Array 1 415324-414335 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDFC010000034.1 Pseudomonas aeruginosa strain ZS-PA-16 NODE_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 415323 28 96.4 32 .............C.............. CGCAACAAGCATGGAGAACAGCATCAATTCGC 415263 28 96.4 32 .............C.............. TCGGCCCGTCCAGAACGTCACACGCTCGCCAT 415203 28 96.4 32 .............C.............. TTTGTCTCGATGATCATTTTGACGCGGCGCTC 415143 28 96.4 32 .............C.............. ATCACGGCCACCCGAACACGTCGCCCAGGAAC 415083 28 96.4 32 .............C.............. CGTGCCACCACCCGTTCCGCCGCCATCACCAT 415023 28 96.4 32 .............C.............. GAAGAACACGCTGGCCGGTGAGTTCTCCGGGC 414963 28 96.4 33 .............C.............. ATGCAGCCAGGGCTTACTCCGCTGCTGCTGGAC 414902 28 96.4 32 .............C.............. TTGAGCTTGTCGTTGTACTCGTCGAGGCTCAT 414842 28 100.0 32 ............................ ATACTGACTCAGCCAGGGAAAAGTCACTTGGA 414782 28 100.0 32 ............................ AGCGTGCCATGGCGGCGGTAAGTCAAACCGTT 414722 28 100.0 32 ............................ TGGTCGAACAGATGGCGGTCCTCGGCCAACTG 414662 28 100.0 32 ............................ ACGTCGGAACGCAACTACCTGACCGCGTTGGT 414602 28 100.0 32 ............................ ATCAGGTACAGCACCAGGGCACCGAAGACGTT 414542 28 100.0 32 ............................ CGCAACGTTCGTGATCTGCCGTTCGCCGCCCA 414482 28 100.0 32 ............................ ATCGACCACGACAGTGCTTCCCTGGTCTATTC 414422 28 100.0 32 ............................ ATTGGCCGTGCAAGGTCCACCAGTCGATGCTT 414362 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 17 28 98.3 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCACTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGTTGCATCGCCCATCACAAGACCTTTCGCGCTCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAACAGCTTGAGCAGCAAACATGAAGCCCGCTCGAACGTCCCGTAGGGCGAATACCGCCACAGGCGGTATCCGCCGATGCCCCGGACAGCCGGCGGATAACCGCAAGC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.89, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : GTTCACTGCCGTACAGGCAGCTAAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //