Array 1 9927-10152 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTSO01000017.1 Bacillus cereus strain AFS020204 AFS020204_110_E4_Contig17_140523, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 9927 29 100.0 37 ............................. GCTGTATTATCTTTAACTTCTTTCTTCTCTAAATCTG 9993 29 100.0 36 ............................. ACATACGGTGATAAAACTACATCGTATCAGGTATAG 10058 29 100.0 37 ............................. GAATACTCTCACTAGGAGGTGTTGTGACGTTATGACG 10124 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 4 29 100.0 37 TTTAAATACATCTTATGTTTCTGTTCAAC # Left flank : ATATAGGGAAATACCTATCAACGTTTTGAAAAAAAAGACAAAAAAAGCGACGAAAAACGAAAAGAACCACCCAACGCCGCAAACGTACTTGGTGGTTCAATAAAAAATAACTAAATTTTTAGTAACCAACCACCTTGCGGTAGCTGTTACATAAGGCGAAGTGTTACCAGCACTTCGTCTTCTTTAGTTTATGCAAAAACTATTGTTATAATACTTCTACACATATTATAACATCAACTATAGTACATGTCATGCAGATTTGTTCACTATAGTTGGTAAAAGAGACCAAATTATTATCAAAACGAAATCAATTTTGTTCCTGTCTCAAAATACTTTGCAGGAGCATAGATTTTCCTACTCTTAATTCCCCTTTCTATGAAAAAACTTCTCTCTTTAAAAATTTTCCTTTAGCTTATCTATTGAGTTACTCGAAATCAATTCTAATTTAAGAATTTTGTTCAACAAGTTACGTACTTACGGTAAAATCAATAGACCAAAAT # Right flank : CACCGATTAAATCAACTTTTTATTACCTTCATATTTTATATAATACTATACTGCATATGAGTTTAGTGATTTTTTTACCAGCAGTTCATAAAAAAAATAAAATTCTCAAAAAGAAATAGTATAAGTCTTGAATTAACAAAGTTTATTAGATTCCCACTATCATTTCACTTGGTAAATTCACAAAAATAGGAGATCGCTATTATTTCTATACCCTATTTCAATCTCATCAAAGCTATATTCATTTAGCATTTTGATAATAGTAACTAAGTCTTCCCCCTCATTTATAATATTCCTAATTTCCTTTTCCATTTTTAATAAATTTGAGGGAGTAATCCCCCCCCCTAAAAGTAGATTTTTGATAATGATTTAAATATTTTTTACAGATTTTAAAAACTTTCGTCACTCGTTTCTCATTTACATCATAAAAAACAAACGCATAATTAGCATTCATTTGATTTTTCATTATTTTTTCTCCTTTAGATTAAATGGAATAAAAGAAT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTAAATACATCTTATGTTTCTGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 20021-19330 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTSO01000017.1 Bacillus cereus strain AFS020204 AFS020204_110_E4_Contig17_140523, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 20020 30 100.0 36 .............................. ATTGCCTTAACTGTAAAGCTATATTCTTCAGCTTCT 19954 30 100.0 35 .............................. GGTAAATCGGGCAAATTGTCCATTGGGTCTTTTAT 19889 30 96.7 35 .....................C........ CTTGCTACACTTTCCAATAACCATGTCGGAATCCA 19824 30 96.7 37 .........A.................... TTTCAATTAGTCGTTTGTGATAAATGATTGCAAGTGC 19757 30 100.0 36 .............................. ATAAGTACAACGTCAAACTCTGTATATTCCCTTCTA 19691 30 100.0 37 .............................. CAAATGGTGGCTACCCGTGAAGGGTTTGAAATATGGT 19624 30 96.7 37 .........A.................... TGCTCTAAGACTACTGCATTCCCATACCCTCCAAATC 19557 30 93.3 36 ...A.....A.................... ATTTTATCTTCTAATGGTTTTCGTGGTCTTGGCATT 19491 30 93.3 36 .........A......A............. AAAGAAAAGGCAATGTGTGGTGCAACGAGTGTAAAA 19425 30 90.0 36 ......T..A......A............. TACAAATCTTATCATAACGTATGATTTAAAGAATTT 19359 30 76.7 0 A.....T.GA......A......A.....A | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 94.9 36 GTTGAACAATAACATATGATGTATTTAAAC # Left flank : AAAAGTATATAATCCTTCTTAAACTAGTAGCTGAATGGATAATCCAAAGGTACATCCCTTAATGGGGATGTGCCTTTTTTCGTAGAAAGGGGAATTATTAATGGATAAAAAGAAAAAACAACGTGTTAGACGTGTAATTATTATAGGGATTGTCGCAATGATTTTATTGATATACAGTGGGAACGAATTTCAGGAGAAGAATGGAAGAATCTATGCTCCTGCAAAGTATTTCGAGACGGGAACAAAATTAGTTTCATTTTAATCTTTTTCATATTTTCATCGAACAATATGGGGTAATACGGAAGTTGCCGAACGTTTTACCAGATTATTTACCAACCTAATTAATTGGTGATAACATGTAAATGTAGATAAAGTAAGGAAATTCTGCATAAATTATAAGTGAATGAGATTTATATCAATTAGCTGGTAAAAAACTTATAAACCCACGTTTCTATAGTATAATAGTGGATACAGGAAATAAAGAGCCAGTATTATTCGGT # Right flank : GCTAAAAAATGTTATTGGTTTAGGAAGTAATATGGTTAAATAATAAAGTAGAAAGTATTATAATTTCGAAATAAAAAGCACACTCTTGATTTGAACTGCCCCCTATAAAATAGGCAGTTTAATAAGAGTTGTGCTTTTTTATTTAAAACGGAAATATAAGGTGGGGAGGATAGAGTGCTGAATGAGCTCAGTATAATTTAATTGTTTACATTTTTGTAAAATAAATAAATCGTATTATTTATTATAATATGATATCCTATTTTTAGGAGGTGTGAAAATTTGAATTTTGAGTTAATAGTTACAACTTTATTGAAAGAAGATCTTCACTATGAGGATAGTTTGCAATTAATTGGTAGTTTCATAAACAAAGTGATGCTTCAAAGTGAAAAATTAAAAGCCTTGCATGAAAGAAAAGGTTATAAAAATTATGTTTTTAGCAATTTTTATCCATTTGAAAAAGATAAAATATACAAAAGTGGCCGAGTGTATGTATTTCGATT # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATATGATGTATTTAAAC # Alternate repeat : GTTGAACAAAAACATATGATGTATTTAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [14-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //