Array 1 81157-80002 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHBFB010000020.1 Leuconostoc gelidum subsp. gasicomitatum strain R-46710 NODE_6_length_81082_cov_61.161690, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 81156 36 100.0 30 .................................... GTGACCAATCAGTGGGTAAGTTTCCCGACT 81090 36 100.0 30 .................................... CGGAGCTACCGTTATACTGGTCTCGGGTAG 81024 36 100.0 29 .................................... GCAGAACAAATTTGGAGTTTGGTGCCTTC 80959 36 100.0 28 .................................... TCATGGCACGAGGCTATTCTTTTTATTC 80895 36 100.0 30 .................................... TTGTAGGAAAAGAAACAGGATACGATCGTT 80829 36 100.0 30 .................................... AAAGAATGCTGACCTTATTAAGAAAAGTCT 80763 36 100.0 30 .................................... TTCACACGTGGTTGTAGCTGCTTCTTCGTA 80697 36 100.0 30 .................................... TCTGCCATTCTGTAAGTAGAATACAACGAG 80631 36 100.0 30 .................................... TGATGTTGGCACAAAAGTTCAAATATTGCC 80565 36 100.0 30 .................................... TAAGGTATTAACCTATGTATCCAACCATTC 80499 36 100.0 30 .................................... TACTATAATTGCATAGTAAACAATCATAAA 80433 36 100.0 30 .................................... TAGAAAAAGGGGACTAACCATGTTTAATTA 80367 36 100.0 30 .................................... TGATTTACCGACTAGAGAAACGTACAGAGG 80301 36 100.0 30 .................................... AGTTGTTATCCGCATTGTCCACATTACCAG 80235 36 100.0 30 .................................... AAATATTTCACCCGAAGACTTAGTAAGCAT 80169 36 100.0 30 .................................... TGACCGTCTCACTGCTGGCGAAGAACATGA 80103 36 100.0 30 .................................... TGTCATACTTGATATTGTAGTTTCTTTCGA 80037 36 94.4 0 ..............................C...A. | ========== ====== ====== ====== ==================================== ============================== ================== 18 36 99.7 30 GCTTCAGATGTGTGTCAGATCAATGAGGTTTAAACC # Left flank : | # Right flank : TTATATACATGGCAATCTATATTGAAATTAAATACCATATTAATAAGATGAAAGCGCTTAGGCGCTTTTTATATGCCATATATGTCAAAAAAGAAGTTTACGCGAATAACGATTATGGTATGATATATTATGTTATAAATAATCACGTCAAACGTGAGATGGAGAAAGGGAGATTTTCCTGTTTTGGTAAATAAAAAATTGCGAGTGAAAGAACTACTTGTTTCAACAATAATTATTGGTGGCGTTCTGGGCACCATGTCTACGGTTAATGCTGCTGAAAATACAGCGCATGTATCGACACAAGTGCCAAGTACAATAGCATCAGGTTCGAGTGGTACATCACAAGCGCCAAGCACTAAGACACCAAGTTCAACCATAAATGAGTCGAGACAAAATGATAATTATAATGTGACGCCGTCAACAAAGTCTATTCAAGTACACCAAGCTAAATTTAAAACCGGTTCTGTAATCACATTGACTAATTCAGCAAAAACGTCCAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAGATGTGTGTCAGATCAATGAGGTTTAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 8431-10248 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHBFB010000004.1 Leuconostoc gelidum subsp. gasicomitatum strain R-46710 NODE_12_length_10212_cov_63.862320, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 8431 36 100.0 30 .................................... TTAAATTTGGTATTGTATTGCCAGCCACAC 8497 36 100.0 30 .................................... TCAAAAAGTTCAGGTGTTACCGCACGCTTA 8563 36 100.0 30 .................................... GAAAAATTGAGGGTGCAGTCTTTAATCCAT 8629 36 100.0 30 .................................... TTTTCTTTTATCGAATTTATCACATCTAAG 8695 36 100.0 30 .................................... GTCAACAATTTGCTGTAAATCTTCATCCGT 8761 36 100.0 30 .................................... TTGACCGTATTGTGCACCCCCAGCCAACCA 8827 36 100.0 30 .................................... TGCGTCACCTGCACTTGCGCCACTTGCAAG 8893 36 100.0 30 .................................... ACGGTATGCAAAGTTGAATGCTAGTGATAG 8959 36 100.0 30 .................................... TATCCTTTAATTCAACCAGTACGGCAACCT 9025 36 100.0 30 .................................... GACAGAACATTATTTCTTCCACGAATATAT 9091 36 100.0 30 .................................... ACCAAACATATCAGCAATGACATCAGCACT 9157 36 100.0 30 .................................... CACTGCTACTGGCAACCATTATAGGTCTAT 9223 36 100.0 30 .................................... ATCCCGCTTGTGGCTGTATCAATTGCTAGT 9289 36 100.0 30 .................................... TACCAACAAAAATCAGTTGTTACGTATGGG 9355 36 100.0 30 .................................... ACTTAATTTTCTCTGTATTTACGATCATTT 9421 36 100.0 30 .................................... CCATGTTGCCACTAACTAGACCGAATATTT 9487 36 100.0 30 .................................... TTAGCTATTGAAGCGTGGGACATTACGGGA 9553 36 100.0 30 .................................... TTCACACGTGGTTGGAGCTGCTGCTTAGTG 9619 36 100.0 30 .................................... TTAATTCCCCATTGTCTTGGCCAATGTGAC 9685 36 100.0 30 .................................... TTCACACGTGTTTGGAGCTGATTCTTCGTA 9751 36 100.0 30 .................................... AAATAGCGGTATTGACACCTGATATGGTCA 9817 36 100.0 30 .................................... AAATCCCTTACCATTAGTTTACCACGTCTA 9883 36 100.0 30 .................................... TAAGTGATGGTATCCACGGATACACCTATC 9949 36 100.0 30 .................................... GCTCGGTGCATCACTGAAGTAGTGGGCTCC 10015 36 100.0 30 .................................... AATGATTCAATAGGAATTGAAAAGTATTCA 10081 36 100.0 30 .................................... AACAAAAGATAAGCATTATCAGGATAGTCG 10147 36 100.0 30 .................................... TACATTCATTATAACAGCACGTGTATTAAC 10213 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 28 36 100.0 30 GCTTCAGATGTGTGTCAGATCAATGAGGTTTAAACC # Left flank : GGTGCGCAACTTGATGTGAATAAGTTGTATCAAAAAAATATCGTTAATACAATGAAAAATTATGCAGATGATCAAGCGTTAGAAGTGTTTTATAAAATAAATTCCGAATTAAATCATGTCTTAGAAAACATTATATTAGAGAACAATCTGCCCTTTTATTTTCAAACAGAATTCAATATTGTCGAATTAATAAATGAGAAAAAAATTAGGATAGAAACACTGACAAACAGCTCTGGATTTGGTAAAATAGAAGATGTAGTAAGCGTTGCTGGTGAGTTCTTAGAGCAACGTTTAATCGTTTTTACGAATTTGTATTTGTTGTTATCGGTTGATCAGATTGACTATCTGAATAATCTAGCGAAGACAATGAATTTATGTTTAATTTCTCTTAATTTGACACAAAACCCTGTTATGACTAAACAGGGTCTACCTCCAGAAATCTTTATTGATGAGGATTTCGTTCAATTTGGTGCTGACTAGCTGATGCGAACAGGCGGTCT # Right flank : TGATGTACAAGCATTAATGTTAGAAGATGAGCTTCAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAGATGTGTGTCAGATCAATGAGGTTTAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //