................... CCCGCCGTCCACCTCTCCCTAGCCCCTCCACGCCGT 2099232 37 100.0 37 ..................................... AATCTCCCCTTTGGCCTCATGAACAGTCTTGTCCATC 2099306 37 100.0 34 ..................................... TTCCGCTTCGCCACCGCCCGCGCCGCGTCCTCGC 2099377 37 100.0 37 ..................................... CGTAACGCGGACAGTTCTTCCGTCGTCACTTCGATTC 2099451 37 100.0 38 ..................................... CGCAGCTTCCTCGCTCTGGCCAGTCCATGTAAAAACTT 2099526 37 100.0 36 ..................................... ACCGCGGTCGATGTCCGGGTGATGCTTGCGGAGTGG 2099599 37 100.0 37 ..................................... GCGGCCTCGTTAGCGAGGATCCGATCGACGATCATCC 2099673 37 100.0 35 ..................................... GTCTTCGCCGGTGATCGGATTCATGTACATGCCGA 2099745 37 100.0 36 ..................................... CATGCCCGCGCGATGGCGAACCTGCCTGCTGAGAAC 2099818 37 100.0 34 ..................................... GGCATTACCCTCCCCTCGAATCTGCGCGATCGTC 2099889 37 100.0 35 ..................................... GCCATGTGCGACGTTCGACCAGAACTCGGCATTGA 2099961 37 100.0 34 ..................................... GCGTTGACACGGAAAAACAAGCTTCGCCGGCACA 2100032 37 100.0 39 ..................................... GCCACGGCCGGACCGATCGCCGATTGGGTGAGTCATCTC 2100108 37 100.0 38 ..................................... GGGCCGAAGTGTAACCAGAGCCACCGTTGGTGACCGTC 2100183 37 100.0 37 ..................................... AGGGCCGCCTCAAGTTCGGGCGTTAACTCGCCATCGG 2100257 37 100.0 37 ..................................... AACGACTTGATTTCGACGGTGGACTTGTCGCCGGACT 2100331 37 100.0 36 ..................................... GCCTCTTGCCGCTCGAAGCACTCGCCCGCGATCCAG 2100404 37 100.0 38 ..................................... CTCAAAAATAAAATCATGGTTGCCTGCGACCGAAACGA 2100479 37 100.0 37 ..................................... GTAGCCATCCTCATCAGCGACGTTCCACGTCTTCTTG 2100553 37 100.0 37 ..................................... GATTTCCAGGGGGTTTTGCAGTCCGTCAATCCTTCGG 2100627 37 100.0 34 ..................................... GCGAATGCCAATGCGATCTGGGACAACGGTTCGC 2100698 37 100.0 36 ..................................... TCGGCGTGAACGATGCGGCTCTTGGCGGCCTCGGCG 2100771 37 100.0 38 ..................................... TCCACATAGGCGGCCACGACGTAGCGATCGTTGCCGAA 2100846 37 100.0 34 ..................................... GTCATGCCGCCGCTCCCGGTGGAGCCGGCGGGCA 2100917 37 100.0 38 ..................................... ATTGACGGCAAAGAGAAGCCCTATGGAGAGATCGGTGA 2100992 37 100.0 36 ..................................... TGTGCAAGTCTCAAGATACGTGATTGGCTGTTTGCC 2101065 37 100.0 36 ..................................... TCGCAGTGCGGCACATGAACGCCGTCGCGAATGAGA 2101138 37 100.0 37 ..................................... TCGAGCCACCGCCTCATGCGAGTGACGCTGATTGAAC 2101212 37 100.0 36 ..................................... ATCTCTACCGATCAACCGGACATGCTCGCGTCTGAC 2101285 37 100.0 36 ..................................... CTGTGCCCTCCCGGCGCGAACCTACCAGCCGATCGC 2101358 37 100.0 36 ..................................... CTTGCCTTCTGGCAGCCTGAACCTGACCCTGAACCG 2101431 37 100.0 36 ..................................... ATATCCTCCGGAGGGACAGCAGCCCCAACGGCAGCC 2101504 37 100.0 35 ..................................... CTTACCTGGGACGGTTCGCCCCTGGCATACTCGAC 2101576 37 97.3 36 ......................C.............. TTTCATTTGTGCGGTATTGCGGGATTGCATTCCGCA 2101649 37 100.0 36 ..................................... CGATCGGTTGAGGCGAGACTGGTGCGTGAGGGGGAT 2101722 37 100.0 35 ..................................... TAGAGGCGGGCCTTACGGTTGGTCTCTTCGGCGGA 2101794 37 100.0 36 ..................................... TTGGCTTCCTTGCCGAACCCGACGACATTGAGCAAG 2101867 37 94.6 36 .........T..........T................ TCCACCGACCAGATCTTCTTCTTCCAGGACGAACTG 2101940 37 94.6 36 ..T............T..................... TCGATCCCCACCCGCTTCCCTGCCTCCTTGACGCGT 2102013 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== ======================================= ================== 40 37 99.6 36 GTCATCCACGGCTTCCGAGCCGTGGCCCCATTGAAGC # Left flank : GGCGGCGAAGCCATTCTTAGGCCACGATCGCCGCCTGTTTCATCCCGACCCTTCTCCATCGTGCTCCAGGTCTCCGCCCGATCGAAATCCAACGAGCATCCGGCCGGACTCCCCACCGCCTCTGGCGATTCCCCCCCGAATTCGGACTGGCCAGCCCTTCCCGCCCCTCGCCACGCGACCCGCCGCTTGTTCGCTGGTAACCGGATGATTTGGGCGTCCCGAGCGAGTAACCTCCTTCGTAGGCTTCGGTGCCTGACCACCCGCGAGCACGAGGATCGTGAAATCCGCGCCGGCTCCGGGATCGTCTTCAAGCTCTTTGACAATAAGGATTTAAGCGTGAAAATGCCGCCCTAGCCCCTCTCGCAAACGATAAGTCGTTTCACCTCATGCCTTTCGGGCAACAAGGCTCGCCCTCGTGTGCGAGCGAGCAACCCAAGAAGAGTCACCTCTCGCAAGATCCCCACTAACTCGCTACACTACGAGAGGTTAGGTCCCCGGCC # Right flank : TGCGCGGTCGAACAAGGACTGTACGCCTTCGCTGATCGGAAGAGAATGACTCGTCCCAGGTATCAGGACAAATGACTTGCGAGTTTGTGACGGAGATCTGACGCATCCTGCGATGTATGAGTGGGGGGAATGCTTAGGCATGATGCCGACTGGGGTCGATTTATGGATTGACCTGAGCGACGATTGATCGACGAAGATCTACATCAATGAAGGGGGCGAGTGATGAGCTTCTTGGGGCGTCGGATTCAGATCGGGGACGAGGACCGGTCTCGGGTCGCCGAGCGATCGGGGAAACGGGGCTTGAAGCCCTGGGGCGAGGTTTTGGAAGGTCGCCTGCTGCTGTCGGCGGACGGAGGAGCGATCAAGGCGCGCGGCGGCTTCCAGATCTTGGAATTCCAGGGGGTACCGTTCGGTCATGACGTCGGTACGGGATTCTCCGGTGAGACGCTGGCCGACTTCTCCAAGTGGCCCCAGAGTACGGCAGGCGACTTCAATGTCAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATCCACGGCTTCCGAGCCGTGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCATCCACGGCTTCCGAGCCGTGGCCCCATTGAAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-13.90,-14.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 6179853-6185282 **** Predicted by CRISPRDetect 2.4 *** >NZ_FSRB01000001.1 Singulisphaera sp. GP187, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 6179853 37 100.0 33 ..................................... TCCACAGCAATTCCACAACACCAGCGGCTTTGC 6179923 37 100.0 34 ..................................... AGCATCTCGGTGTCGGCGACACGGGGACGATTGA 6179994 37 100.0 36 ..................................... TCTTCAGAGAGTTTCCTGATCCTCGCGGCCCCCTGG 6180067 37 100.0 34 ..................................... GGAACAACTGTCTGGTGCTCTTGCCTCGGTTTGT 6180138 37 100.0 35 ..................................... AAAGAGAAGCCGACCGAGCAGGCGAAGCTCCTCAG 6180210 37 100.0 36 ..................................... CCGCCACCATCCCGACCGTCGCCCCGTCACCGCGGG 6180283 37 100.0 34 ..................................... GATTCACCGCGCGGATCCGCCGCTCCGATTGGCC 6180354 37 100.0 35 ..................................... GCGCCGACCAAGGCGCCCTCGTCATAAGCCATGAC 6180426 37 100.0 36 ..................................... TTCGTCAATTCGCGAAACCACTCCCGGTCGTGCGGG 6180499 37 100.0 35 ..................................... TTGTCGGTGCCGATCTCTACACCTCGCGGGATCGC 6180571 37 100.0 34 ..................................... AGGGTATTCGTGGGGGTCAGTCGAGCCGTACATC 6180642 37 100.0 35 ..................................... ATCGTAATGACTGTCCAGCACAAGGTGGCCGAGGG 6180714 37 100.0 34 ..................................... AAGCTCAAGGACGCCGAAACCGCCCTGGTCAACG 6180785 37 97.3 35 ..............A...................... CGTCTTCCTGCCTCGCGATCTGGCTTCGGAAACGC 6180857 37 100.0 35 ..................................... AGCCCCTCTTTTTCCGCGCAGGCAAACAGTCCGAA 6180929 37 100.0 34 ..................................... ACTCTTGATCACTTCTCTGCAAACCGCGACCGAC 6181000 37 100.0 34 ..................................... ATATCAATATGTGGGTTCGTGACTGACGATAATG 6181071 37 100.0 34 ..................................... TCAATGGCTGTTTGTGCTTCCGGTGGCACTTCGT 6181142 37 100.0 34 ..................................... CGCTGAGCGTGACGACCTCGGCCCAGTAGGTGCC 6181213 37 100.0 34 ..................................... AGCCAATTCCGGACGATGAATCAGATCACCCAGA 6181284 37 100.0 35 ..................................... ACGCAAGAGCGCGGTCATGTCGTGCTGTGTGAACA 6181356 37 100.0 36 ..................................... ACCGTCGTCGCCTCGGCCTCGGCCAAAGCATGATGG 6181429 37 100.0 34 ..................................... TTCCACTCATTCCCAATCATAACGAATCGGCTGT 6181500 37 100.0 33 ..................................... AACTTTAGTATTGATGAGACCGGGGAGTTCTTC 6181570 37 100.0 36 ..................................... TATATATAAGGAAGTGAGGGGCTGATGGGAAAAGGC 6181643 37 100.0 34 ..................................... GTCTTCCGGAAGGTTCGTCGAGTACTCCGTGCCG 6181714 37 100.0 34 ..................................... ATCTATGGGGCAATCAACAAGCTGAAGCGGGACC 6181785 37 100.0 34 ..................................... AAAAATCTCGATCGACCGGCGCTCCGGGAAGCCC 6181856 37 100.0 34 ..................................... GGATCATCCGGGCGTTGATACTGACTGACTCAGG 6181927 37 100.0 35 ..................................... CTTCTGATGGTCGCATTCCTGACTACCCGCTCGGC 6181999 37 100.0 35 ..................................... TACTTCGTCGCCCTCCGCGTTCTCAACCACGCGGC 6182071 37 100.0 34 ..................................... AAGAAAGGGTTCGCGTTCGAGTCGAATCCCTGGA 6182142 37 100.0 34 ..................................... TTCCTGGCAAAGCACTACGGGGGAGTCGTTGGCC 6182213 37 100.0 37 ..................................... TTCTTCCAGACTCTCGTCACCGCGACCACCGAAGCGT 6182287 37 100.0 35 ..................................... CGCGAAAGCGTGTCGTACCTGTTCAACGACCCGGT 6182359 37 100.0 34 ..................................... TCCTGCCTGACGGCCGTCGCGTCAAGCGTTACCT 6182430 37 100.0 35 ..................................... AAGCTGCTTTCCCACCTGCAGGTCCCCGAGCGTCC 6182502 37 100.0 36 ..................................... CGGAATTCGTCGTGGACGCGATGAAGTGCCTTGGCG 6182575 37 100.0 36 ..................................... GTCATCAAGCACAAGGTTGCCGATCGCGACAAGCGG 6182648 37 100.0 33 ..................................... TTCCTCTACGAAGGCACCGAGGTCGCCATCGAG 6182718 37 100.0 33 ..................................... TCAACCCTTACTCGCTGGACCCACTCGCTCGAC 6182788 37 100.0 35 ..................................... ACCTCTTGATCGAGCGACCGGAGTTCGGCAGCGTC 6182860 37 100.0 36 ..................................... GTCCATCTGACTCACTCGATCGACGGTGACTCGAAC 6182933 37 100.0 35 ..................................... CATCGCAACGGTTGCGGAACTCGCTGGGCACGCTG 6183005 37 100.0 36 ..................................... CCGCGCGGCCTGCCGCTGGATCTTGGCCGATCACCG 6183078 37 100.0 35 ..................................... GCATCGGTCGGCGCTGGGATGAAGCCCATCCGGTA 6183150 37 100.0 35 ..................................... TCGCTGTTCTGCCAGATGAAGGTGGACGGCATGGG 6183222 37 100.0 35 ..................................... GAACGTCATGCCGTAAATTTGGCCCCCATGCGGGA 6183294 37 100.0 34 ..................................... GTGCGGAGTCGGACGAGTTCGTTCATGATGCCTT 6183365 37 100.0 33 ..................................... TGGGCGTCCTCGAGCTTCGACTCGACCGTCGGC 6183435 37 100.0 35 ..................................... TGTTTGCTTCGGATCCGATGGCGATCGGTGATCCC 6183507 37 100.0 33 ..................................... CGCGATCTTGTAGGTGCGTCCCGTTTCGAGATT 6183577 37 100.0 35 ..................................... ACTGGCGATATCAGCAAGCTCGCGGCCTCTCCGGA 6183649 37 100.0 38 ..................................... AGTCCTACCTCTATCCTAACGGTTCCGTGGTCGTCTGC 6183724 37 100.0 35 ..................................... GTTTGTCGCGGTGGCCGAGACCGGCAGACCTCCAC 6183796 37 100.0 35 ..................................... AATACGTTCTCAAGCATGATCCAAGACCAAATCTC 6183868 37 100.0 36 ..................................... GGGCACAATCCCCGCCACCAAAACCCTGGCCCAAGC 6183941 37 100.0 37 ..................................... CAGAAGCAAACAGTCACGCTCGAGGACGTCGTCGCGC 6184015 37 100.0 34 ..................................... AAATGTACTGCAATGGCGTTCAGATCGTTAACTG 6184086 37 100.0 33 ..................................... TGCCCAAAACCAGGCAGGAATAGCAGTGATCGA 6184156 37 100.0 33 ..................................... TGCCCAAAACCAGGCAGGAATAGCAGTGATCGA 6184226 37 100.0 35 ..................................... ATCACGCAAGTCACCGCGTTAACCTTGTCCGTTCC 6184298 37 100.0 35 ..................................... GCAACGAAGACGAGGTGGCCTTCGGCGAGGGCTCG 6184370 37 100.0 36 ..................................... GAATTTTTTTGCGGCGAGAATACCCCCGATGTCGCT 6184443 37 97.3 35 ............................C........ TTGACCCACGGCGTACCCAAGAGGATCGGTCGCTC 6184515 37 100.0 36 ..................................... AAGCCCGCGCAAGGCTTGTACATCCCCTGGAACCTC 6184588 37 100.0 35 ..................................... AGGTCAACAACGGCCAGCTCACCCCCGACATCGTC 6184660 37 100.0 36 ..................................... CCTCCCTGATCGTGTGTGGCGACCTGGCGAAAGCGC 6184733 37 100.0 35 ..................................... AAAATCTGGCGGCCAGAGCTGCGCGACTCCGGGAG 6184805 37 100.0 35 ..................................... AGCCGTGCAACATCATGGCGGAACCGGCCACGAGG 6184877 37 97.3 34 ..........A.......................... TTGCGACGAATGGATCGGTTCGGGCAGACAAAAA 6184948 37 97.3 36 ........T............................ ACCAGACTAGGTACGCCGCCGTTCCGGAGGATGGAA 6185021 37 97.3 35 ......................A.............. GGGTCACTGCCAAGATCCTCGGCAACCGCCGTCGT 6185093 35 94.6 35 ....-......-......................... TGCATCGGAGGGAGGCCGTCCGACTGGCAGAGAAG 6185163 37 94.6 46 ..............T..C................... GATTGAAACAAGGAAGTCGGGTGCGATGCCAAGTGCGTGTGGACCG 6185246 37 75.7 0 .............CT..C........A..GAG..TC. | ========== ====== ====== ====== ===================================== ============================================== ================== 76 37 99.4 35 GTCTCCCCCGGCCTCCGGGCCGGGGGCGGATTGAAAC # Left flank : GCAAAAACTACGGTCAGCGCGTCCAGCAGTCGGTCTTTGAGTGTGTCGTGGGTCCGCAAGAGTGGGTCTTGCTCCGCGAAGCTCTGCTATCTCTCATCGACACCCAGCACGACAGCCTGCGCTTCTATCCACTCGACGAGACCGTTCGCAAGCGTATTGAGCATTACGGAACCAAAGAACCACTCGACTTTGAAGGCCCGTTGATCGTCTGACGCGTTGTCGTCGACATTCGGACTTTCGGCCCCCCCCTTCCGAATCGCTCTTTGACAATTCGGTTCTTCTCCGTTCTTATTGAAGCACTCTAACCGAATGATTTTGCTCTCCGCGAACCCATCGCTCCGGCTCAAGCCCCGGGGTTTCGCGATCGTCGAAAGGAGCTGCCCCCTTAATGACTTCCGGCGAGCCTCCCTCTCAAGAACACCGGATTCTGTACCGCTTAAAAAGAGTTTCGCGAATTCCGCGATGCAAACTCCGGCGTCCTTTGAACTTAGGGGCGGGCC # Right flank : CCCAACGACGGATCAGGTGCGCCGTGGGGATTCGGTCAGGGCCGAGACGACATCAAGGCGAAGGCAGACGGTCGCCGTGTTAAAGCTGGCGCATGAAGGCGACCAGGGCTTGCTTTTCCTCCGAGGAAAGCTTGGTTTCCAGGATCAGGTTGAAGCACTCGACCGTGTCTTCGAGCGTGAGCAACCGACCGTCGTGGAAGTAGGGCGGAGACTCTTTAATGCCTCGAAGTGTGAACGTCTTGATCGGTCCCTGGGAGGTGGCGACCAGGCCGTTGATGGTCTGGGTCTTGTAGAAGCGATCGACCTTCAGGTCGTGCATGAGGTTGTCGGTGTAGTACGGGGCCGGGTGGCAGGAGGCGCAGTCGGCCTTGCCGAAGAAGACGTTTTGACCTTTCATTTCCAGGGAGTCGGGCCCGAACTTCTTGGGGTTGAGCTTGCCGTCGATTCCCAGGCCGGGGGCCGGCGGGAAGTCGAGCAGCTCTTGGAGCTCGGACATGAAG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCCCGGCCTCCGGGCCGGGGGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCCCCGGCCTCCGGGCCGGGGGCGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-21.00,-18.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //