Array 1 105237-103501 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABWSV010000022.1 Klebsiella pneumoniae strain ZKP24 isolate ZKP24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 105236 28 100.0 33 ............................ CCACCCGAACACCGTGCAGCTCAACCTGAGCAC 105175 28 100.0 33 ............................ TTTGCAACAATATACCACTTCCCGACCTTTGAT 105114 28 100.0 33 ............................ TAGGTTTTTGTTGTCTGATTGAATGGGTTGTCA 105053 28 100.0 33 ............................ TGCTTCTATTAACCTGTTTCTGTAGCTTAAACC 104992 28 100.0 33 ............................ TGATGTGGGAGTGTGGTGTAAAAAACTCTCTTT 104931 28 100.0 33 ............................ TCTTATGCACGGTGTTGGATACGAACCACTCCA 104870 28 100.0 33 ............................ TACCCCATTTCTGTCTTTTGTAAGCTCCATCAC 104809 28 100.0 33 ............................ TATTAATGCTTACGTTTCGTGGTTTGAGGATGA 104748 28 100.0 33 ............................ CGTCGTGAATTACGGCAATACGCTGGACCGCAA 104687 28 100.0 33 ............................ CAGTACCGCCAGCAGCGCCTTGATGCCATGTGG 104626 28 100.0 33 ............................ TTAACTATGCAGCGTAACCGTGCTTTCGTCTCA 104565 28 100.0 33 ............................ CTGCAAAAGCAAAATGTTGCTCTGTCAGGTGCA 104504 28 100.0 33 ............................ TATCAATCTCTGAAATCATTTTGTCTATTTTGT 104443 28 100.0 33 ............................ CGCGACGACCTCGTCATCCTCCCCGCTGCGGCT 104382 28 100.0 33 ............................ TACACCCAGCTCTTTGACGCAAAGGCTCAGGAG 104321 28 100.0 33 ............................ TCCTTGGTTCGTTTCTTCTGATGTTTGCAAGGC 104260 28 100.0 33 ............................ CTGGTTGACGTATGCCGTGATGCTGCTGGTAGG 104199 28 100.0 33 ............................ CATTCGAGTCAGTAAAAGCGTCTAGTGCTGACG 104138 28 100.0 33 ............................ CGCTGTATGCCCCCCATCCTTCGCAAGCACTAC 104077 28 100.0 33 ............................ CGATGACAACTTTGCCTACTTCGCTGCGCTGGC 104016 28 100.0 33 ............................ TTCCTCTTCTTCCTGACAATCAGCGCAGCGCTG 103955 28 100.0 33 ............................ TGCGGGTGGATGACAATAACGCCTGGCGCGCCG 103894 28 100.0 33 ............................ CCTGTTAAGGATGACGCGGGGAAATGGGTTATC 103833 28 100.0 33 ............................ TCGATGGCGAGCTGCTGGTGAAAAAGTCGATAC 103772 28 100.0 33 ............................ TCCAGGCCAGATCTGTTTGGGTTGGTGTCGAAG 103711 28 100.0 33 ............................ TGAAGGTGAGCGCCAAAAGGAGTGGAAGCATGC 103650 28 100.0 33 ............................ CGGCTGCGTTATCCGGCAGCACGAACTGGACCT 103589 28 100.0 33 ............................ TGACCTTAGAGGCTTCACTCAGTGCCACTTTTT 103528 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 29 28 100.0 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TTTACAAAGAACGGCTCTGTATTGATTTGGCATTTTCACTCTCGAGGGAAATGGCGGGCCGCTACGATAAACACAAAGTCTCTGAGGCATTCAGAAAGCGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATCAATGAGCTGATGGGAGGGAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCGCCAGCGGTGCGTGGACGAATGAAGCTGTGGTTTGTCGAACCACGGCCAAATGTTTTTGTCTCAGGCGTCAAAGATTCGGTCGCGCAAACCGTTGTTGATTACCTGTTGCAGTACACGCCTGTGGAATCAGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGTTATGAAATTCGCTACAAGGGTGAGGTCAGAAAGCCGATTATTGATCTCAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATACGTGGATATTGTGGTTAAACTCTCGCTCTTTCACAATATGTTGGT # Right flank : TTGTGAGGGGTCTACCAGCATTGGCGTACTGGAGTCTTCCCTACACATGTGGGACTTAGCAATAAGCGGAATACTCGTATTAGAATAAATATTTTATAGCCAGCGAAACTTAAAATAATTTTTAGCTAATGAAACTGTCGTTTGGGAGAGGTAGGAATATTTTATTGCGAAAGAGAAGGGAACTGTTTAAAGCAATAACGGCGAATGATTCTTATAAAATGAAGGATAGGGAATTCATATGTTTCGACTTTACCAGTCACATGATTTAATACGCCAATTAAATCCTGAAGACTTTCAATATATTTTGACACCAGCAGGTTCGCTAAGAGAAGCGTGTATAAATTACGACCTCTCCTGTGAGGCGAATGGTCACAGCCTCGCTTTTGGCTTACCGAAGGAAATATACAACTCATCTCCACATAAAAGGCCATATGAACGAAGGCAACGTAGCTATGCAGATCCTATCTATGATGAGGTAGAGCACAGGTTACAAATTGGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 114568-113990 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABWSV010000022.1 Klebsiella pneumoniae strain ZKP24 isolate ZKP24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 114567 28 96.4 33 .............A.............. TATGGGTTGCAGTGTAAGAGCGGCAAACGAAGC 114506 28 96.4 33 .............A.............. CGGCTCTTTTTTATCTCCTTCATCCTTCGCTAT 114445 28 100.0 33 ............................ TGATCGGCGTGCCGTTTGTTGGACCCGAAATAG 114384 28 100.0 33 ............................ CGTCATCAGCGCCTTGTTCCAGCGGCGACCACC 114323 28 100.0 33 ............................ TATCGTGCAGAGTCACAACCTGACGGGATTATC 114262 28 100.0 33 ............................ TCGTGCATGGTGAGGATTCTACAGTCGCACCAT 114201 28 100.0 33 ............................ TACCTCCCGGCGTCCGCGCCAGGGCGATCACGT 114140 28 100.0 33 ............................ CCTGCAGCTGGCCGTCGAGCTGACGGATGCCGG C [114135] 114078 28 92.9 33 ............T.T............. TTCATCACGTGTGAGCGGATTTGGCTCTATCCT 114017 28 89.3 0 ............T......A.......T | ========== ====== ====== ====== ============================ ================================= ================== 10 28 97.5 33 GTCTTCCCCACACGCGTGGGGGTGTTTC # Left flank : TTAGCGTTGGCGAGCCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGACTCGACGGCGCAGCGCAGGATAACAGCCTCCAGCTACCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGACGACTTTCCGCTGCGCGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGCGGTAACTTCGCGAAGCCACGGAAGGCAAGCGCCAGGATGACGCGCTACGTTCTGGGGATGACAAAAGCGTTTTACCCCCGGCTGCGGGCCGGGCAGGCCAGTAGGGTAGACCGGTCCAGGTCAGCAGCAAATCGACGGTGGTTATATGGTGACATACTTTTTCGTTTGATGAATGTTGATGCTGATGCGGAAACCCTGCGGAGTGCAATTGTTGTAAATCTGGCGTTTTAATACGCCGCTAAACACAATATGCTGGT # Right flank : CGCCTTTCAAGTGACGACAAGTCACGTCTGTGCGCATTTCTCAGATGAAAGGGGATTCCTGACGTAGAGGCATCAATGCCGTGACATAGTTATCCTTAATGTACATCAATGTCTTCGAAATTTCGTTTGGCCAGCACAGTCTCATATGTTTTTTGTATGATTTTACTTATAAATATTCGTGAACTATGTTTGTCCTATACTTTCTTTAGGGGCATCTAAATCATTCGAGTTTATTACTCGTCTGGAGATATTGTTCTTCATATTAATTATTTATAGCTTTTTATATTATTATTTTTGGCTTTTATCTTTAATTCAGTGTGTTGTGGACATTTTTGATTTTATAAAAAGTTATTTATAAGTTTCCCGGTTTTTAGTATTAATAAAGGGCACATGTTTTTTAAGGAAAAATTCCATGAGGCGCTTGATCAGGGTTTCGCTACAAAATCAACATGCCATCGCGGCGATAAGTTTTGAAAACTGTCCAGCGAAAACCCGGATGT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACACGCGTGGGGGTGTTTC # Alternate repeat : GTCTTCCCCACACACGTGGGGGTGTTTC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //