Array 1 1745-125 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSTK01000014.1 Ligilactobacillus salivarius strain NT4_8 scaffold14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1744 36 100.0 30 .................................... AAAATGTGTGCGTTTGTGGCTGATATGGCT 1678 36 100.0 30 .................................... GCGCCTTCATTATGGTTTGTGTAAGCATAA 1612 36 100.0 30 .................................... GGGTTACGAGAGCCTTGCGACAGACGTTGA 1546 36 100.0 30 .................................... TAAGTTGATAGTTGAATACAAACTAGAAGG 1480 36 100.0 30 .................................... AAGGATCTATGACAGGGTTCTAACTCTAGG 1414 36 100.0 30 .................................... AAGGATCTATGACAGGGTTCTAACTCTAGG 1348 36 100.0 30 .................................... AAGGATCTATGACAGGGTTCTAACTCTAGG 1282 36 100.0 30 .................................... AAGGATCTATGACAGGGTTCTAACTCTAGG 1216 36 100.0 30 .................................... AAGGATCTATGACAGGGTTCTAACTCTAGG 1150 36 100.0 30 .................................... AAGGATCTATGACAGGGTTCTAACTCTAGG 1084 36 100.0 30 .................................... AAGGATCTATGACAGGGTTCTAACTCTAGG 1018 36 100.0 30 .................................... AAGGATCTATGACAGGGTTCTAACTCTGGG 952 36 100.0 30 .................................... ACAACAAATGTTAGCAGTGGCTGACTTACA 886 36 100.0 30 .................................... TTATAACAAGAAAGATTTTTATCAAAATAA 820 36 100.0 30 .................................... TTCAGATATTAGAAAGAAATATCAAGATGA 754 36 100.0 30 .................................... AAGGAAAGTTAAGGTCAATGGTTTTACATT 688 36 100.0 30 .................................... AATTGGTGTATCCTGAAATCTACTTTTTGA 622 36 100.0 30 .................................... GCATTAGACGCTAAAAAAGTACAGTTAAGC 556 36 100.0 30 .................................... AATCTTATCGTATAATTACTAACATACGAA 490 36 100.0 30 .................................... TTTTTTGATAGTCTGTAAACTCTAGCTCTT 424 36 100.0 30 .................................... CGCAATTTTCGATATTTTACCAATCAACCC 358 36 100.0 30 .................................... ACAACACTGGATATTTTAAGTTGAGAGAAT 292 36 100.0 30 .................................... TAAAGACGCTGAATACACACCAATGGTTTA 226 36 100.0 30 .................................... ACAACTGGAGTTTGAGTACGTTTAGCTTGT 160 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 99.2 30 GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTGATCAAGAAGATTATTGAAGACATCACAGATGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGTGAGATTTTGTATAAAATTGATATACCCTTACAAGCAGATTATGATAATGATTTAATAAGACTATTCAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAGTGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTATATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACT # Right flank : CTAAAATACAAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGAGTAAACACACTATAGTGTGACATTACAGATAAAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //