Array 1 472690-474791 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVYY01000001.1 Paenibacillus sp. P32E scaffold_0, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================== ================== 472690 32 100.0 40 ................................ TGTTCTTCCGTGGGCGTAGCTCTCTTGTAGCACCGTCGCT 472762 32 100.0 33 ................................ AGTTGTATCCGTTTCATTTTCAGTTGGTTTATC 472827 32 100.0 35 ................................ AAGCACTGTCCAAAGTTGTTGTACGTCCAGTGCTT 472894 32 100.0 35 ................................ TTACATGCCCGGCTTGTGGAGACAGCGGCAGCATA 472961 32 100.0 34 ................................ ACGGTCAACTGGCTTGTCAGCGGCGATGTTTACC 473027 32 100.0 36 ................................ TCTTGTAACTGGCGGTCCAACCACTGCTGATGTCTC 473095 32 100.0 36 ................................ TCCGGAGAAAGCTGCGTATTTCGAGAGAACGCCAGT 473163 32 100.0 33 ................................ ATCGCGTCCGCCACATCATGCGGAATTGTTACC 473228 32 100.0 34 ................................ ATGCGCAAGTTAACGTCAATTAAGCGGCTGCCTG 473294 32 100.0 35 ................................ CATATACCCCTTATCTTCTCACCATGGTATGTTTT 473361 32 96.9 35 ..........C..................... GCAAACGCAATCTCCGTTACCTCGCGCTTGCTCAG 473428 32 100.0 35 ................................ TATGTACTGTTCGTGCAGCTGCTTCTCCACAGATA 473495 32 100.0 35 ................................ TTATAACGACTTTAACTGAACTCCATAACGAGCTA 473562 32 100.0 36 ................................ TCTGCGTTATTGTAGATCGACGTTAAACTCGTATTT 473630 32 100.0 36 ................................ TTTCATCTCCTCGTCTGAAGGTAACGATGGTTTAGG 473698 32 100.0 35 ................................ GTGTATTTGCGGACGTTATCCGCGATCATCATCGC 473765 32 100.0 34 ................................ GAGCAATGCGCCAGTAACACCACCATCTAGTCCA 473831 32 100.0 34 ................................ TTACGAACTACGATACCTAAACCAAATTATAAAA 473897 32 96.9 35 .........T...................... AGACTTACAAAGATGGAAAAAGATATCGCTATGAC 473964 32 100.0 34 ................................ TCTCGAAAACTGCTAGTGGTCGAATCAAGGGGCA 474030 32 100.0 36 ................................ ACGTAAATTAATAGATATGATAGATCAGGAACTAAC 474098 32 100.0 34 ................................ ATTGTTCGCGTAATACTCATTGACTTTACGCCAA 474164 32 100.0 34 ................................ GACTGTAGTGGAGCTAATGCACCAGACAAATAGC 474230 32 100.0 34 ................................ GACTGTAGTGGAGCTAATGCACCAGACAAATAGC 474296 32 100.0 35 ................................ TATGAGTACGGGAGTAGCCATCAACCGCCGCGCCC 474363 32 96.9 36 ...........A.................... AGCGTATTAACTGGTCAGTCAAAAGTACTTGTCGAA 474431 32 96.9 35 ......T......................... TATACCAAGGAATCAAAGAAAACTTACCTGACATC 474498 32 93.8 35 ...A...............T............ AATGTTGCGATTTCCGCTCTGCGGTCCTCTATGGC 474565 32 93.8 34 ...A........A................... TGATCTGCGATCTGACCGATCGTGTGCCGATGGT 474631 32 84.4 34 ...A........A......TA.A......... CCTATTTAGCTGTTAAACTTGGCTGTTTTACGAT 474697 32 84.4 32 ...A........A.A....T.........T.. GTAGAGGCACAGCAGACCATAGCCCGGCAACG 474761 31 71.9 0 ...A.A...T..T.-....T.......ACT.. | ========== ====== ====== ====== ================================ ======================================== ================== 32 32 97.4 35 GTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC # Left flank : AATGTGAATCTATAAGCTTGTATTCCACAATGATACAATAATGACATCACTTTTAGGGAGTACAAAACATATGGCAACTGATAAAAGAGTGTTTACATTACGCTTGAAGGATGACAATTTCAACAAAATTAAATATATCGCAGATAAGAATAAGCGGTCTATTGCTATGCAGATCGAATATTTGATTGAACAACACATAGAACAATTTGAAAAGGAGAAGGGGATTATTGGGACGGGAGAATAGAATAACATTTTTATATAAAAGAATGATCTCTATAGCAACCTGAGGTCATTCTTTTTGTATTTAGCTTGTAAGTTTGATAATCTAGCGCGAACCGGAAGCTCACACGAAATCCTTAGGAGGTTCGCACCATTTACTGTAGAGGGGATTTGAAGACTTTTAGAGAATGTATCATTAAAATAATCTTTGGTTTTAAGAGGTTCGCACTTTTACCGCTTTGAGCCCTTACGAAATAAGGGATTGCGGGCTACCTGTCGCT # Right flank : CCGTAATAACTGAATCACATTTTCGTCATTATCCCTTAGCCCATCCTTCGACCACTGTAGAGCAGAAAGATTAAGCACTAGAAATAAAATAAGAAGCTGTCCTAAGGTTTAGTGCCAAAGGACAGCTTCTTCTTTTATGGCCAACATCAAATCACAAATTTCAATCCACGCGCCCATGCAAAGAGCGACGAACTTACTTCTCCAATAGAATATGCAGTGCTGGATGGTTGCAAGCTGAGTGAATCAATAAAAAAACTAGAAAAACCATAATTGTGATTTATTTTACATTTTTTTGAAGAGTAAAGCTTAAAGTGAGTTTATATTTATTTAACTTCAAATCACAAGAAATTAAATATAAGGGGGTTAGCCATTGAAAGATCCGAAAATTCTGCTAATCAAGGCCCAACTGATCAACTCAATTTGAAACTTTTGCATTGAACATCTTGATCAGCCGTATGAGAAAATAGCGATTGATATGACAGAAACACTCAGCCGAAAAA # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 483725-487461 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVYY01000001.1 Paenibacillus sp. P32E scaffold_0, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =========================================================================== ================== 483725 32 100.0 33 ................................ ATACATCTTTATCCCACCTTTAGCCGATTGAAT 483790 32 100.0 36 ................................ TGATCTATGCATTGAAGGATCTCAAGCTCTCTTCCT 483858 32 100.0 33 ................................ CATTATCTAGAGATACTATTAATTTCAAGGCCA 483923 32 100.0 35 ................................ ATTTGTAGTGTTGCAGTAGTCAAGTAAATTCCAGT 483990 32 100.0 35 ................................ GCTGTTACTGATCTATATGGTACATCCTTCGGCCT 484057 32 100.0 36 ................................ CCTTGTGAGTGTCATTGGTTATCTCCTTTCTCAAAC 484125 32 100.0 35 ................................ TTAGGAACGCTCACGGTGGCCTTGACCATCTGCAG 484192 32 100.0 36 ................................ GATTGATCCTTTTGTGACGCTGCTGACAAGCTCCTG 484260 32 100.0 37 ................................ GCTTAGTATTTCGGTCGTCTCGATGCAGAGATAAAAC 484329 32 100.0 35 ................................ CTTTACTTGTGTCATGGCCGGTCACCTCCCCTGTT 484396 32 100.0 34 ................................ CACTGACTGACCAGGCACATAATATTGCACATTG 484462 32 100.0 34 ................................ AATAACGTTGTGGGTAGCCTGGGGCCGTACCAAC 484528 32 100.0 34 ................................ ACTCCGGCATTCTTTTGGACATGATCTTCTTTCA 484594 32 100.0 36 ................................ AGTTTTGCCGTCGATAGAATCCACCGATTCAAGGGG 484662 32 100.0 33 ................................ TCCGGCTGATTGCGGATCACTCGCAAATTATGT 484727 32 100.0 33 ................................ ACCTCTCCGAAGAAAAAGGCATCATCTATGCAG 484792 32 100.0 35 ................................ TGCCATTTGTTCAAACTGTTTTTTATCTTCTGCTG 484859 32 100.0 34 ................................ TGAAGACGGGAACATTCAGCACGAACCGAATCGC 484925 32 100.0 35 ................................ GTATACGTTCACGGCGCGGATCGGCGGTGGCCGGT 484992 32 100.0 35 ................................ GTGCCATGAGACGTTTTAAATGACATAGCTCGTCC 485059 32 100.0 36 ................................ CGCTCCGTGCCGGACCACTTCACTACGCCGGGAAAG 485127 32 100.0 34 ................................ CCTGCGCGCAAGTCGCCCGGAGTTAAATTACCCA 485193 32 100.0 33 ................................ TCGCAACCGTTGAGAGTGTCGCTCCTTGGGAAG 485258 32 100.0 36 ................................ ATACGTAAAACCTCCGTTATGATAAATTTACGATTG 485326 32 100.0 33 ................................ TGGCGAATGCGGGTATCTATATTGTTATAGCTT 485391 32 100.0 35 ................................ GTTACCCCGACTGCATCCGCGAGCACGGAGTTACC 485458 32 100.0 33 ................................ GCTACGGTCTGCTGTCCGCTGACAAGCGCTGGC 485523 32 100.0 37 ................................ GGTCTTACCGTGCAGAGCCGCGATCAGCGCGTTACCC 485592 32 100.0 37 ................................ GGTCTTACCGTGCAGAGCCGCGATCAGCGCGTTACCC 485661 32 100.0 36 ................................ CTTCAGAAGGCACGCCAATAGATATCAGTGATGAGT 485729 32 100.0 35 ................................ TCAATACTATCAACCTTACAAACCTCTACAATCAA 485796 32 100.0 33 ................................ ACCGGCTCTGCGCCGTGTCTCCGCTTCGAGCAC 485861 32 100.0 34 ................................ CTCCGTGAGCGTGCGCTGCTTATCGCATGTTGCG 485927 32 100.0 35 ................................ AGCGGTATGATCGCCATTACATCGTCACCCACTTA 485994 32 100.0 33 ................................ GGCGTTAAAGCCAAGTGAGAACGATACAAGGAT 486059 32 100.0 35 ................................ CTTCTCCAAAGGAACGTAGGTACGAGTCAGATTTA 486126 32 100.0 34 ................................ CGATCTTAAGACAATCCAGGAACGGCTCCGCCAG 486192 32 100.0 35 ................................ ACCCATGCAACGGCTGAACAGCGCTGTAAGGCTGC 486259 32 100.0 36 ................................ TTCGAGAAACACCTGATTCCATAGAACTGGCTGACT 486327 32 100.0 35 ................................ GCCAACCCGGAGCTACTCCCATGAACCACGTGAAC 486394 32 100.0 35 ................................ TCTCCTTGCGTGCCTCCATACTGCGGCTGAAATAC 486461 32 100.0 33 ................................ CCCATGTACATGACGCTCTCGAACTCCGTCAGA 486526 32 100.0 36 ................................ CAATCTATGATCTACATTGGGACGAAGACACCAAAC 486594 32 100.0 75 ................................ CTCCTGTATTACGCTGTAACCATCGGAGCGTGGATTGAAACCCCATAGCGCTGGCCTGTCACCGGACTTTCTGAG 486701 32 100.0 35 ................................ CCGTTATCAACCGGCGAGTACACGTACTGCTTTGT 486768 32 100.0 35 ................................ TTTGTAGAGTCCTAAACGTTTTAGAGCCAAATCAT 486835 32 100.0 36 ................................ GTCTTCTGCTGCAACATAATGCTTGATGCGGCCTAT 486903 32 100.0 35 ................................ ATCCACTACAGATCAATCAAAGGGTGCATGGCCTA 486970 32 100.0 34 ................................ GTATACCTCACTGATAAGGTTCCAATTGCAATAT 487036 32 100.0 34 ................................ AGCAGTATGCTGCCGTCTGCTTAGGTAAACCCAG 487102 32 100.0 34 ................................ ATATCCGGTTGGCCCCAATGAAATAAAAGAAGTT 487168 32 100.0 34 ................................ TCCTGGATATTGCTCTATTAAGTACTTAGCTAAT 487234 32 100.0 33 ................................ GTCCGACATAACGTCCATTCCGTCAAGTATTTC 487299 32 96.9 33 ..T............................. ATCTCGCCTTTGTAGTCAGTCTGGAATTTAAGC 487364 32 100.0 34 ................................ TCCATGTCCGTAGAGCGGGCGCCAAGTTCTTCGC 487430 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =========================================================================== ================== 56 32 99.9 35 GTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC # Left flank : TATTTAAGTAGGAAGGGGAGCAGAATTGTATGATGGTATTAATCACTTATGATGTTGAAACTACGACTCCAGAGGGGCGCAGAAGGCTGCGCCGGATCGCCAAACACTGTCAAAATTACGGTCAGCGAGTGCAGAATTCTGTGTTTGAATGCGTTGTAGATCCGGTGCAATATAAACAGCTCAAGCAAAAATTAGAAACAGAAATGGATAAGAATAAAGACAGTATACGCTATTATGCCCTCGGAGCCAATTGGAAAAGAAAAGTAGAACACATCGGAGCCAAAGAGAGTTATGATCCGGAAGGGTTTCTCTTAATCTAGTGAACAAGCAAAAGTGCGAACCCCAAGTGCACATGAAAACCCTGGGAGGTTCGCGCTTCTTGCGGGATAAGTAGTTTACCTCATTGTATGTGATTTCAGAAAAGAAAAAATGATCTTTATTAAGAGGTTCGCACTTTTTGGGATCTTATCCCTTATGGGACAAGGGATTTTTGAGTACCT # Right flank : CTCGGTAAGCTTGTTTTTTTATCCGCAGTTAGATGTCACCCCTCATGCAGCAGGGTGTTTTAAAATTCCGATCGTTTCAGAAGGCAGATTCGTTTCTGTCTCCCTAAACCAGAGTATTAATGAAATCGTACGCTAGTCCCTTTTTCATACAGCCTCATAATTTCTTCTCAAACGAACAAGTATCAAAAGCATCGCACATCATGGTAAAATACTATGACTAGTACAGCAACAGTCCAATCTGAATTAGCAGGTGACCGTGTTGAGATTACGAGAATTCATGAACCCTTCCGATTCCTCGGCCTATCGGCAGGCGAAGTGGATCAAACGTTTTTTGCAGACTTATTGGCTTGTGATTTCCCTGCATTTTTTGGCCCAGCTAGGGGCATTTTGGTTTCTGCCGTATGAGAGAGGGGCGCATGAGTTTTATTTTGAGGTGCTTCTGTATCCGACTCTGCTGATGGCAGCGGTGGTGATCATAGCCCAATTGATTGATTACAGCG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //