Array 1 249823-248956 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJFCS010000002.1 Enterobacter hormaechei strain 61347CZ NODE_2_length_301123_cov_36.128444, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 249822 28 100.0 32 ............................ TCCTCCAGTGCCGCGCCTTCGATCGCTTCACC 249762 28 100.0 32 ............................ AGCACGAATACAAAAGCAGTAGTCATCAACTT 249702 28 100.0 32 ............................ CTCAGCTGTAATGCGCTCCACGCTGTTGATAC 249642 28 100.0 32 ............................ TCCATCGCTACGGCCTGGTTGATTACCATTTT 249582 28 100.0 32 ............................ GGTGAGCGCAGCAGCATGACGGCGCTGAAGAA 249522 28 100.0 32 ............................ ATTGCACTGAAACTATCCAGCGCACGGAAAAA 249462 28 100.0 32 ............................ GTTATGGATTTCGACGCCAGTAGGGAATGACA 249402 28 96.4 32 ..........A................. TGACTGCCCAGGGTGATTTTGTACCGCCGAAA 249342 28 100.0 32 ............................ AGTCGAATTGTTGCCAGTCGGCTTTATCCATA 249282 28 100.0 32 ............................ TGGAGCCTGAAAGGTGATGCGCCAGCTCCGGC 249222 28 100.0 32 ............................ GACAACATCAACAATCGTCATTGCTGCCATCA 249162 28 100.0 32 ............................ GATGGGGAGCGGCAAAACACAGGCGCTGCTTC 249102 28 100.0 32 ............................ GCTACGGCTGCGGGTATGAATCCGGTTTTATC 249042 28 100.0 32 ............................ TCATCGAGTGTAAGGCTGTGTGATTTTATTGT 248982 27 71.4 0 ......CA.......AC..A.AC.-... | ========== ====== ====== ====== ============================ ================================ ================== 15 28 97.9 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTGATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCTATCAGCCGCATGCCTCTGCTTGCAGGCAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTGAGGGGGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGACCCTAATTTTTGACCAAAATGTAATCTATTGATTTTTCGGTTAAATATCCTGGAGCGCAAAAAAAGGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGGTATTATTTCA # Right flank : CCCGAAACAACCCAACCAATCGTTCAAATAATCGACTGTACTAACAAAAAAATAAGGCCGGGTATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCGTATTGCCCAAGCGTCACGGTACAACCGAACAGAAAGCGCATTCGTAAAGGGGAGACGACAG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 260767-259299 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJFCS010000002.1 Enterobacter hormaechei strain 61347CZ NODE_2_length_301123_cov_36.128444, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 260766 28 100.0 32 ............................ GTGTTAACTCGCGATGGTGGTGGCCATGTTGG 260706 28 100.0 32 ............................ TCCATCTCGATGTAGACAAGGGTTTTCCCGTC 260646 28 100.0 32 ............................ AGAGATTGTTGACGACATCAGGATGATGGGGT 260586 28 100.0 32 ............................ AATCAGCAGCTGATCCATACAAGGGTTCTTTT 260526 28 100.0 32 ............................ CGTAGACACAGCGGCAACAAAGCGATCGTAAA 260466 28 100.0 32 ............................ TGACGACGGCACGACTGTCGCGATGTTTTTAT 260406 28 100.0 32 ............................ TCGCACGGACGGTGATCCGTTGGGCATGAATC 260346 28 100.0 32 ............................ GTCCAGGTCTGCGGTGAGCGCTTTTAGTTGCT 260286 28 100.0 32 ............................ ATTACCATCCGGGCCTTTACCGTTTACTGTTT 260226 28 100.0 32 ............................ GTGCGTCTCGGTCGATGCAAAGTACGTCCCGG 260166 28 100.0 32 ............................ ACAGAGTCAGAGACCAGGCCGCCACCGAACCC 260106 28 100.0 32 ............................ AGCAGGTAGACGACGCGCGCCACAGACTGTGT 260046 28 100.0 32 ............................ CTTCCCGCGTCGGTCACGCAATCGGACATGAC 259986 28 100.0 32 ............................ GCGATATCGACGTAGCTGAAAAAGAGACAAAA 259926 28 100.0 32 ............................ AGTTCAAGGCTGGCATCTTTGAGCAGTATTAC 259866 28 100.0 32 ............................ GTGGAGTTCGCCCGTTTCTGGGTCGAAGACCA 259806 28 100.0 32 ............................ GCATTTTGAGGCCCATCGTTTTGATGGTCTTC 259746 28 100.0 32 ............................ ATCGCATCCTTGACGGGCTTCGCCAGCGCAAG 259686 28 100.0 32 ............................ TTTGAAGCCGGTATAAGTATCTGCACCAAATG 259626 28 100.0 32 ............................ CATAACGACACCTTTTAAAATCGTTAATTAAC 259566 28 100.0 32 ............................ TGATTGAGCATTAACAGGGGCAGACTGTAGAC 259506 28 100.0 32 ............................ CTGACGGGTCCCGATTTTGCGCTGGGCGTGAA 259446 28 100.0 32 ............................ CTGCTCTTCGCGAAGACCAGTTAAAACATAAC 259386 28 100.0 32 ............................ GTAGACCCCGCGATGAATATTCCATACTTAGA 259326 28 78.6 0 ...................T.A..CCCC | ========== ====== ====== ====== ============================ ================================ ================== 25 28 99.1 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGTCTTGGTGCTTATCTGGACGTAGTCAAAACTGAACTCGCAGAATCAATGTGTGATTTCCGGGTAGTTGAATTTGACGACGAGGCGGAACGGCCGAAGGAAAAAGAGTGGCTTCTGGAGGATACCGAAACCAAATGCGATTACTGCCGGGCATTAAACCACGCGCTGCTGGTGTCGTATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACATATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAGCCTGTAATTCATATCATTAATTAAGTTTAGTGTCGTGCGTCGGGGGAGGGGTTCCGGCGCGGTATGGCGAAACCCTTTTTTCGAGCGGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCAAATATTCACTCCAGCTATTTTAAAACCCATAATCATCACCACAATCCTCTTTGTATTTTAAATAAAATCAATACTCATTCACCCCACAACCATATTTCCTCATATATATTATTCACAAAAATAATACATTAAATATGTCAGAGGTTTTTTATCTCGATATTCCGACAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTAATCTCCGCTAACATACCTCGCATTCAACATATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCATCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTAGAGAAATGCCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCTTTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTAATGTTGGGAATGGGAACATCCGTGACGCAAATGGCGATGCGGGAGTTCGCGCGAGCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //