Array 1 1-732 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTMW01000131.1 Bacteroides sp. OF03-11BH OF03-11BH.Scaf131, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1 46 97.9 29 -.............................................. CCAATTAACCAACAGCAGAACGGAACGCA 76 47 100.0 30 ............................................... TAACGTGACGCGATACTTGCAGACTTCGAT 153 47 100.0 30 ............................................... CAACGTGACGCGATACTTGCAGACTTCGAT 230 47 100.0 29 ............................................... TAAAAAATCTTTCAAACCTTTCTTGTTAA 306 47 100.0 29 ............................................... TACAAAATCTTTCAAACCTTTCTTGTTAA 382 47 100.0 30 ............................................... GCAAAAAGGGCATTTAATCGACAGCTTGAT 459 47 100.0 30 ............................................... AGAAAAAGGGCATTTAATCGACAGCTTGAT 536 47 100.0 29 ............................................... GTTACAAAAAAGTATATCTTCACAAAACA 612 47 100.0 30 ............................................... AAGTGTACAAACAATAAACAGAACAACACT 689 44 93.6 0 ............................................--- | ========== ====== ====== ====== =============================================== ============================== ================== 10 47 99.2 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : | # Right flank : | # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.40,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 581-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTMW01000142.1 Bacteroides sp. OF03-11BH OF03-11BH.Scaf142, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 580 45 95.7 30 --............................................. TAAAGCCCGAATCTCCGACGATAAATAACT 505 47 100.0 30 ............................................... AATCAGGTTTTGTATTTCTAGCCATAAGAT 428 47 100.0 30 ............................................... TAGCAATATTGAAATTTCCTGAATTGCTAG 351 47 100.0 30 ............................................... AGAAAAAGGGCATTTAATCGACAGCTTGAA 274 47 100.0 30 ............................................... GCGTTGCCGGAGGATTTAACGGGTGAGGAC 197 47 100.0 30 ............................................... AGAAAAAGGGCATTTAATCGACAGCTTGAT 120 47 100.0 30 ............................................... GTCAATTCGCTGGTGCTACTACTTCGCTTC 43 43 91.5 0 ...........................................---- | ========== ====== ====== ====== =============================================== ============================== ================== 8 47 98.4 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : | # Right flank : A # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 653-71 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTMW01000134.1 Bacteroides sp. OF03-11BH OF03-11BH.Scaf134, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 652 46 97.9 29 -.............................................. GAATCTAGTGGCCGCAATGTTTTACGCGC 577 47 100.0 30 ............................................... CACAGTTTGCTGGTGCCACCACTTCTCTTA 500 47 100.0 29 ............................................... ACGAAGATACTCTTCAGGATACGTGAACT 424 47 100.0 30 ............................................... GTCAGTTTGCTGGTGCCACCACTTCTCTTC 347 47 100.0 29 ............................................... ACGAAGATATTCTTCAGGGTATGTAAATT 271 47 100.0 30 ............................................... CTACGGTCGTGGTGTGCGACTTCGTCGATA 194 47 100.0 30 ............................................... ACATACGTTCGGAAAAAGACTTTAGCTGCC 117 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 8 47 99.7 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : | # Right flank : TATTACAAAAAAGTATATCTTCACAAAACAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], // Array 1 579-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTMW01000143.1 Bacteroides sp. OF03-11BH OF03-11BH.Scaf143, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 578 45 95.7 30 --............................................. AATCAGGTTTTGTATTTCTAGCCATAAGTG 503 47 100.0 30 ............................................... CAAAAGAAAACGAAAAATTATTAGAAAAAG 426 47 100.0 29 ............................................... AAATTAAGAATATATTCAATTTATTCATA 350 47 100.0 30 ............................................... GCGTTGCCGGAGGATTTAACGGGTGAGGAC 273 47 100.0 29 ............................................... CATAAAGTATATTAAGAAGCTGACTATTA 197 47 100.0 30 ............................................... GTCAATTCGCTGGTGCTACTACTTCGCTTC 120 47 100.0 29 ............................................... TTGCCTAAATAGAATGTTTATGGAAAATA 44 44 93.6 0 ............................................--- | ========== ====== ====== ====== =============================================== ============================== ================== 8 47 98.7 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : | # Right flank : C # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 578-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTMW01000144.1 Bacteroides sp. OF03-11BH OF03-11BH.Scaf144, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 577 44 93.6 30 ---............................................ CAAAAGAAAACGAAAAATTATTAGAAAACA 503 47 100.0 29 ............................................... GAATCTAGTGGCCGCAATGTTTTACGCTA 427 47 100.0 29 ............................................... ACGAAGATACTCTTCAGGATACGTGAACT 351 47 100.0 29 ............................................... CATAAAGTATATTAAGAAGCTGACTATTA 275 47 100.0 29 ............................................... ACGAAGATATTCTTCAGGGTATGTAAATT 199 47 100.0 29 ............................................... TTGCCTAAATAGAATGTTTATGGAAAATA 123 47 100.0 30 ............................................... ACATACGTTCGGAAAAAGACTTTAGCTGCC 46 46 97.9 0 ..............................................- | ========== ====== ====== ====== =============================================== ============================== ================== 8 47 98.9 29 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : | # Right flank : A # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //