Array 1 88328-86597 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENQR010000005.1 Clostridium perfringens strain CHD28124R CHD28124R_seq5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 88327 30 100.0 35 .............................. GAATATAAGTGGTATATAGCTCCTTTTTCTCCACC 88262 30 100.0 35 .............................. GACTTAACAACAGATTCATTATCAGCCTTAGGATT 88197 30 100.0 36 .............................. AATACATGTTCGTAACCCATTTCTAGCGGACAGTTT 88131 30 100.0 36 .............................. AAATATGGATGCTTCTTTTGAAATTGATTTAAATAA 88065 30 100.0 36 .............................. ATAAAGATGAATTTTATATGCTTAAATTTATAAATT 87999 30 100.0 34 .............................. GTATCCAAGATTACAGCTTGAAAAAATTGAGTTA 87935 30 100.0 36 .............................. TCTTATTTCCTTTAGTAGCTATCTCAAATCCTTCTT 87869 30 100.0 35 .............................. GATCTTAGAAGAGATGTTGAGTTTTTAATTTCTTC 87804 30 100.0 37 .............................. TCCTTATTTCTAAGTTCTTCTAGTTTCTTGCAATATC 87737 30 100.0 36 .............................. TGAATACTTAGACCAGGAAGATGATTTTGAAGATGA 87671 30 100.0 35 .............................. GTAGGATTAAGGTTTGATATTGATTTGCCTAATAC 87606 30 100.0 35 .............................. TAAATAACAGAACTGTTTTTACCACTTTGTCCAAA 87541 30 100.0 35 .............................. AATATAGTGTTTACAATTCTTACGTAACTTTCAAC 87476 30 100.0 35 .............................. GCACCATCTACTGGCTTAGAAATTGGAGGATTATC 87411 30 100.0 35 .............................. TCGAATAAATCTGGGTTACTTTTTTGTATCGCAGA 87346 30 100.0 35 .............................. CGTGAAACATATACATGTTAGAGCCTTTGGTTTCG 87281 30 100.0 35 .............................. TTTTATATAATTTAAATCAATTACATTTATTATTT 87216 30 100.0 36 .............................. GAATTAGTTTTTGTTAATACATACGACAATGAATAC 87150 30 100.0 35 .............................. GCACCATCTACTGGCTTAGAAATTGGAGGATTATC 87085 30 100.0 36 .............................. AATGTAAATTCTTTTTCAACACTCTTATTCAATCCA 87019 30 100.0 36 .............................. TAGTCATTTATCTTAGGGCTATCAATGAAGCGAGGG 86953 30 100.0 36 .............................. CAGATTAAAAGCAAATGAATTTGGATATGAAGAGTT 86887 30 100.0 35 .............................. AAAATAACTATCATGGTTAAAGATATGAAAAAGGC 86822 30 100.0 34 .............................. ATATAAAGAGAGTTTAAAAAAAGAATATGATAAT 86758 30 100.0 36 .............................. AAGATAGTTGGGTAACTGTAACTGATACTGTAAATG 86692 30 100.0 36 .............................. GACCATGCACCTATTATTCTTTCACCTATTCTAAAA 86626 30 96.7 0 .................G............ | ========== ====== ====== ====== ============================== ===================================== ================== 27 30 99.9 35 ATTGAACCTTAACATGATATGTATTTAAAT # Left flank : GTAAGATATGAAAAGTAAAATGAATTATAATTATGCTTTTGTATTTTATGATGTAAATGAAAAGAGGGTAAATAGGGTGTTTAAAGTTTGTAAGAAGTATTTATCTCATTTTCAAAAATCAGTTTTCAGGGGAGAAATAACCCCTGCTAATCTTATAAACTTAAGAAAGGATTTAAATAAAGTAATAGAAAAAGATGAAGACTTCATATGTATTGTTAAATTATTAAACGGAAATGTATTTGGAGAAGAAGTGCTAGGAATTCAAGAAGTAATTAACGGAGAAACACTGATACTTTAATAATTAATTCAAAATAACATATAATTTTACCAGTGATTTAAGTGGAAAAAAGTTTGCGAAACCCTTGAAATAACTAAGTTTTAGGCTGATTTTCGATACCCTCTTTAATTCTTAATAAAACACTGGTAAAATTATAGTATAAGTATTGAAATAATTAGATTAAGATATATTTATTAAATTTAAAAATGGCTATTTTACAAGG # Right flank : ATTAATACTGAATTCACTAAAAATTAAGTAACTAATTTATATTGTTTTTCAGTATAATATAATTACTTAATGTCTTTCTATATAAAGTTTTATAATTAAGTAGGGGTATAATATGAAAAAACTAGCTTTTATTATAAAAAATATTTTGAAATTCTGGTGGTGGCAAGATATAGAAAAGTCTAATATTTTTATAAGGGTTATGAATATTGGAATGGCTTTATTTTTAAGCTTTTGTCTCTTAGCATGGATGTATGGAGAAAGCTTTAATATTATATTAAGATCATTTATAAGTATTTATGGAGTTCTATGTTTCATGTCTTTTTGGCCAGTTTCATATTTATTTGATGAAAAGGATAAAGTAAAAGGAAGTACATTTTACATATTTCAAAATATTTCAGTATTTTTCTCTATTATTATATTAGTTGTTTATATACTAAAGAATTATGATAGAGTTAAAAGCTATTAATATAATTAAAAGTAATATAATTTAAAAAATATAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACCTTAACATGATATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [85.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //