Array 1 1815042-1817055 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065994.1 Streptococcus infantarius strain FDAARGOS_1019 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1815042 36 100.0 30 .................................... ATAATATCACAAAATTTTACGCATTCAACC 1815108 36 100.0 30 .................................... CAATAGTACCGTCTGAAAAGTAGCATTTAA 1815174 36 100.0 30 .................................... ACAATACTGTTAAGACTCTTATCTAAAATA 1815240 36 100.0 30 .................................... ATAATATCACAAAATTTTACGCATTCAACC 1815306 36 100.0 30 .................................... CAATAGTACCGTCTGAAAAGTAGCATTTAA 1815372 36 100.0 30 .................................... ACAATACTGTTAAGACTCTTATCTAAAATA 1815438 36 100.0 30 .................................... CTCAGGATTAATGCTTATTATTGCTAACAT 1815504 36 100.0 30 .................................... TTAACTGACTTCAAACCTCTACACCAAACA 1815570 36 100.0 30 .................................... TTCAATAATCATATTAATGATTTCAACGCT 1815636 36 100.0 30 .................................... ATCATACCATGGTTGCCATTGTCCTTCCAA 1815702 36 100.0 30 .................................... TATTTCCATTTATAACACTTGTGCCAAACT 1815768 36 100.0 30 .................................... TCATGTACTTTGAAACATGTATTATGACGG 1815834 36 100.0 30 .................................... ATTGTGTCGCCAACTTGCACTTGATAGTCC 1815900 36 100.0 30 .................................... TGAGTCACTTGTGGACTCGTACCCATGTCA 1815966 36 100.0 30 .................................... CCTCTAATGGTTTATCAATAACAGATACAG 1816032 36 100.0 30 .................................... TATACAGGTGTTAGCGTGCCTAAATTCGTA 1816098 36 100.0 30 .................................... CAGGGGTCGATAACAACATCACCCTCATCC 1816164 36 100.0 30 .................................... TTGGATTAAACAGATATGACTTTGTGACGT 1816230 36 100.0 30 .................................... CGAAAATTAAACGTTTAGGTTCAAACACAT 1816296 36 100.0 30 .................................... CCAGTGTATAATATTAAAAAAATCCCGATT 1816362 36 100.0 30 .................................... GAAAGTGCTGTTAGCTGAGAAAGCTGAATA 1816428 36 100.0 30 .................................... TAGATTGTTATTTTGAGAATGACGGAAGTT 1816494 36 100.0 29 .................................... AATGTAAAGATAACAAAGGGCTAAGCTGG 1816559 36 100.0 30 .................................... CAAAAATGAACGAACTGGGAACAGAAGTAC 1816625 36 100.0 30 .................................... CCAAACCAGCAACAATGTCTGCAGCAACTT 1816691 36 100.0 30 .................................... TTTGTAACCCCAGTCAATGTTTTTTGAACT 1816757 36 100.0 30 .................................... CTGTTTCTAATTCTTTCATTTTTACCTCTT 1816823 36 100.0 30 .................................... CAATTGATCCTTTAGGCGTTTTAACTTGTG 1816889 36 100.0 30 .................................... TGTTGACTATGTTTCCTCACCTCTTTCTAT 1816955 36 100.0 30 .................................... GCTGATTAATGCATTCAACAAGGCGTTGTC 1817021 34 88.9 0 ....................A..--....C...... | A [1817050] ========== ====== ====== ====== ==================================== ============================== ================== 31 36 99.6 30 GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Left flank : ATGGATGATTACCTTGATTATGCCTCATTTATAAGAATTTGTCAGGTTATCACAAGAATGACTGATGAGTTTCCAAATTTTTATTGTACGATTTTTCCGTCAAACGAAAGCTACTTGTATGTGACTAAAGAGACAATAGAAAATATTACCATTGTTTCAGATTATATTGAATCTTTGTTTGATCTTGATTTTATGTATGAAAGGTTTCTTGGAAGATATCCATCCAACAATGTACCAACAAAAAAAGAATTTTTAATTCTTTTACAGAAGAATGCAAGTTATTTATTTAGTGAGCAAATTTCATATGTGAGTTTAGGAATTTCGGATATGGTAGCTATCAAGATACTAAATAGTTTATATCACTATGATAAGTCAGTTAAATATCCAATTTCAGAGATAAATCAGCTTGAAATAAGCTTTCTTAAGGATAAAGATTGACTTTTAGGCTCAATGAAATTATAATTCTTGTAGAGTATAAAGACCCAAAATGACGATTTGAG # Right flank : CACCAAAACCACCTAGAAATTTCCAGGTGGTTTTTCCTATATGGGTCATAGGTTTGCTAGGTTAGATTGGCCTAGTCGTTCAAGTGGTCTATGGCATACTGAGCTTCTTCGGTGGTGAATTTTGCGCGGTGTTCAGAAGTGAGTTGTTCGTAGATTTCATCTGATGACAAGTCTAGTGTTTTCTTATAACTTTTTGCTTTTTCCAAGACAGCTTTTTTATAGTCTAATTTGGCATGGTCGATAGCGTACTGAGCCTGCTCAGCAGTGAATTTATCGGCATTTTCGTTAGACAATTGGTCGTAGATACCTTGTTTTGACATGTGCATAACCTTATAATAGCTCTTTGCTCTCTTAAGCGCAGCCTTTTTGTAATTAGCTTTCAAATGGTCAACGGCATATTGAGCATCTTCGGCAGAATATTTTTCAACATCTGATGTCAATTGGGCGTAAATGCCTAATTTTGACATGTTCATGAGCTTGTAGTACTTTTCAGCCTTGCT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //