Array 1 3242-33 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSED01000035.1 Aggregatibacter actinomycetemcomitans strain PN_563 35, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3241 28 100.0 32 ............................ AGCGTTTGATGATTTTGTCGTTTTTGTAAATT 3181 28 100.0 32 ............................ TCTTTTTTTTATTTAAGTATGTTTATTATAAT 3121 28 100.0 32 ............................ TAAAGCAGATGTACGAAAGATTCGTTTTATTT 3061 28 100.0 32 ............................ AATGTCACCTTTAATAAAAGATTCAATTACAG 3001 28 100.0 32 ............................ ATTGTGGGTCAGAACAAGTAAGTACTTCTCGG 2941 28 100.0 32 ............................ CTACTGCTTCACTTCAAAATCACAAAATCGCT 2881 28 100.0 32 ............................ GTAACGATTACGTGCTTGATGTTGTGTTATTT 2821 28 100.0 32 ............................ CTATATCAATTGGCGGCATGTAATTATCAAAT 2761 28 100.0 32 ............................ AACCATAAATTTTGGCAAAATCTATATTAAAT 2701 28 100.0 32 ............................ GGCCGCAATTGTAGGCATACATTATCGCAAAT 2641 28 100.0 32 ............................ TATTCGGCAGTGAAGTCAACCATGACGATAAA 2581 28 100.0 32 ............................ TAATCGGTCACGAATGTCGAAGAAAATTATGG 2521 28 100.0 32 ............................ TATCCGCTCTCTTTGATACAAATAATAACATT 2461 28 100.0 32 ............................ TTTTACTACACTTACCAGCGTTCCACCTTCTC 2401 28 100.0 32 ............................ TATATAAAATTTCAAACAGATTATTTAAATAA 2341 28 100.0 32 ............................ TTTACTTAATATTTACACAATTTTTATAAAAT 2281 28 100.0 32 ............................ TGCCATTTTTGTTATTTGTTGATGGCTGATAC 2221 28 100.0 32 ............................ AATGCCTGTTAGACCCAACAAAACAAAGTAAT 2161 28 100.0 32 ............................ TTGACGTTGCACTAATTGAGATGGCATGGAAA 2101 28 100.0 32 ............................ ATTAATGGCGGGATTTTTTTTGTCTGAACAAA 2041 28 100.0 32 ............................ TGCTCAAGCACCGGTTCAACAAGCAGTAGGTA 1981 28 100.0 32 ............................ TTATTATATATCGTGTAAAAAATGAACAAAAT 1921 28 100.0 32 ............................ TTACGATAATTTCGTATAAGAAGGAGCGCTAT 1861 28 100.0 32 ............................ AAATTCGCCCTGTATGGTTAAAAAACATTGAC 1801 28 100.0 32 ............................ AAACATCATGTGAATGAACTACCTGTCGTTTG 1741 28 100.0 32 ............................ CTACCTCTTCACTTGAAAATCAATAAATAGCC 1681 28 100.0 32 ............................ TTCCTGAAGGTGAAAATTCAGCGTAGGTATCA 1621 28 100.0 32 ............................ AAAAATGCAATTACGTAAAGTCTTACTAGATT 1561 28 100.0 32 ............................ TTATTGCAAACTGTACGCACCTGAAATGATGA 1501 28 100.0 32 ............................ TGCTATAGAATATGATGTAGCAAGTAGTGTAA 1441 28 100.0 32 ............................ GTGTTGATTTTCAAATAAAGGTTTCTAATAAA 1381 28 100.0 32 ............................ AATAACACGAACATTTGGATTTATTTTTAATA 1321 28 100.0 32 ............................ ATTGCTAAAAGACGGGACATAAAACAAAATAT 1261 28 100.0 32 ............................ TAAACAAGATTTCATTGTCAATGATTATAAAG 1201 28 100.0 32 ............................ TCCTGATATGGGTTTCGTTATTAACACAATTT 1141 28 100.0 32 ............................ AACAATAGAATTGATGTAAAAGATAAAACATC 1081 28 100.0 32 ............................ TTTAAGTCGTCAATTGATGGCAGAAATTTTAA 1021 28 100.0 32 ............................ TATATTTGTATCTCGCTCCTTTCCTGTTTCTT 961 28 100.0 32 ............................ AATAATTAGGATATGTCTCAATATCAAAATAT 901 28 100.0 32 ............................ ATAAACAAAAGATTCAAGAAAATCCAACAAAA 841 28 100.0 32 ............................ TGTCAAAATACCATTGCTAAAACACGGGACGT 781 28 100.0 32 ............................ TCATCTTATGGTAATAAAGACGTGGGTCAAAT 721 28 100.0 32 ............................ TGTAGATTGCCCACGCAATTCCATACTGCGAT 661 28 100.0 32 ............................ ATCGCTTTATTTCTATGTATGCTAGGACTTTT 601 28 100.0 32 ............................ TAACAGAAATAAGAAAAAAGCTGAAAGAATTA 541 28 100.0 32 ............................ TGCTAAAAATATAAAATTATTTGAATTATCTA 481 28 100.0 32 ............................ TAGTCTTTTAGTATTACCAGCAAAATCAAGCA 421 28 100.0 32 ............................ TATCTTTTCGAGTATATATGCTGTGGGCAAAC 361 28 100.0 32 ............................ AGCAAAATCAAGCACTAAGCAGTTTTCTTTAT 301 28 100.0 33 ............................ AAACCTCTGGATTATAGGAATAAAATACTTCGT 240 28 100.0 32 ............................ TTTTGATAGTGAAAAATTATTAATATTAGATA 180 28 100.0 32 ............................ TGGTACTGTCTATGAAGCGTTAGCAAAAGTTC 120 28 100.0 32 ............................ TATTTGTGCGTCTGATAATGAGCGCAAATCCA 60 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 54 28 100.0 32 CTTCACTGCCGAATAGGCAGCTTAGAAA # Left flank : CGCTCGCCCGTCGTAACGATGAAAATCCGGAAGTCACAGACCGTTTTGAACTCTTCATCGGCGGACGTGAAATCGGTAACGGCTTCTCAGAATTAAACGACGCCGAAGACCAAAACGACCGTTTCGACGCACAAGTCGCCGCCAAAGAAGCCGGTGATGACGAAGCGATGTTTAAAGATGAAGACTTCGTGATCGCACTCGAACACGGCTTACCACCAACAGCCGGCGAGGGCTTAGGCATCGACCGCTTGGCAATGCTCTACGCCAACGCGCCATCTATCCGTGATGTGATTTTATTCCCGGCAATGCGGCAGAAGTAGTTAGCACAACTATCAAGATAAAAGGAAGTCATTCGGCTTCCTTTTTAATTCCCCTTTATTTGCACAATAAAAAAATCCCCTTTAAAAACAGTATATTAAAAACACAATCTATAAAAAGGATTTTCACTTTAAAATACGCTAACAACTTGGTATATCAGCTATTTTCAGTTAGAATGCCTA # Right flank : AATAAAATAAATTGCTGTAACCATAAATTTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGAATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched CTTCACTGCCGAATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 3160-69 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSED01000058.1 Aggregatibacter actinomycetemcomitans strain PN_563 58, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3159 28 100.0 32 ............................ AAAATGATAACATTCTCAAGTTTTCTGCTCAT 3099 28 100.0 32 ............................ TGTTAGACCTAGCAACACGAAATAATTATTGA 3039 28 100.0 32 ............................ TTAAAGACGAAAACATTCCGGTATGGAATTGT 2979 28 100.0 32 ............................ TCTTTCTTAGGTTTCAGAAGTTGATAAGGAAC 2919 28 100.0 32 ............................ ACAATTAAAACTCCAATTTTGTGCCCTTTTAC 2859 28 100.0 32 ............................ AAAATGATAACATTCTCAAGTTTTCTGCTCAT 2799 28 100.0 32 ............................ AACGATATTACTGTCAATTTTTTTTGTTTCAC 2739 28 100.0 32 ............................ TATGACTTCTACAATTTGATTTTCAGATAAAA 2679 28 100.0 32 ............................ CACCTCGGGGTTCTCTGATTCAATTTTATGAA 2619 28 100.0 32 ............................ ATACAACCGGCAATTCTGTTTTATAAATTTTA 2559 28 100.0 32 ............................ AAAATAAAAAAAAATATTTTTCGTCCGATTTG 2499 28 100.0 32 ............................ TATAATGTATGCCCACGATGGCAGCTGGTACT 2439 28 100.0 32 ............................ TTGCCCTACTTGTGGAACAAAATTCTGTTGAA 2379 28 100.0 32 ............................ ATTCTTTGTTCTATGCTCATTGTAAATCACAT 2319 28 100.0 32 ............................ ATATAATTGTTCAGCATTATTTAAAGTACCGA 2259 28 100.0 32 ............................ TTTAGTAAAGGCGGTGCGCTTTATTCTGAACA 2199 28 100.0 32 ............................ TTTGCTAAGGTGCTTTTTCTTTTTCAGTTTCC 2139 28 100.0 32 ............................ ATGTGCGCCCCGCTGGTTCATCCCGATACTGC 2079 28 100.0 32 ............................ TTCAAAATTGGTTAGTCAACAAGGTGTAAAAG 2019 28 100.0 33 ............................ CAGAAATTGTAAATTGAATTTTTAAGAGTGAAC 1958 28 100.0 32 ............................ TGTGGATAACTATTCAACATTTTCGATCTAAA 1898 28 100.0 32 ............................ AACTTTTATTTATTTCGATGTCATTTTTCATC 1838 28 100.0 32 ............................ TGTAATATAAACATTTGTAAAAAATCCATTTT 1778 28 100.0 32 ............................ ACTAAAAGCTTAAAATAAATTAAGCTACCACC 1718 28 100.0 32 ............................ AAGAACATTAAAGAAGTGTCTGCTCCTGCTTT 1658 28 100.0 32 ............................ TACAATTAAAACTCCAATTTTGTGCCCTTTTA 1598 28 100.0 32 ............................ TGAATATTTAATAAAACAATTATTAATCTTAT 1538 28 100.0 32 ............................ TAACAAATCCTTTCGGCGTTTGATGAGTAAGT 1478 28 100.0 32 ............................ ATCGTCTAAAGAACTGTTAATATTGTTATCAC 1418 28 100.0 32 ............................ TGTTAGACCTAACAACACGAAATAATTATTGA 1358 28 100.0 32 ............................ TACGGCTAATCCATTCCCGACAGCACAACCGG 1298 28 100.0 32 ............................ AAGATGATAACATTTTGAACTTTTCTGTTCAT 1238 28 100.0 32 ............................ ACGGGCAAAAATATATCACCAGGGGGAGGGGT 1178 28 100.0 32 ............................ ATTCAAAATTCGCTTTGCTTGTGATATATCTT 1118 28 100.0 32 ............................ TAAATATTTCCCGCTATAATAGCGGGATTTTT 1058 28 100.0 32 ............................ TTTTCCAGATGGTGAAAATTCAGCATAAGTAT 998 28 100.0 32 ............................ TAGCATACCATAATACAAAAACTAATCATGGA 938 28 100.0 32 ............................ TAACATTTCATACAGATTCAAGAAACGTTGTT 878 28 100.0 32 ............................ TTTATATTAAAGCTGATTATCTTCTAAGAATT 818 28 100.0 32 ............................ TCTGAAATAGCTAATATTTCCACCAATAAAAG 758 28 100.0 32 ............................ AAAAGCGATCGCATGCTCCGCAACTGCAAAAA 698 28 100.0 32 ............................ AAGATGATAACATTCTGAACTTTTCTGTTCAT 638 28 100.0 33 ............................ ATTCTTCTACCAGTATTTGAACAATACCTTTTA 577 28 100.0 32 ............................ ATTGATCAACAATATTTTTCAATGTTTGATAT 517 28 100.0 32 ............................ ACCAATAAAAATTATCTTGCTTTGTAATATAA 457 28 100.0 33 ............................ CTCTATGCCGATAAATTGGAGTTCTTACACCCT 396 28 100.0 32 ............................ TATCATTAATACAGAGTTGAGCATTAATTCTT 336 28 100.0 32 ............................ TCTGCAATCAGCTTTTCGGTGCCGTAGGCTTG 276 28 100.0 32 ............................ ATTCAAATGCTGGAAGACGCTGAATTAATCAC 216 28 100.0 32 ............................ CTTACCATCACCTTTGCCATTGTTTGTTCCGG 156 28 96.4 32 .................T.......... GGCAGCGGTAAAAGTTATGAGGTGGTCCATTC 96 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 52 28 99.9 32 CTTCACTGCCGAATAGGCAGCTTAGAAA # Left flank : | # Right flank : AATACACGCTTTATGATACCGATTGCAAAGTGTAGTAATACACTAATCCCGCAGTCGTCAATAGGTGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGAATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched CTTCACTGCCGAATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 37087-36856 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSED01000007.1 Aggregatibacter actinomycetemcomitans strain PN_563 7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 37086 32 100.0 34 ................................ ATATTTTCAGGAACTTCCCATATTGTTACGTATC 37020 32 100.0 34 ................................ CGAAGACGCAGTGGAATCTCGTCGTTTTGAGCGT 36954 32 100.0 35 ................................ ATAGAAGTCAATTAATACACCAGACGGTCTAGGTA 36887 32 84.4 0 .T.....T.........A..A....C...... | ========== ====== ====== ====== ================================ =================================== ================== 4 32 96.1 35 GCAGCCACCTTCGGGTGGCTGTGTGTTGAAAT # Left flank : TTGATGAGGTGAAAAATGTTAATGTTGATTACCTATGATATTTCTTTAGAAGACCTGGAGGGACAAACCAGGTTGCGCCGTATTGCGAAGCATTGTCTGGATTATGGCGTACGGGCGCAATATTCGGTGTTTGAATGCGATGTAACGCCGGATCAATGGGTAAAATTGAAGGCTAAGCTACTGGCGACTTATGATCCGGATTGTGATAGTTTGCGATTTTATCACCTAGGCAGCAAATGGAGACGCAAAGTGGAACACCACGGGGCGAAACCGGCGGTGGATGTGTTTAAAGATGTGCTTGTTGTCTAGCTCGCTAACTCCTAGTTCTCATCAAATTCCCGTCAGGCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTTATATAGGGA # Right flank : TACTTGGCATGCGTTTTTTATGGGTATTTAACCGATTAAAAATATGTGAGCTTGTTGCCTAATGGTAGGGCAGCGTTTAACAAAATGCTCTGTGCGACTTCGATACTCGCCAAGCTCACGATTTATTGCCCTGCACGATTTTATACAATCCTTTTTCAATATTATTCAACATATCGGTAATTCAAAAAAACACCTTAAAAATCAACCGCATTTTTTCTCTCATAAAACAAAAGCTGAACCTTTCCGAAGATCCAGCTTTTCTTTTATCTATTTATTACGCTAATTCAGCGCGTAATTTTTTCGTGACGTCAACCATTACTTTCAGTTGTTCTAGGGTTTCTTTCCAACCGCGGGTTTTTAAACCACAGTCAGGGTTGACCCATAGGCGTTCTTTCGGCACCACTTGTAACGCTTTGCGTAGCAAGTGTTCGATTTCCGCGGCGGTTGGTACGCGTGGGCTGTGGATGTCGTACACGCCCGGGCCGATGTCGTTCGGGTAT # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCCACCTTCGGGTGGCTGTGTGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCAGCCACCTTCGGGTGGCTGTGTGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.70,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 38407-37977 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSED01000008.1 Aggregatibacter actinomycetemcomitans strain PN_563 8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 38406 33 97.0 32 ................................C CTGCGATAAACATAGTTTGTTCATGGTCGGCT 38341 33 100.0 34 ................................. ATAAATATTATGAATCACCGCTATAAAGACCCGA 38274 33 100.0 34 ................................. ACCGGGAGTTTGTGTAACAACTACAACAGCTTAG 38207 33 97.0 32 ................................T TGTAATCTTTTAGCTGGTGAATCTTTATCATT 38142 33 97.0 34 ................................T GTTCGCCTAGCTGATATGCGCAATTTAAAAAAAG 38075 33 100.0 33 ................................. CTACCGGCACCTGGAATTGGTTAGCCAATACCC 38009 33 81.8 0 .......T.....CA.....C...T......T. | ========== ====== ====== ====== ================================= ================================== ================== 7 33 96.1 33 GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACA # Left flank : GTTTTCCCATGCGCAAGCTGCAAAACACGCTCTATATCACCACTCAGGGCAGTTATCTGCATAAGTAGCGGGAAACGCTGGTGGTGGAGCAGGAAAGGAAGAAAGTGGCGCAACTGCCGGTGCATTCCATCGGGCATATTTTCTGTTTCGGTAATGTGGGTAAAATTGAAGGCTAAGCTACTGGCGACTTATGATCCGGATTGTGATAGTTTGCGATTTTATCATCTAGGTAGTAAATGGCGTCGCAAAATAGAACACCACGGGGCGAAACCGGCGGTGGATGTGTTTAAAGATGTGCTTGTTGTCTAGCTCGCTAACCCTGAGTTCTCATCAAATTCCTGTTAGGCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTTATTTGTATAACGAAGATATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATGCAGTAAGTAATCTCCTGATTTTCCTTGTTTTTTCAGATAGGGA # Right flank : GGCGCTTTGTTACATCTGAACTCTGACACCAACTAAACTAAGCACCTTATAAAAATAAGGTGTTTTTCTTTTCCCGCAAACCAACACAAAACTCCTTGCCCTTCCTCCGCAAAATATATAGACTGAAGCCCGTTATTAGTCGGGGTGCTTTGTGCTGAGATGATACCCGTGAACCTGATACAGTTAATACTGACGTAGGAAACTAACAGAAATCATATTTCCTTTCTTTTTCTCTTCATCGTCATTATTGCTGATTATCTTTTTTTCGTTAAAAAAAGAAAAATTATGCAATATGGTTTTTGTTGTCCGTTATTTGTAAATAACGGAGGGCGTGATGAGTAAGGTTGCGCAAGCGTTGACCATCGCCGGTTCGGACAGCGGCGGCGGTGCCCGGGTTCAGGCGGATTTGAAGATGTTCCAAATGCACAGGATGTCATTTGGTACATCGGTGGCCGCGCAAAATACCTTGAACGTGGTTGATATTTACGCCGTGTCACTCA # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.70,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //