Array 1 36767-38753 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASXG01000124.1 Amycolatopsis orientalis DSM 43388 contig_47, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 36767 29 100.0 32 ............................. AGGTTGACGAGCACGTCGCATCGATAGCTAAT 36828 29 100.0 32 ............................. AGATCAGCTGTGTACTGCCGCCTGAGCTGGGC 36889 29 96.6 32 ............................C GCCGCAGGGCACGAGCCCCCGAAGTCCGGGAA 36950 29 96.6 32 ............................C TGTCGCAGAGAAGTTCTGAGCAAGGCTTCGTC 37011 29 96.6 32 ............................C CCATACCCCAGCGGGAAGTTGACCGATCCGAT 37072 29 100.0 32 ............................. GGCTGAGCCACCGTGTGGAAGAAACTGTGGAC 37133 29 100.0 32 ............................. GTCACCAGGTCGGTGTTGAACGCGTACTCGTC 37194 29 100.0 32 ............................. GTCTGCAGGGGTCGAGCCTGAACGCGGGAAAC 37255 29 100.0 31 ............................. TACTGGACGCGTGGTGAAGGTGCGGCGCGCT 37315 29 96.6 32 ............................C ATCGCGATCCAGGCCGATGACGCCACGGACGC 37376 29 100.0 32 ............................. CCTCTGCGGACCCGGAGAACCTGACCGCCCCG 37437 29 96.6 32 ............................C CCCCGGTTCAGCCATGCGGTGAGCCTGTCCAC 37498 29 100.0 32 ............................. AAGGATGGTCGATCCGGGACCGTTGATCGTCC 37559 29 100.0 32 ............................. GCGCGGATCCAAGGTGCACTAGGGAACATCCT 37620 29 100.0 32 ............................. GACGGCAAACCCGACCCGCACCCCTTCCGACT 37681 29 100.0 32 ............................. AGGGTCTGTACGCGCTGCCGACTTCCGGCCTG 37742 29 96.6 32 ............................C AGGTAGTAGATCCCCGGATGCTGGATGAGGAT 37803 29 96.6 32 ............................C GCCACATGGCTGCTGAAGAACGGTGGGGCGGC 37864 29 100.0 38 ............................. CGTAACGCCATCAGCCACGTGCCGTCAGAGCCACCAGT 37931 29 100.0 32 ............................. CAGTATCTGCTGGTGGGTAACCGGGAGCCGCT 37992 29 96.6 32 ............................C CCGATGTACGACTCGCTGTACTACATCCTGAC 38053 29 96.6 32 ............................C CGGTACTGGGGCGATCACCCTGGCGGCTGGAA 38114 29 100.0 32 ............................. CAGTACGCCGCGTTCCTTCGCCCTAAGCGGAC 38175 29 100.0 32 ............................. GGCGGTAGGTTCGCCGAGGACGCCCGCCGGGC 38236 29 96.6 32 ............................A TCAACCCCGGGATGCCGGACCCGGCGACCATC 38297 29 100.0 33 ............................. GGGGACACCTACGCTCAATCCGGATGGACAGCC 38359 29 100.0 32 ............................. CCACCCCCAACGGCCGGAAACTGTGGAAGTGG 38420 29 96.6 32 ............................C GTCGCCCCCGCGGAAGTACTCGCCCGCGGAAC 38481 29 96.6 32 ............................C GTGAAATGGCTTGGCACAAAGACGCCGTTGAC 38542 29 96.6 32 ............................C AACAGCGTGTCACCGACTGTCCACCCGGACAC 38603 29 96.6 32 ............................C GCCATGTCAGCTCGATCAACCAGATCCCGGAC 38664 29 96.6 32 ............................C TGCCAGTACCGGCACTGGCGCAGCGGCAACAT 38725 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= ====================================== ================== 33 29 98.4 32 GTGCTCCCCGCGCAGGCGGGGATGATCCG # Left flank : CACATGATCGTCATCGTCCTGACCGCCGTGCCACCCGGACTCCGCGGGCACCTCACCCGGTGGCTACTGGAAATCAGTCCAGGCGTGTTCGTCGGGCATCTACCCACCCGCGTCCGCGAACTGACATGGGAACGCGTCATCGAGTTCGTCGACGACGGACGAGCGCTCATGGTTTACACCGTGAACGGCGAGCAACGACTCGCGTTCGAGGTACACGGACACGACTGGACACCTGTCGACTACGACGGCATCACCCTCATACGCCGACAAACGGTCCCCGACTACATCCCGGCCAACGGACCGACACAGCAACAACGAAGACCAGCCCGCCCCTCCCGTGGTGGAACGTCCATGCGAGATGAGACCGTGTGGAAACGTCGGCAAGCGCGACGAAAATTCCGCCCGAAACCACCGCCGGCAAACGAGAAAGATTGATCTTGAGTCGGGGCAAAGTGAAGCAAATCGAGCAGATCTGATCACATCGACCCAGGTCAAGAAGT # Right flank : CTCTGCGAAATCTTGTCACCGACACGAGGCCCACGTCGGCAGGACCGTACGTAGAGATGCCGAAGCGAGGGTCAACGCGGCGTTGCCCCTCGCCGAACTCAAGCTTGGGCTCGGTGAGGATCTCGACGTACATCAGCTACTTTTCCGACGGCGGCGGCCTCCAGAGCGTGGCGGCCGGTCGGTTGTATGTCGACGTGCGCTTGGCGCGGGTCGATCTTGATGCTGCTAGCCGCGCGCCGGGAGGCGGCAGGCGGCGACTTCGGTCGAGCGGGGTTTCGGCAGAAAGGTGGAAATAGTCCGGTTAGGACCGTCTGGTCAGTGGCGATCGTCCTCGGGGCAGGGGACTTTGGCCACTACATCTGCCGTCGCGGGGGCGAACACCATGCCTGCAGACAGCAGGCCGGCGATACGGCCGGATCAGGAGGTATGGCATGGCTGTTTTCGCCCGCGGGCCGGTGGATCTGAACACCACCGGTCACTACCTGCATTGGGGCGTCATC # Questionable array : NO Score: 5.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCAGGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.60,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [50.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //