Array 1 64-1933 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJZR01000001.1 Capnocytophaga sp. oral taxon 412 str. F0487 ctg120005442967, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 64 46 97.8 30 ................................C............. TACAGGTGTCATTACCTATCTATGACTTGT 140 46 100.0 30 .............................................. AACTGGTACATTAATGTGTATGAGGAGTAT 216 46 100.0 30 .............................................. TTTTTATCTATATTCATATAGCAATTTTTT 292 46 100.0 30 .............................................. ACGGGTATTTAGACCCTAACGATGCTCACA 368 46 100.0 30 .............................................. TACCGCTTCTTAATTGCTTTTCACACTCAA 444 46 100.0 30 .............................................. TAAACTTCTCTAATGTTAGCATTTACTCCT 520 46 100.0 30 .............................................. TGATACACTTGACGAATTAGAAGTTACTTC 596 46 100.0 30 .............................................. TATTCAGTGTATCTATTCTATTAAGAACAT 672 46 100.0 30 .............................................. CTTAAGGGTGGAACGATGAGTGTAACTGTA 748 46 100.0 30 .............................................. ATTAAGGAAAGGGTTTAATTGGTTGTACTT 824 46 100.0 30 .............................................. ATTATCCCAATTAAAGTATGTCGCACTTGC 900 46 100.0 30 .............................................. TGAACAAACCGCACAAAAGTAGAAGTTTTT 976 46 100.0 30 .............................................. GCTTGTACTTTTTTCATACTCAAACACTTA 1052 46 100.0 30 .............................................. TAGTAGCAGGTTCGATTCCTGCCTTGCTTT 1128 46 100.0 30 .............................................. CCACTTAGAGCACGGTAAATAAGTCGTGTC 1204 46 100.0 30 .............................................. ATACTCTTTCAATCCTTGACCACCAAACTG 1280 46 100.0 30 .............................................. CGTTCGTGCTATCATAAAACAGATGGGTAA 1356 46 97.8 30 ................................C............. CGTTTGGGTCGTATCAAGTAATTTTAACTA 1432 46 97.8 30 ................................C............. TGATTTTATTTTATTATTACTTCATAAGAA 1508 46 97.8 30 ................................C............. CTGAAATAGTTGTCAAATGGTTTGGCTTTC 1584 46 97.8 30 ................................C............. CGAATGGTATATAAGGAAGAGCCTTTACGT 1660 46 97.8 30 ................................C............. CCGTGGAGGTGAGAGATGAAGATGTGCTTG 1736 46 97.8 30 ................................C............. GTTATTTAAAGTTGAATTTACAAAGTTATC 1812 46 97.8 30 ................................C............. TAGCTGTAGTAGGTACTAAACAACCTTCAT 1888 46 97.8 0 ................................C............. | ========== ====== ====== ====== ============================================== ============================== ================== 25 46 99.2 30 GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACAAC # Left flank : TTCAAATTTTGTAGTTTTGTGATTGATAACAACATTACTAAGCAAAATCCAATACCCGCTCTTG # Right flank : CCTCAATCTTTTAAAGGTTTTAGTATCAATCAGTTTTGCTTAAAAACAGTACTGAAAAACCTCCTCTTTTACCTTATAAACAAAGGCTAAAGAGGAGGTTTTCTCTTTCCTATTCTTCTTAAAAAAGCTCTAATTGCACATAGGTTTCGGGAGCTGCTGTTTCTCTCTGACAGTAAAAGAACTCCATATCGCCAAACTGCTTATCGGTTAGACACATAATAGCTATATTGCCATACTGAGGTAAGTTTTGTTTTACACGATTGATATGCACTTGGGCATTCTCTCTACTAGGGCAATGCCTTACGTACATCGAAAACTGAAAGAGCGTAAAACCGTCCTTTATGAGTTTATCACGAAAGTTCTGTGCTTCTTTACGCATCTTTTTTGTTTCTGTTGGCAAATCGTATAATACTAATACCCACATAATTCTATAAGCATTGTATCGGTCAGCTATGATCATAATTCAGGATAAGCTATCAGTCGCTTTTCACCCGTATAGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACAAC # Alternate repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.74%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //