Array 1 8526-10773 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUFF01000044.1 Salinivibrio sp. IB643 scaffold44.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 8526 28 100.0 32 ............................ AAAGCCGTAACGCACACGCACCCAGCCCGCCT 8586 28 100.0 32 ............................ GGTTGAAAAACCCGACAACCTCAAATCAACAC 8646 28 100.0 32 ............................ GTCGGAAAGCCGCCAAACGGTAGCGGTGCGTT 8706 28 100.0 32 ............................ AATAAAGCCGGCCACGTCCATTGCATCGGAGT 8766 28 100.0 32 ............................ CATGCTGCCAAGCAAGCGCGGCAAAACGGCTT 8826 28 100.0 32 ............................ AGCCGAAGCTGCCCCAACCAGCCCACCATAGA 8886 28 100.0 32 ............................ ATGAAAGGATCCGCCGCTTGCCTGGCGGTGCC 8946 28 100.0 32 ............................ TTTTCCGTTGGCTGGGGTGTTGGTTTTAACAG 9006 28 100.0 32 ............................ GAGCACGCGTTAGCATCAACTCATCATTGAGC 9066 28 100.0 32 ............................ TGAAGAAAGTGCGCTTTGCGGACAAATCAGGT 9126 28 100.0 32 ............................ AAAGAGGGACAAGCAGACGATACGCCGATTAG 9186 28 100.0 32 ............................ ACCAACGCCTTCTGCCGTGGATTCGATGAATG 9246 28 100.0 32 ............................ GTTTGATAGTTCTACTCGCGCTGATTTGCCGT 9306 28 100.0 32 ............................ GCAGGCGCGTTCGTGACCAACCCTAAGGCCAC 9366 28 100.0 32 ............................ CCTTTGCGGTATTTCGCTGGCGCCGAGAAATC 9426 28 100.0 32 ............................ ATGTAGTACGCATCGACCTCGGCGAACTCAAA 9486 28 100.0 32 ............................ ATCAAGTAAATTCACAGGCGGGCGCATTGCTC 9546 28 100.0 32 ............................ CGTCCGCAATACCGCCATGCGGTGCAGATGGC 9606 28 100.0 32 ............................ TACAGCCTGCATCAAAACATCGATGGCGAGCT 9666 28 100.0 32 ............................ TTAATGTTTGGATCGTTGGCGGCGTCATAGGC 9726 28 100.0 32 ............................ ACACTGACATGGAGAACGCGAGCTCGCTTGAT 9786 28 100.0 32 ............................ AAAGATTAGCGATGCGGCCTTCCCAGCGATTA 9846 28 100.0 32 ............................ ATGGTGATCACTGTGTCTGAGCTGATGCTGCG 9906 28 100.0 32 ............................ GCGCCGTGGATCCCCACCCGCGACAAACTGAA 9966 28 100.0 32 ............................ GAACTCAGCGGTGACTCTGAGACGACGAGGAC 10026 28 100.0 32 ............................ ATTGCAGATATTCATCAGCCCGAGCTGCGCAT 10086 28 100.0 32 ............................ GGTTTGCCCCAGGCAACAGAGAGTCAGTCGGT 10146 28 100.0 32 ............................ ATGTCGAGGGAAGCAAGATGGACGTTTGCTGG 10206 28 100.0 32 ............................ CAGGTAATCGTTCATTGCCATTTTATTCATGT 10266 28 100.0 32 ............................ GTGCGTCCGGGTGACCAAACCCGGCACTGGAT 10326 28 100.0 32 ............................ TCTCAAAGAGGCAATCATGCATCACTTAGTTA 10386 28 100.0 32 ............................ ACTGCGGCCCATCGCGTTTTCAACCTGCTTGC 10446 28 100.0 32 ............................ AATCCGGTTGCTTCACCGCCTAGTTCGCCCAG 10506 28 100.0 32 ............................ GTTAAAAGTGCTTTTGGAGGAGGTCGCCGAGC 10566 28 100.0 32 ............................ AAAGCGGCGCGCGCGAAACAATCCGGCTTTCG 10626 28 100.0 32 ............................ GTTGGGTTACGCGGCCGTGGCCGCCACGGCGG 10686 28 100.0 32 ............................ TGCTCGATGGAAACGAGCATTCGCATTCTAGG 10746 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 38 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TCGCTAAACCTATCACTTTTTGGCGGATTTTATTTTGTATTGCGTCTTGCAATGGCTACGTAAGACGTGCTCTGAACGTAGGGCCTGATGCTTGGTTTTACGCCCGCGCGTCCGCTCACGCCATACCTTAAAGCTGCGTGGTTTTAACTCGCGCCGCATCAAAGCGATGACGTCATCCTGACGCAAGCCATACAGCGTCTCAATCGCCTCAAACGGGGTTCTATCTTCCCACGCCATTTCAATGATCCGGTCAATGTCTCCYGGTTGCTCGTTCAATGCCATATCGGTCTCCTTGCTCTAGTGGCAAACAGTACGCGTMGAGCATGAAAGACCGATCAGCGTGAGCCCTCAGACTGAGCAATGCTTTTACCCTTGTTTTTGGGATATTTAGAAATAAATAGCGAATACAGTCAGTTACGACTGGGCGTTTTTAATAAGGGTAAAAAACGATTTTTATCCTAACGGCCTGTTGTCACAGGCTATTATTTCGTTATTCTATA # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 27-1297 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUFF01000045.1 Salinivibrio sp. IB643 scaffold45.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 27 28 100.0 32 ............................ GTTTGATAGTTCTACTCGCGCTGATTTGCCGT 87 28 100.0 32 ............................ AAACCGCAGTTAAGGGGGATGAATGGCGATCT 147 28 100.0 15 ............................ GCTGACGTCGGAATG Deletion [190] 190 28 100.0 32 ............................ GTTTGATAGTTCTACTCGCGCTGATTTGCCGT 250 28 100.0 32 ............................ AAACCGCAGTTAAGGGGGATGAATGGCGATCT 310 28 100.0 32 ............................ GCTGACGTCGGTTACATAGTGCCAGTGTCATT 370 28 100.0 32 ............................ TGTGGTCTATCTCGGCTTTGACATTCATGTAT 430 28 100.0 32 ............................ GGAAAACCTTACGAAAACGATGCCGTCAAAGT 490 28 100.0 32 ............................ TGTCGCACCTCGTATCGCTCGCCGCTGTCGGG 550 28 96.4 32 .....G...................... GCACCCGGCGCGCAGATGGTCAGCCCTCAAGA 610 28 100.0 32 ............................ ACAGGGCGTTTATGGTGATGATTCAGCGTTTC 670 28 100.0 32 ............................ ATGTTCAGAATTGTCAAAGGGTTTTTTGGATA 730 28 100.0 32 ............................ TTGTTGGGACACTCTAGATCTCTTTTAACCAT 790 28 100.0 32 ............................ TCAATCGGCTGTAAGCCTAAATGATCGCGCAT 850 28 100.0 32 ............................ ATTTTGTGCTATGGCTGGCGGTGTTACTTTTT 910 28 100.0 32 ............................ GCCACAGTATATCTCTACAAAATACCGATTGT 970 28 100.0 32 ............................ TTTTCTGCACTGACCGCGCCRCCAATCATAAT 1030 28 100.0 32 ............................ TACCTAATGGATACTGACGCGCGCCAACCATC 1090 28 100.0 32 ............................ AAATACTCACCACGCCAAAGCGGATAGGCATC 1150 28 100.0 32 ............................ GATTGGCGTGATGGTCGAAAGCGTCTTGATGT 1210 28 100.0 32 ............................ CGTATTATTAATTCTTTATTTAATTTTATTTC 1270 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 22 28 99.8 31 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GCCTTCTGCCGTGGATTCGATGAATGG # Right flank : AAGATTAACGACCTGGCCGTCTGTCACGCTCAGAGGTTAATCGTTGGCCTCGATGTCGGAGGCGCGCAGTCCGCTTGGGTAATACATGACAGACATCGCACTGGCGCTTGTCCGACCTACACACCATTTTAATATCGGCGGTGTCATTGGCTTACATTGGTTATCGGAACAGCCACTTTTGGCCCGATGATACCATTGGCGTAGGTGACACAAGCCCCAGCACGGTGTTGGATAGGTGCACATTGCCAACGGGCGCCTGTCACGATCAGTGCTAATTTGACGACGATGGTGCATAGCGTAAGTCATACCAAGCTTAAATGAGAATCTTTATGTGTGCTGCTGTACACCAACGTTGTTCGGCTGAATCAATATGAGTTAAAAGTTGGGAGTCACTGACAAAAGCGCTATATTCATTATTCATATTTGTGAATAAGTTAGATAGTTATGGCGACAACAAGTTTAAGCTTAGGGGAACACTGGGAAGCGTTTATTAAAAACGA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [20.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 267-2514 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUFF01000062.1 Salinivibrio sp. IB643 scaffold62.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 267 28 100.0 32 ............................ TATATCATCAAAGCCGTGGGCTATGCGGCGAA 327 28 100.0 32 ............................ TCGGTTACTGCGTTTAATGATTCCTCGGCAAA 387 28 100.0 32 ............................ TGTATTGAGCCGCGCCAGCATCAACAAAGCGG 447 28 100.0 32 ............................ GCGTTCGATGCGGCCAATGGTGCTTGGCGAAA 507 28 100.0 32 ............................ GTTGCGAAAAGTTCCTTTCTTTTCACGAGACG 567 28 100.0 32 ............................ TCATCGATACCGGGGTGATTGTCGAGCGTGGT 627 28 100.0 32 ............................ GCCCGCGGCGCCCAAGCTCACCGTCAGCGTTT 687 28 100.0 32 ............................ CGCGACGCGGCGGCAACTGGTACAATGGGTCG 747 28 100.0 32 ............................ TGCTAGCTTTCCCTCATAGTCGCCAAACGGGT 807 28 100.0 32 ............................ AGCAAAAAACCGGCATTCCAGCGGAAGAAATC 867 28 100.0 32 ............................ TTAATCGCATTGAATCACTCGAGCGCGAGCTA 927 28 100.0 32 ............................ GGTCCCGCCACGCTGAACCTGGGCACTCCCCG 987 28 100.0 32 ............................ GTGTTGGGCGATTGCATTTTGCCCAATGTGCT 1047 28 100.0 32 ............................ GTTACGTCATCGAGCGGCCAGTCAGCCTTGAC 1107 28 100.0 32 ............................ GTTCGGCGGCTTTCCAGCTGCAAGGAGAATCA 1167 28 100.0 32 ............................ GCCCGCGGCGCCTAAGCTCACCGTCAGCGTTT 1227 28 100.0 32 ............................ GAGCGAGTTGCTGCGCCGCTTGCTCATCGAGT 1287 28 100.0 32 ............................ TTTTGGCGCGCGCTGGCTGTAACCATCACCAA 1347 28 100.0 32 ............................ GTTGAGGGCACGTGGCACGGCAAACCGATCAA 1407 28 100.0 32 ............................ TTTGCCAACGTCAGCGGCTTAATAACCGGCCT 1467 28 100.0 32 ............................ TTTCCAGACAATTGCGCCACGTAGCTCGTTGG 1527 28 100.0 32 ............................ GCTTCGGCAACACCGCAGCGGCTGTTCAATGC 1587 28 100.0 32 ............................ TCCCAAAAAGCAAAAACCCCGTTTCATTGAGC 1647 28 100.0 32 ............................ CTGCCAATGGCGCGACTGATTAAACAGACAAA 1707 28 100.0 32 ............................ TCCAAGTCGAATGACGCCTCCATCATACCATT 1767 28 100.0 32 ............................ ATTGTACGCAACGCGCCAAAGTCTAAGATTCC 1827 28 96.4 32 .....T...................... GATATAAATCCGATACCAGCCGTCATTTAATT 1887 28 100.0 32 ............................ GTTGGAAGGCGCAACATCAAACCGGATAAATT 1947 28 100.0 32 ............................ TACAAGTCGCTACGTCATTCCGCTCGGGCACA 2007 28 100.0 32 ............................ GTTTTACAGTGTCACCGGCGGGCGTCGGCAAT 2067 28 100.0 32 ............................ AAGACGTAAAGTCTGCGTCGTGGGCGTGTAGG 2127 28 100.0 32 ............................ GGCTCTTTGTGTCCCCTGCTCTAATCCGCTAG 2187 28 100.0 32 ............................ ATCATACCATTTGCGCGCTGGTTGCTCACGCT 2247 28 100.0 32 ............................ CTTATATAGAGCAACGCAACTATGACCCATTC 2307 28 100.0 32 ............................ CTGCTCCTCCTTCAACATTCTGGTGTAAGAGC 2367 28 100.0 32 ............................ AGCCGGCCTAATTGTTCCTTGTCATAAGCCAC 2427 28 100.0 32 ............................ GGCACAAAATGGCGAATCCGCCCGGGCCTTAT 2487 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 38 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ACAAGGACCAACCCTTCACCTGTTATGGGCTCAGCCGACACAAGGACCAACCCTTCACCTGTTATGGGCTCAGCCGACGCGAACCCGATCAGCAATCTGCGGTGCCGTGTTTTTGAGGGAGAAACCCCTCTTTACCCCTTCTTTTTGGGCTCTTTAAAAATAAACTTTAAATACAGCTGGTTACGGCAGGCCGTTTTTAACAAGGGTAAAAGGCCATTTTTATCCTAACGGCCTGTTGTTACTGACGATTGTTAGGTTATTCTATTG # Right flank : AAGATTAACGACCTGGCCGTCTGCCACGATCGAGGTTAATCGTTGGCCTCAATGTCGGATGGCGGTAAGCGGTTAATAAACCCCACATACCCATAAGACACGGGCTTTGCCATAGTACCTTTTTGAACGGAGGTACCATGAAACAAGCACAAAAACGCGCGCACTGGGCGGCGATTATTGAACAACAAAAGCAAAGCACAGTGTCCATTAAGCAGTTTTGCCAAGACAACGCTATTCCCTATCAAACTTTTTATTATTGGTCGAAGCGATTACGTGAACACCAACAAGCGCAAACCGTGCAGCCGGTTGTGGTCGACGCGTCCGGTCACTTACCAGGGGCGTCCGTCGTGCTTGTCTTTGCCAATGGCATTCGCGCCGAGTTACCCGCCACGCTCAACGCCGCACAAATCAAACACTGGGTGGATGCACTGCAATGACGCCTTCTGGCAAGGTATTCTTGGTCTCTGGCGTCACCGATATGCGCAAGTCGATTGACGGTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2346-151 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUFF01000073.1 Salinivibrio sp. IB643 scaffold73.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 2345 28 100.0 32 ............................ GAAGAGCGTTTAGCGTTTGGCGTTAACTTGCC 2285 28 100.0 32 ............................ ATCATCTGAACCATCATCGGGATTTTCGTTAT 2225 28 100.0 32 ............................ TCAACGAACAAGCCTTTAGAATCCTCGTTAGC 2165 28 100.0 32 ............................ GGCCGAAGAAATCGCCACCTTGGCGCAGCTTG 2105 28 100.0 32 ............................ CCAACAAGGCGCAGAGGGGGAGCTATTGCGAG 2045 28 100.0 32 ............................ ATAACTACTCTCGTTGCTCGTTTGTTTTTAGT 1985 28 100.0 32 ............................ TCCGCCACACGCACACCTAATTTGATACTGAC 1925 28 100.0 32 ............................ ATAAAATTACCAATGGTAACGGCCAAGGGAAT 1865 28 100.0 32 ............................ TAACGTTCGTGCTCTTTACACGAACGCGTCGC 1805 28 100.0 32 ............................ ACTTGCAGGCCGACGTCACGCAGGCGCAATAC 1745 28 100.0 32 ............................ AACGCATCGACGAACGCCAACCTGATACACGT 1685 28 100.0 32 ............................ GACAACGGCGAGGCGTTAGAGGCTACGTCAAT 1625 28 100.0 32 ............................ TTTGTATGTCGTTATCCAGACCAGTGTGGACA 1565 28 100.0 32 ............................ GAGACCACACGTGATTTAAAGATTTTGATTCA 1505 28 100.0 32 ............................ CATCAACGCGAACAACGCGCTAAGAAACGGCC 1445 28 100.0 32 ............................ ATTGAACTGGAGCAGTGGAGCGCACGGATTGC 1385 28 100.0 32 ............................ TTTGGATTGAATTTATGGCCCTCGGGCGTCAC 1325 28 100.0 32 ............................ TTTAATTCTGTCCAGTGGGGCGGCGTCATTGG 1265 28 100.0 32 ............................ TTAATCGCCTGATTGCGGAATTGACGCTCCAT 1205 28 100.0 32 ............................ ATCGGAACCTCCATCAGAGCCATCGTCATTAT 1145 28 100.0 39 ............................ GCCGAAATTGCTCGTCAAAGTCTTTCGCGCACTCATAGC 1078 28 100.0 32 ............................ GCAACCGCTCGATAAAAACGGCGAGGTGCATG 1018 28 100.0 32 ............................ TACCCAAAGCCGCGCCCGCACACCACCTTGGC 958 28 100.0 32 ............................ TTGAAAACCTTATCACCGGTGAAGATGATAAC 898 28 100.0 32 ............................ AGCGAGCGTACGGGCCTCACCGCTTCGATCGT 838 28 100.0 32 ............................ TCGATGAGGTCAGGCCGGTCATCGCAAGCTAC 778 28 100.0 32 ............................ AGTTGCCGCCAACGATCGGTGAGCGAGCAATG 718 28 100.0 32 ............................ TATTCGTAGCCGTGCAAACATATCTGCTGTTC 658 28 100.0 32 ............................ ATAAAAATCACACGCGTGCTTAAAGGCCGTTT 598 28 100.0 32 ............................ CAATCGACACAGTGGCACGCGCGCCAATAATG 538 28 100.0 32 ............................ CTTGCGTTCGCGACGAATAAACGCCTTAGCGG 478 28 100.0 32 ............................ GATCATCGGCGCGGTGCTTAGCGTTTGCGTTT 418 28 100.0 32 ............................ TCACCAGGATAATTGCCATCGGTACTATAAAA 358 28 100.0 32 ............................ AGCTCCCAAGTGATGTTAGATTTCGCTTTAGA 298 28 100.0 32 ............................ TCGCGAATGAGGCCACCTTTTCCGGCCACTGT 238 28 100.0 32 ............................ GATCGTTGGCGGCAACTGGAACAACGGCAGCA 178 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ======================================= ================== 37 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TAAAGCTGCGTGGTTTTAACTCGCGCCGCATCAAAGCGATGACGTCATCCTGACGCAAGCCATACAGCGTCTCAATCGCCTCAAACGGGGTTCTATCTTCCCACGCCATTTCAATGATCCGGTCAATGTCTCCCGGTTGCTCGTTCAATGCCATATCGGTCTCCTTGCTCTAGTGGCAAACAGTACGCGTCGAGCATGAAAGACCGATCAGCGTGAGCCCTCAGACTGAGCAATGCTTTTACCCTTGMTTTTGGGATATTTAGAAATAAATAGCGAATACAGTTAGTTACGACTGGGCGTTTTTAATAAGGGTAAAAAACGATTTTTATCCTAACGGCCTGTTGTCACAGGCTATTATTTCGTTATTCTAT # Right flank : AAGATTAACGACCTGGCCGTCTGTCACGCTCAGAGGTTAATCGTTGGCCTCGATGTCGGAGGCGCGCAGTCCGCTTGGGTAATACATGACAGACATCGCACTGGCGCTTGTCCGACCTACACACCATTTTAATATCGGCGGTGTCATTGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 82570-80742 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUFF01000008.1 Salinivibrio sp. IB643 scaffold8.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 82569 28 100.0 32 ............................ ATCAAGCCAGTCAGGTTTTGTCCTGAGCCATC 82509 28 100.0 32 ............................ AAGCGGCACCGCAACCGCAGACGTACCAGCGG 82449 28 100.0 32 ............................ AGCCGATGCTGACAAGTTGCTAATGTCTTTAC 82389 28 100.0 32 ............................ AGTCGATGATGCAAAATGTCACTAAAAAACTC 82329 28 100.0 32 ............................ GCACTGGAATGTGTCGTTGACGTGTCGTGCGA 82269 28 100.0 32 ............................ CCGCGACTTAGGAGTTTTGCAGCTCGCTAAGT 82209 28 96.4 32 .............T.............. GCTCTGCTCTATGAGGCTATAGACCACCAGCA 82149 28 100.0 32 ............................ AAGGAAACACTGAGGCGAGAACTCTTGAAATT 82089 28 100.0 32 ............................ ATCATCAGCCGCTCAGAGGCTGAGCGCATCTT 82029 28 100.0 32 ............................ TGATGCCCTTCAATTAGGAGTTGTATTAATCA 81969 28 100.0 32 ............................ TTTTATGCGACGTTGCGTTTTTTGGTCATTAG 81909 28 100.0 32 ............................ ACATGCACCTCGCCGTTTTTATCGAGCGGTTG 81849 28 100.0 32 ............................ TTTGCCAGCGCCCACAAAAGCAAACCGACGCC 81789 28 100.0 32 ............................ ATCGATGTTTTGATGCAGACTGTAGGTTTCAA 81729 28 100.0 32 ............................ TTTGCCAGCGCCCACAAAAGCAAACCGACGCC 81669 28 100.0 32 ............................ GCGCTGATTACGAAAACGAAATTGCCATGGTG 81609 28 100.0 32 ............................ CCGCGAAAAGCCACCGCCTGATGCCTATTTAA 81549 28 100.0 32 ............................ TCCTGATGATCCGCCTTGGCCTTTCTTCTAAC 81489 28 100.0 32 ............................ AAAAGGAGTTAGCCGCCCTCGTCGGAGTGAGT 81429 28 100.0 32 ............................ CCGAGTGGGAAATCATTTTTTTACTTGTCGAT 81369 28 100.0 32 ............................ TCAATAATGGTCATGGTGTGTGTCCTTTGTTT 81309 28 100.0 32 ............................ GCTATTCGCGCGAATACCAAATCGCGGCCAAA 81249 28 100.0 32 ............................ CACATGCTAGCCAGCCCTCGCCATATCTAGCC 81189 28 100.0 32 ............................ ACATCAAAATACCGTCGCTTATATTTTAAATT 81129 28 100.0 32 ............................ ATACCTAGCCCTATTATATTTGTGGTGTTTCT 81069 28 100.0 32 ............................ TATGAATTTATCAAACTGATCACGAATAAATG 81009 28 100.0 32 ............................ ATCAAGAATCATGACGTAGCTAGAAACTTCAA 80949 28 100.0 32 ............................ CTTGAGCGCGACAAGCAAATCATCAACAGCCA 80889 28 100.0 32 ............................ TCTCGGTTGGTCATGCTGGTGGCGTGTTGTAG 80829 28 100.0 32 ............................ GCAAAAGTAAGGAGTGGAGCAAGGAAGCCAAG 80769 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 31 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TGCAAGACTATGCCTACTTCAAACGCTGGAACTACAAATCGCCGCAGCGACTGTATAAAAACCTCGATCGGCGCGCGGCCGCGATTGCCAGCAAAAATGGTTACGATGAGGAGGAAGTAAAGCGTCGTTTGTTGGAAAACATTAAAACGGACGACAAACGCTGGTCACTGCCTTTTATTCAAGTGACCAGCCTTTCGAGCCAAAAACGAGCAGGGCAGCCAAATACCGAGTTTGCTTTGTATATCGAGCGGGAAATAACCAAACAGCCGCCAAACAAGGACCAACCCTTCACCTGTTATGGGCTCAGCCGACGCGAACCCGATCAGCAATCTGCGGTGCCGTGTTTTTGAGGGGGAAACCCCTCTTTACCCCTTCTTTTTGGGCTCTTTAAAAATAAACTTTAAATACAGCTGGTTACGGCAGGCCGTTTTTAACAAGGGTAAAAGGCCATTTTTATCCTAACGGCCTGTTGTTACTGACGATTGTTAGGTTATTCTATT # Right flank : AGATTAACGACCTGGCCGTCTGCCACGATCGAGGTTAATCGTTGGCCTCAATGTCGGATGGCGCGCGGCGTAAATCATACCAAGTTTGTACGATCGAGTTGGCGCTTATGCCGACCTACGCGAACTTTAACGTCGGTGGTACCATTGGCGTAGGTGACACAAGCCCCGGCAAAGTGTTAGGTATGTGAAAACTGCTAACGGGCGCCTGTCACGATCAGTGCCAATTTTAACGACGATGTCGGATGGCGCGCGGCGTAAATCACACCAAGTTTGTACGATCGAGTTGGCGCTTATGCCGACCTACGCGAACTTTGACATCGGTGGTGCCATTGGCGACCGAGACACAAGCCCCAGCACGGTGTTGGATATGTGATAACTGTCAAAGGGCGCCTGTCACGATCAGGGGTTAATCGTTGGCCTCGATGTCGGATGGCGCCAGTTGCACTGCGCGCGGCGCAAATCGTACCAAGTTTGCACGATTGAGTTGGCGCTTATGCCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //