Array 1 2464582-2466814 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTBP01000001.1 Actinomadura rubteroloni strain RB29 Contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 2464582 37 100.0 35 ..................................... GTGGTGCCGTAGTCGCAGCCCAACCCGATCCACCT 2464654 37 100.0 35 ..................................... GAGTCGATCCGCGACACGCGCGGCATCCCGTACGA 2464726 37 100.0 37 ..................................... TTCGAGCCACTGCGCCACGGGCCAGGCGTCCCGGGTC 2464800 37 100.0 38 ..................................... TCGGTGGACCGCTGGAGCGGCTGCGCGCCGGCGCGGGC 2464875 37 100.0 36 ..................................... TGGACGACCGACGGCTACCGGGGCCACTACGCCTAG 2464948 37 100.0 35 ..................................... CGGCTGATCGGGACCTCTTGCACGTGCGAGCCGGT 2465020 37 100.0 36 ..................................... CTTGTTCTTGTGCTCGCGGAGCCGCCCGTCCTTGCG 2465093 37 100.0 37 ..................................... TGGTTGAAGTGCGCCCCGAACGCGACCGCGAGCTGCA 2465167 37 100.0 34 ..................................... TTCGGTCTCATGGGCGACCCCGGCGTCTTGGCGC 2465238 37 100.0 35 ..................................... CTCGCGCTGGCCGTCGCCGCGACCGGCGAGCGTGT 2465310 37 100.0 36 ..................................... GCCGCCGCGGGCCCGGCCATGGAGATCCTGCGCCGA 2465383 37 100.0 35 ..................................... CACGCCCCCGAGGTCAGGCCCGAGCAGTCCAGCCC 2465455 37 100.0 38 ..................................... GAGCTCATGGGCTCCCCGGAAGCGCTCGCCGCAGCCGT 2465530 37 100.0 36 ..................................... AGCCTCCACGACAGCAGCCGCGTCATGCTCGCCGTC 2465603 37 100.0 37 ..................................... GACTGGAACGGCTCTGACTCCATCGGGGCTATCGACC 2465677 37 100.0 36 ..................................... GTCGTTCACCCTGTGAAGGTTCCGGATCACGTCGTT 2465750 37 100.0 37 ..................................... TCGGCGATCTCGCGCAGGATACGCGAGCACTCGTAAA 2465824 37 100.0 35 ..................................... TTGGGTGAGCGGGGGCAGCAGGATGTCGCCGACGA 2465896 37 100.0 37 ..................................... TACTTCCGGTACCGGTCCGGCCGTGCCCGCCTCGGCA 2465970 37 100.0 37 ..................................... ACCGCCTACGTCCGCGTCCTGGGCCGCCGTCTCGCGC 2466044 37 100.0 38 ..................................... AGCCGCTCGTGGGGCTCCATCGTGGTGTCCTCTCCCGG 2466119 37 100.0 37 ..................................... CTGGCGACCTCGCTCCTGGAGGCGCACGACCTCGCCC 2466193 37 100.0 36 ..................................... CTCCCGTGACCGCCGACACCATCCGGCGCGCCGTCG 2466266 37 100.0 38 ..................................... TGCCCGTCCCGCCACGCCTGCCCGAGCGCGCCCATGAG 2466341 37 100.0 35 ..................................... GGGGCCGGTGGCGATCACGTGGTGCGCGCTGCGGT 2466413 37 100.0 35 ..................................... CGCATCACCGACTCCGGAGCCGCCCGCAACCGGGC 2466485 37 100.0 35 ..................................... ATGCGCGGCGCCGACGGGATGGGGATTGCCAAGGG 2466557 37 100.0 38 ..................................... TAGGATGTGGTCTACTACGTTGGCTCCATCTTCCCCAC 2466632 37 100.0 36 ..................................... GGCGGCACCGCCAACTACATGATGCTCCGCTCTCAG 2466705 37 94.6 34 .................T..................G AGGTTCAGGAGCCGCGTTCGCGCCAGCGTCAGCG 2466776 37 83.8 0 ....A.................GA......CT..G.. | T,T [2466793,2466795] ========== ====== ====== ====== ===================================== ====================================== ================== 31 37 99.3 36 GTGGCGCCCGCCTTCACCGGCGAGCGAGGATCGCAAC # Left flank : TCCTTCCAGCTGTCCAGGCACGCATCCTCGCGCGCCACATCCGCGGCGAACTCCCCGACTACATGCCCTGGATGATCTGATGGAACTTCTACTCACCTACGACGTCAGCACCATCGACCCACCCGGAAGAAACCGCCTGCGCCGAGTAGCGAAACTGTGCGAAGGCTACGGAATGCGCGTCCAAAAGTCGGTCTTCGAGATCGTCTGCAGCGACGCCGACCTCCTCGTCCTCCTGGACAAGGTCCAACGGATCATCGACCATGACCAGGACAGCATCCGGATCTACCGCGTTCCCAAGGGCTCTCTCAGAGACGTGAAGACGCTCGGCACGGCCGCACCTCTACCGCACGACGACGCGCTCATCCTGTAGTTCGGAACCCCAAGCGCCCACAGAACCCCCGGCAGGTTCCCAATGAGATTTAGGCGAAAGACGCATACTTCGTCCGATTCAACAAGCCGTACCCGTCAACACACAGCGTAATAACGGCAGGTCAATTGCT # Right flank : CGTTGCGCCGCTGGTGATCGCGTTGGCGGGTGAGGCTCGTGGCCGCTGACGAGGGTTTTTGGTCGGGTGCGGTGGCAGAAACCGGATTGTGGCTTCGCCACCGCAGCCCGGGGGTGCCTTGATGGATCGGTCGTGTCTCGGTTTGTTGGTTGCGCGTAGTTAGTCGGCGTTGAGGATGTTGATTGCGGCGTGCTTGTCGCCGTTGAAGTAGTCGCGGACGACGCTGTGGAGTACGGCTCGGGCTCGGCCGGACGGGATGGGGTCGGAGACCTTGGCCGGGGTGCTGGTGTCGGGGCCGCCGGCGGTCGTGTCGTGGGCGTTGCCGAGCTGGAGGAGGTTATGGATCTCGGTGGCGTGGTAGCGGCGGTGGCCGGACGGAAGGGTGATCGGGTGCAGGGTTCCGGTCTTGGCCCAGCGGGTCACGGTTTTGGGGTCCACGCGAAAGAACTGCGCCACTTCGGACGGCGTGTAGAGGGTGGGCTGCTGTTCGTTCTTCTCGT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGCCCGCCTTCACCGGCGAGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-14.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 2470091-2471668 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTBP01000001.1 Actinomadura rubteroloni strain RB29 Contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 2470091 37 100.0 39 ..................................... GTGCGATACCCGGACGCGGTCGGTCACTGACTCGGGCAG 2470167 37 100.0 38 ..................................... TGCGACAGCGTGAGGAAGTCGGTTCCGGCCATCTCGTC 2470242 37 100.0 37 ..................................... GCCGTACGCGCCTTGAGCGAGACCGCCAGGGGGTCAG 2470316 37 100.0 35 ..................................... GGGGTCGAGGTGGGCGCGGCGATCTGGCGACGGAG 2470388 37 100.0 36 ..................................... CCGCACTGGGCACCGCTGATCGAGGGTGTCGCCGAC 2470461 37 100.0 37 ..................................... ATCAACGACGACCTGGGGGCGCTCCGCGACCTCCCGA 2470535 37 100.0 38 ..................................... GTTCCGTGGGTCGACCACTCGAAGGACGCTTCGCCCAG 2470610 37 100.0 35 ..................................... GCCGCCGACGGGATGGGGATCGCCAAGGGCCGCGC 2470682 37 100.0 36 ..................................... GCCCGGTCTGTGATCGACCCGCCGCGCGCCCGGGCG 2470755 37 100.0 36 ..................................... GCTATGGCCAGTGATCGCGCTTCGCAGATCGGACGG 2470828 37 100.0 35 ..................................... TGGTGCAGCAACATCATGTCGATGCCCAAGCTCCG 2470900 37 100.0 35 ..................................... GCGCTTCCCGTGGCGTCGCGTGGCATTGTGTGGCT 2470972 37 100.0 35 ..................................... CCCTCATGCCAGCGCCGGTTGAACGGGTCGAGGAA 2471044 37 100.0 35 ..................................... AGCCCGTACCACGCGACGACCTGACGTCCGTACCG 2471116 37 100.0 37 ..................................... GGGTCATTGACGTCCGCGCGGAACGTCGTCTCAACCG 2471190 37 100.0 39 ..................................... ACGGCCGTGGCCGCGGTGACGCGGACCCGCAGGAAGCGG 2471266 37 100.0 36 ..................................... CTCTGGTCATCGGGCAGGTAGGGCTCTCGGTCCTCT 2471339 37 100.0 36 ..................................... GACGCGACCGTCTACCCGCAAGCCTGAGCACGAGGA 2471412 37 100.0 37 ..................................... GTCTGCGCGGCGCGCTTGGCGTACAGCTCGCGCACGC 2471486 37 97.3 35 .................C................... CTGCGGTTCGCTCCGCTGGCCGGCGGGACGGGCGG 2471558 37 97.3 37 ............................A........ AACCTCATCGCCAAGGACAAGGCGTCCGCCGCGATGG 2471632 37 91.9 0 ..............T...............C....G. | ========== ====== ====== ====== ===================================== ======================================= ================== 22 37 99.4 36 GTGGCGCCCGCCTTCGCTGGCGGGCGAGGATCGCAAC # Left flank : AGGCCGGAGACTTCGACTTCGGCTAGCTCCCCCCGACGCCCCGCCCTCAGCGGTCTGGCTCGCGAACCGGGCGTCGTCCACCTCCGATGCATCGTCCCCACGAAAGGTCCCAGTTCTGATACTGGGGCCTTCGTGCTTCCGGGTGGAAGTCACGCTACCGCCACAACGTGCTTCCCGTACGTTCTAAGGCGGAAATTCCAGGCAGAAGACTCAGCGATGGTCACTTGGCGAGGTCGCAAAGTCGAGTCGTCTCCGGTCGCCCGGGCGCGCGCGGCCAGGCAAGCACAGTGGCCCCAATCGCGGGCGAGCCGCACGCCACAGCATTACCGTGGGCAGATGCTCGCTGGCGACCTCCCACGACGCCGGACACTTCGGAACCTCAAGTGGTCGCCGAATCGCCGGGAGGTCTCGAACTACTTTTGGGCATCTGTGGGCATCAGTGTCCCTTTCAATGTCGTAGGCAACCAAGCTCAGTGGGTAATGTCCCCAGCTCAATTGCC # Right flank : CCGCCTGTCCGTCCGTGACCGCCCCGACACCGGCACAGGAGCTGACCGCTCGGCGCGGCCTCTCAAGGCTGCGCGCAGGGTGAGAAATAGAAAGGGGCGATCGGGTCCGCGACGGGCCGGATGATCGAGTAGGCACGGTGAAAGACGAAAGCCCAGGCGGGGGAGTGTACCTAGCCTGGGCTTTTTTGATTGGAGCGGGCGACGGGAATCGAACCCGCGTAGCCAGTTTGGAAGACTGGGGCTCTACCATTGAGCTACGCCCGCGTGCGGCGCGACGGGTGGTCGGTCGCCGTATGTAGGGTACAGGGTTTCGTGGGTGGGCGTGATCAGGGGTGGACTACCGCTACGGGGCAGGCTGAGCGGTGGAGCATCGCGTTTGCCACTGAGCCTAGGAGTAGGCCCTTGAAGCCTCCTCGGCCTCGGGAGCCCACTACCAGCAGGTCTGCTTGGGTTGAGGCGTTGGTCAGGGCTCTTACGGGGCGGGTCTGGGTTGCGTCGGG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGCCCGCCTTCGCTGGCGGGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-17.20,-16.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 1416394-1415177 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTBP01000002.1 Actinomadura rubteroloni strain RB29 Contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 1416393 37 100.0 35 ..................................... TGTGCGCGGTCTACGAAGGCACGAACGAGGAAGTC 1416321 37 100.0 35 ..................................... CCGACCTGGCCAGCGCTGCGACGGCCCGCACGAAC 1416249 37 100.0 35 ..................................... TCGCGCACCGCGACGCGCTGGACGAGATCGCCCGG 1416177 37 100.0 37 ..................................... CCCTGATGACACCGGGCGTCGCCCGGCACGGCGACGC 1416103 37 100.0 38 ..................................... TTGCAGAAGCCGCCGCACGCTACGTCGTCGATCATCTG 1416028 37 100.0 38 ..................................... TGATGATGGGATTGTGCGCCCATACCGCAATGGCCCAC 1415953 37 97.3 38 .................................A... GCGATGGCGCAAGCGCCACCCTTGACAGAACCGTCCGG 1415878 37 100.0 34 ..................................... TTTCGCGGCCGGATGGCTGGCGGGGCGCGGCGAA 1415807 37 100.0 38 ..................................... GCCCAGCCGATGAACGCGGCGTCTTCGGCGGCGCGCTG 1415732 37 100.0 36 ..................................... TCCATCGCCTCGTCGGCCAGCGCCCGGGACTTGGTC 1415659 37 100.0 39 ..................................... CACGCCCGGCGGGCCTGGGTGGACAGGTCCTTGATCCGC 1415583 37 97.3 39 .............A....................... ATGTCGGGCGAGGACGAGGCTCCCACCACCGCGCAGGTC 1415507 37 97.3 34 .....................T............... GCCGGGCCAGGGGCGGGTGGCGGCCAGGTCGCAG 1415436 37 94.6 37 .............A....T.................. GGCGGCCGAACGTGGACGTGGTGGGCGTACGTTGGCG 1415362 37 94.6 37 ............TA....................... GCCAACGCGCCGAAGCGGACGCAGCGCACCGAGGGCT G [1415342] 1415287 37 97.3 37 .............A....................... ACGTCACCCACACGCCGCACCGCACGGGCTGCGGGAG 1415213 37 91.9 0 ...............G.G............G...... | ========== ====== ====== ====== ===================================== ======================================= ================== 17 37 98.3 37 GTCGCACCGGCCGCACCAGGCCGGTCACCGTTGGAGG # Left flank : CGCCCCAGTCGCAACCCCGAGCACGTCCGGAAACCCGGATTCGGCGACGACCCGCTGATACGGATACGGCCCATCACCACCTCCGAACGCACGACGGACAAAAGCGGCAAAATCCTCAGTCATTGCCTAAGTCCCCGTTCCTTGACCGCTGCCGACACCCTGCCACCCGCCACCGACAATTCTTCGAGGTCCCGAAGGTTGGCCGGAACTGACCACCCAATGAGATTGGATAAAACTAATAATCCCGACAAAACAAACAAAATGTGCAACTCTCGGCTGGGTCGGTCGCGACGATCGCGAGCGCATCGGATAGCGTCCGGTGCCAGTCCGCGAAAGCCCCAGCGGGCTGTCGGTGGCGTCAGCCGGCTCGGTTCGGAACCCCGAGCACCCATAAAATCGCCGGGAGGTTCCGAGGTGCATCAGTGCACTCAACGGGACAATATGGACAACAATCGAGTCCGCTTTCAAAGACCCTCGGCAATAACCGCAGGTCACGCGGC # Right flank : GTTGGGCGAACTGTTTGGGCCGAGCCACATCGCCCGGATCGCGCCGGCCGCAGTGGCCTTGGCGGCGCGCAGCTGTTCTCGCGGGTGGTGCCGCTGACCGCGCGTGTGCGGAACGCCTCGCGTGGCTGGGTGGCGTTCGCTGAGTGGGTCAGGTTGTGGCGGGGGTGGGGGTGCGGTGGGGGGCTGGGTGCGGTGGGGCTGGGACGGGTGGGAAGGTCACTGTGATCGTCAGGCCGCCGGTCGGGCCGGGGACGGTCGTGATGGCCGCGTCGTGGGCTTGGGCGATTGCCTGGACGATCGAGAGGCCTAGGCCCAGGCCGTCGCGGCGGGCCGTGCGGGTGTCGTTGAGGCGCTGGAACGGTTGGAAGAGGCGTTCCACCTCGTCCGCCGGGACGTCGGGGCCGGTGTTGGACACGGTGACGTGGGCGTTGCCCGATGGGTCGGTGCCTGTTGTTATGTGCAGGCGGCCGTCGGGGATGTTGTGGCGCAGCGCGTTGTCC # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCGGCCGCACCAGGCCGGTCACCGTTGGAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-14.10,-14.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 2 1424187-1425610 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTBP01000002.1 Actinomadura rubteroloni strain RB29 Contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 1424187 37 100.0 35 ..................................... AGCTCGAAGGCGGCGAGCCTGACGGTGCGGTGGGC 1424259 37 100.0 35 ..................................... GTGTATCTCGCGCGCGGGCGCCCGGGGGCTACCGC 1424331 37 100.0 39 ..................................... GAGTCCCCGTGGCTGACACTCGCCCCTCCGCACGCGCCC 1424407 37 100.0 37 ..................................... CTCTTCACCGAGGCGCGGACGGTGAGGATGTTCGGCA 1424481 37 100.0 35 ..................................... GATGACAAGACCAGCCGCGCCACCTTCGGGGACTG 1424553 37 100.0 36 ..................................... GGCCCACATCGCGATGCAGGCTGCCTCGGACAGCGG 1424626 37 100.0 35 ..................................... GTGCTGGCCTGGGTCTGCCGGGGCTGGCGCGACGA 1424698 37 100.0 36 ..................................... GCCGAGGCCGTCAAGACCGCGATCACGACGGAAGAG 1424771 37 100.0 37 ..................................... GTCCAGTGCGCCGAGGGCACGGCGCGCGAGCGCGTCC 1424845 37 100.0 34 ..................................... CTCGCCATCGATCCCGCCGTGGTGGTAGGCCGCG 1424916 37 100.0 34 ..................................... TCGGGAAGGCGGAGGCCGACGCCGCGTGGATCGC 1424987 37 100.0 35 ..................................... GTCTCGGTCCACGATGCGATGACCGTGGTCCCCTG 1425059 37 100.0 36 ..................................... ACCTTGGCGTCCCACGCCTTGGCGTGCCGCTCCGGG 1425132 37 100.0 37 ..................................... GTCGCGAACGACATCTGCGTCGTGCTCGACCTCCACC 1425206 37 100.0 38 ..................................... CGGCGGGTTCGGGGTGCGGCAGCGCACGGCTTTGGAGG 1425281 37 100.0 39 ..................................... GGGAAGTCCGATCGCGGCGCCCGCGCGCCCGACTACCGG 1425357 37 100.0 34 ..................................... CAGTCTGTATTACGCATCACCCCCGAATGCCTCT 1425428 37 100.0 36 ..................................... GCGTCGACCACGACCGGATAGCCGCCCTGGAGTGCG 1425501 37 94.6 37 ............G..G..................... TACGGCGACGGCAGCGCGAGGATCGCCGAGGCGTCGA 1425575 35 89.2 0 ............-...C..T..............-.. | C [1425591] ========== ====== ====== ====== ===================================== ======================================= ================== 20 37 99.2 36 GTCGCACCGGCCAGAAAGGGCCGGTCACCGTTGGAGG # Left flank : AACAAGGACGCTCTCCCCCATGACCTGACCGCCACGTCCACCAGTTGGACCACCCGCACCCCCGTCCTGCTCCAACGCTGGGCACCGGCCCGCATCCCAGCCGACACCCATCTCATCAACGAGATCCACCGCGAACTCGCCCACCGCAACATTGCGACGCCCGTCACCATCACCGTCCTGCCCGCCCACGACTGGAGCCGCTACCGCCGCCACCGCCCCACCCGCCAGCAGCCACGCAACCACCGTCCGCTCTACGGCCTGCGCCTCGACTTCACAGCCCCCGTCCCCGGCCCCCTCCACCTCGGCGCCAACACCCACTTCGGCCTCGGCCTCTTCCAACCCACCCCGCCATGACCCGACCACCCACCGACTTCGGAACCCCAAGCACCCACAGAATCACCGGGAGGTTCCGAAGCACGTTGCAACACTCGACTGGACAAACTGGACAACAACCGAGCACTCCCTCAGCCACTCCCAGTAGTAACCGCAGTTCGCGCGGC # Right flank : GCGAGCAAGGGCGCTTCGCCACTGACGCCCTGGCTGCGTCGGTCTACTAGTGAGAAGCCGTGCCGGTCGTCCACGGGTGGGCGGCCGGCACGGCTTCTTTGATCGTGGACAGGACACGAACACGCCGGTCTCTGTCCCGTCTCTCCTTGGGAGGGCTTGGGAGATGGTCGGGTTAGACGGTGTCGTTGCGGAGGGCGTGAATCAGCGCGGCGAACTCGGCGCGGCCGAGGGACAGGCGCGGACCTTCGGGGTCCTTTGAGTCACGGACGCCGACCACCGGAAACAGGTCCGCAACTTCCACGCACTGCCCGCCGTCAGCGCTGCTGTGGGACGACTTGCGCCACCTGGCGCGCGTTGAGTCGGTCATCGTAGCTGCTCTCCATCAGGGACGTGATCAGGTCGATGCTCGCCGAGGTCGTCAGGGCTACATTCCTGACCAGCTCGAACCGTTCGGAAAAGGAGGCTACCGCCTGCGGGTCCTGAATGTAGGAGCCGTAGCC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCGGCCAGAAAGGGCCGGTCACCGTTGGAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.90,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //