Array 1 5871-6268 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIRCH010001059.1 Streptomyces sp. PSKA30 287, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 5871 29 100.0 32 ............................. GGCGCGGCAATCCGAAGCCGCCCGATGGTCGC 5932 29 100.0 32 ............................. CGCCCGGGTATGTGCTGTGGCCGCGCTGGGCT 5993 29 100.0 32 ............................. CAGTGACCTCGCCATGGTCGCGAGCGTGCTGC 6054 29 96.6 34 .........A................... GAACGCAGCCTCAGTTGGGAAGGGTTGGCGCTCG 6117 29 100.0 32 ............................. GAGCGGGACATGGGCGCGCAGTACGGGGTGGC 6178 29 96.6 32 ...........G................. CAGAACAGGCGCTCGGCGTATTGGGCTTTCGG 6239 29 100.0 0 ............................. | G [6266] ========== ====== ====== ====== ============================= ================================== ================== 7 29 99.0 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : GGTGTCCGCCGGCCGCAACTATGCCGAAGGCGACGGCCCGGACATCGAGGAGGTGCTCTGGTGACCGTCATCGTCCTGACCAACTGCCCGCCCGGCCTTCGCGGCTTCCTCACCCGCTGGCTCCTGGAAATCTCCGCCGGCGTCTTCATCGGCAACCCCTCGGCCCGGGTCCGCGACGCCCTGTGGGACGAGGTGCGCCAATACGCGGGCCAAGGCCGCGCCCTGCTCGCCCACACCACCAACAACGAGCAGGGCTTCACCTTCCGCACCCACGACCACGCTTGGCACCCCGTCGACCACGAGGGCCTGACCCTCATCCGACGCCCCCACGACCGTAGTCAGCAGGCCACCGGCGACCCGAAGCCAGGCTGGAGTAAGGCATCCAAGCGCCGCCGCTTCGGCAGGCGTGCCCAACAATGAGCCAGATGACTGAATTGCCGGAATCGGTGAAAGTAGGGGAAACCGGCCTCTCCCCGCGCTGAAAACGCAGGTCGCGCAGT # Right flank : CAGGTTCTTCCCCCGGAAACCGCTGCCGAAGAAGTGACCATGGACGAGTGTGCCGCCGTACGCCGACGGGCAGCGGCCAGAAGCTGTCACAACCTCCGCGGTGCGGGCGGGGCGGCGGTGGTGCCATCGAAAGCCAGGACGCCGCCTCACAGCGCCAGCCCGGCCGCGCTACCCGATCAGAGGCGATGTAGTGGAGCCGTGCTGTCAACCCAGTGCCAATTCACCGGATGCCACTGCCTCTTGAGGGCAGTGCGCTCCTTGGCGTAGGAGCGCAGCGCGTCCTCCACCACCTGGCCGAGGTCGCCGAGGGCGGCTGGGCATGGGATGCGGAGCATCAGGTGCTGCGTGCGGTGAACGAGGATCAGCTCGCCCGTGGGGGTGCAGTCCACGAGCGTGAAGTGTTTGAGCAGCTTGTACCGCGTGTCTTCCAGGTCCAGTCGTTGGGCTCGGACTCCCGTGGCCGTCCAGGCGAACAGTCCGTACTGGTTGAGGTGGTAGAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1073-1956 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIRCH010000818.1 Streptomyces sp. PSKA30 593, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1073 29 100.0 32 ............................. AAGCTGATCGTGGAGGCCGTCGACAACGGATA 1134 29 100.0 32 ............................. GGCGGCCGGTGTCCGGGCTTGGCCGGGTAGAA 1195 29 100.0 32 ............................. GCGCCCCCGTACTTCGAGGCGTGATTGGGGAC 1256 29 100.0 32 ............................. CAGCCGTGGGTGGCAGAGACCCGCTCCAAGTA 1317 29 100.0 32 ............................. CGCCGAGACCGCGAAAGCCGAGGCGCAGAGGG 1378 29 100.0 32 ............................. TGCGGATCACACCGGTGACACCAGCCATGGTC 1439 29 100.0 33 ............................. CTCCGCCACCAGGTCCTGGATCGCGTCGTAGAA 1501 29 100.0 32 ............................. GATGGTGCCGTTGCCGGGGATGGGGCGGGTTT 1562 29 100.0 32 ............................. GTTCCCTCCGCTCAGGCTGCCTCGGGCGCCCG 1623 29 100.0 32 ............................. CGACCAAGGAACGCGCTCGACAGGAGTTCTGC 1684 29 100.0 32 ............................. CCCTCTCGGTCAGGAACCTGACGAGAGCCGAG 1745 29 100.0 32 ............................. GTCACTTCCGAGGAGGTCCCGGACGCCAGGAT 1806 29 100.0 32 ............................. AGCCCTGCCGCACGGGCCTCGACGAGGCTCCC 1867 29 100.0 32 ............................. GGTGGTCCGGCTTTCTCGATGCTCAGGAAACG 1928 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 15 29 100.0 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : TGCCTTCCCGATGTCATGCACCCCCGCCAACCACACCGCCAGACGACGCCCATCGTCCAGCCCGCCCGGCAGCACCCCCGAAATCAGGGCCCGTACGTTGTCCGGGAGCCACTGATCCCACAACAGCCCCGCCACCGCGGCGCTGTCCTCCATGTGCCGCCACAGCGGAAGCCATCCGTGACTGTCCCGATCGTGCTTGGCCCACACCGCCCGGGCTGGGGCCTGAAGCCGTGACAGCAGGTCAGTGCCAGGACTTTCCCCACTCGTCATGCAAGATGACTACACGTAAACCGGCGCCCATTCGGCCAAATTGCGGAAGCGGGCCCCAACTGGAGTTGGTGCAGGCGCCCAGTGCTCCACAAGCACGCTTGAGGCGTATGGTGATCTGTCCGCCACAAGCAACACCACGAAACTGGACGCAACGTATGCCCCATTTGCCGGAATCGGCGAAAGTGTGTGAATCCTGGCTCCTGGAACGATAGACCCGCAGGTCAGGCAGT # Right flank : CACGTCGTCGCTAGTGCCGCATCAGGCAACGTTCGCCCTGTTTACGCGGCGGCTGGGCGCAAGGTGATCAACGTTGGTTGATCAAAGGCGCTTGCTTTGTAGATGCCCGCCGATGACATGGTGCGATGCGGTCTCGATGCCGCTGGCTCCCGGATTGTGGCGGCCGCCGAGGGGAGGCAGGGTGGTCTCGAGACCGTTTGGGCGAGGCAGAAGGCACACGGCCTGTCACGGATGCCGACTGTGGCTTGTCCTCATCGCGAAGCGAGTTGTGTGAGCCGGGAACCGGCGAACTTGGTCACCGCCGAACGAGTGGGTCGGTACACCGGTCCGGAATGCGGTGGCCGACGGAAGATAGTCCATTCCGGGCAGGCTTACGGAGGTGTGGTACATGTCAGAGAAGAACCCAGATCACGGGACCGCCCACGAGGGCTTCTTGCCGTCCGAAGTCCAGTTGCTGCAGGATGTCACTCCGCCCTTCTTTCCCGAAGGTGGTTCGGGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [43.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 20-599 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIRCH010000972.1 Streptomyces sp. PSKA30 69, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 20 29 100.0 32 ............................. CGGAAGACGTTCGGCGGCGAGGTCATCCGGAG 81 29 100.0 32 ............................. ACCAAGCCGTACCTGCGGAACTGGTGGAACCC 142 29 100.0 32 ............................. AGCCCGTCGAGCCGGACAGCGATGACCGGCAG 203 29 96.6 32 ..............T.............. TCGAGGAAGCCAAACACCGCGTTGCGCTCATG 264 29 100.0 32 ............................. TACCTCGCCGTCCACCGGCCGAGGGCCCTGGC 325 29 100.0 32 ............................. CAGATTCTGCCCGAGTGGGGCGATGTGGCCGT 386 29 100.0 32 ............................. GGGCCGACCGTCGACGACGAGCCCGAGCTGCT 447 29 93.1 33 ...........G..T.............. GGCGCAGAAGATGGACAAGCCGCAGATGCAGAA GT [472] 511 29 86.2 31 .........A.C..G............T. GCAATGTCGTCAACGCGACTGTCGGTCTTCC G [528] 572 28 75.9 0 AG.T.......G..G..........-..T | ========== ====== ====== ====== ============================= ================================= ================== 10 29 95.2 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : TCCCTGTACCGGGGCCGACC # Right flank : TGTGGAGACGGGGTTGGCGCCCCTGTGTGCCTGCGACGATGACCGCGAAAGGCCCGGACAGATACCGCGTTGTCTTGCCGGGTTCGGTCAGCCATGAGTGTCATTCCCGCGCAGTACCGTCGAGGCAACGACGAGGAGGACTTGTGGCTGACCACAGCAGCGAAGCCCGAAACTATGCGCACTTGGCCGACCAGGAACTCGCACAGGTCACTGATCCGGGGCAGCGCGCAACGGCGTACGCCCTGTTAGCCCTGACCCACGCCGTACTCAGCAGAGGGGAAGGCGTCAGCAAGATCAGTTCCACTCTGTGGGAGATGGAAGATGTCTTCCGCAGTTGAAGACCGACATCGGGTTGGCGCAGGCCAGCTGGATCCAGCACGCCCAATAGGCGTTGATCAGGGCTGAGTTGCGATGGTCCGGAGGCGTACTCCGAGGACAGCACTTCGTCGAGGCTTCTCTAAGGGCTCGCAGAGAATCAACATGTTGCTTCCCGTTATGCG # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [8.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //