Array 1 436146-435058 **** Predicted by CRISPRDetect 2.4 *** >NZ_QYUR01000002.1 Pseudomonas sp. K1S02-6 Segkk1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 436145 32 96.9 32 ...................T............ TGCTGCGCGTTGAGCTGGGTCTGCTGGCCGAA 436081 32 96.9 34 ...................T............ TTCTCCAGGGCGCGGCGGATCACCTGCGCCGAGG 436015 32 100.0 35 ................................ CAGGTATTTGATCTACATAACGAGGCGACCAGCCG 435948 32 100.0 33 ................................ TGGCTACCCGAGGAAGGTATTGCGGATAAAAGC 435883 32 93.8 34 ..........G..G.................. CCCCACCTTCGGCGCTGGAGCGGCGGCGAGCATG 435817 32 87.5 35 .........TG..G.......T.......... CGGGACGAGGTCGACTTTTGCAACCAGCGCGTGCT 435750 32 90.6 35 .......T.T.T.................... TTCGATGGCGTCAACACCACGCTGATCCCGTATAA 435683 32 96.9 34 .................T.............. CTCGGGCGTCTAGCCCTCATGTGATAGCCGGTAA 435617 32 93.8 33 .............G.......A.......... GCCCAAGGCCGGATCAACCCGGTGCTGGAGGAT 435552 32 100.0 35 ................................ ATGCAGGTGTTCCAAGAGATTGGCGAGAAGCGCAA 435485 32 100.0 33 ................................ AGGTAAGTACCGTCGGCCAGGTAGAAGCCTTGA 435420 32 93.8 35 .............T.............A.... GGCGGGTCTTGGTAGTTGGTATCCGGCGTATAGGT 435353 32 93.8 34 .............G..A............... GGGTAATCGATGCCATGATCGCGGCACAGGCGGT 435287 32 93.8 33 ............AG.................. ACACCACAGCAGCGAGTCCATCAGCCCAGCGGG 435222 32 90.6 35 ............CG.......T.......... CGGGACGAGGTCGACTTTTGCAACCAGCGCGTGAT 435155 32 96.9 34 .........T...................... TTGCAGCTCAGGAGTCAGGACTTTGGTCTCACAC 435089 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 17 32 95.6 34 GTCGCGCCCCACGCGGGCGCGCGGATTGAAAC # Left flank : GTTCAAACACGAACATCCCATGGGCAATGCACCGGCCCATGTGTTGTTCGATACGGTGAAGGTCGAGCGTGTACAGGGCGAAGCCGCTACGCCGGCCCGCAGCTTCGGCGATTACCGGGTGTCGATCGACAGTGAATCCCTGCCGCAAGGCGTCAGCGTACGTGAGTTGATCTGAAGAGAGGCGGGCATGGACGACGATGACCTAATTCCACTGTCCGCCTTGCAGCATGCCTCTACTACTTAGGCAAAAACTGGCAAAGCAAAGCCGAGCATATCGGCACAAAGGCGGTGCTGGATCTCAATGGCCCGCTAATTCCCTTGTTTTTTGCGAACCACAAGCGACCGGCTAAAACCTGGTGGGTTCGCGGTTCTTTAACAAATTGATTTGACTGGATTTAATTTTATTGAGGAGCAACTGCAACTTCCGCTTGCGGCAGTAAGCTGCGGTTCGCAAACCAGAAGAGTTTTCCTCATGGCGATCGCTGAGTTATAAGGGCGAG # Right flank : TAAGTGCGTCGAGCCCGAGGTTGGCCAATGCGGCGACAAGCAGAAGTACTTCAATCCGTTTCGGGCAGTGGCTTCGATGCAGGTTCAACCCAATGCCCAAGTACTCGCTTTTCACATCCCGAAAGCCTTCTTCGATCTGCATCCGCTGTTTGTATATCGCGACGATTTTCGCCGGATTCCAGTGCTGCTCCGGCAGGTTGCTGGCAAGCGACCAGGGCTCGCGCTCACGGTTGGCTGATTGTCGGCTGAGTTTGTTTTTGGCGATTGAGCCGGTTACACGTTGATGTTTTCTGCCCTTGGCAGGATGTCTGACGCAGTACAAATGGATGAAGTGAGGGGTGCTCTGGGTCATCTCGATACACCCCAGCGATTTAGGCGAGGCTGACGCGAGAGCGTATAGATTTTTCACCGGCAACCACGTTTGCGAGGCACTGCGATAAAGGTCTCGATTGCGGACCCGCCCCACGTAATGCCAGCCCTGCGCCTCGACCGCCTTGATC # Questionable array : NO Score: 8.48 # Score Detail : 1:0, 2:3, 3:3, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGCGGGCGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.50,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [10-9] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //