Array 1 113318-111947 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGMUE010000066.1 Streptomyces sp. AC627_RSS907 NODE_68_length_133301_cov_20.884434, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 113317 29 100.0 32 ............................. GGACGGAGACGGTGCCGTCGGGCCAGAGGACG 113256 29 100.0 32 ............................. CCGGCTGCATGGAACTCGAGCTGGAAGAGATG 113195 29 100.0 32 ............................. GCGGCCTTCGGCGGCAGCTTCAGACCCGCTGT 113134 29 100.0 32 ............................. TTCGTGACCATCCACGTCTTCCCCCATTTTTC 113073 29 100.0 32 ............................. CTCAACCACGCCGGCCTGCTCGACCTGACCCT 113012 29 100.0 32 ............................. ACCCGGTCTCGCGCGGGGTCCAGGATCGAGTC 112951 29 100.0 32 ............................. CTGGCGAAGCTCGCCGACGCGGAGAAGACCTG 112890 29 100.0 32 ............................. AACCCCACCGTCTACACCCTGACGCTGGACGA 112829 29 100.0 32 ............................. GCGCCTACGTCCGTGTGGCGCAACACCGTCCG 112768 29 100.0 32 ............................. ATGGGTCCCCTCCTTTGTGCGTGATCCTCCCG 112707 29 100.0 32 ............................. CGTGGCGTCTGGCAATGCCGACGCTTCGCTCC 112646 29 100.0 32 ............................. GTCGAACGCATCATCATCGTCGGTGACCGGCC 112585 29 100.0 32 ............................. GCAGGGCGACCCCCACAACGCCCAGGTCGACA 112524 29 100.0 32 ............................. CGGGCCGGGACCGTGACGGTGCCGGGCATCGG 112463 29 100.0 32 ............................. GAGGTCTTCTCCCCCGGCCTGGGGTTCGGCGA 112402 29 100.0 32 ............................. CACAACCGGATCACGGAGGCGTACGGGATCGG 112341 29 100.0 32 ............................. AGCGTCGTCCCGGCCTCGGCCAGGGCGGGGGC 112280 29 100.0 32 ............................. CCGAAGCGCCGGCGGCCCGCCGTGCCCAAGCT 112219 29 100.0 32 ............................. GACGGCCAGAGCGGACCCGTCGTACCTCCAGA 112158 29 100.0 32 ............................. GGCTGGCCGACGGTCACCAGGAACAGGGCGCC 112097 29 100.0 32 ............................. CTCGCGGCGTGCTCGCGCTCGGCCTTCTCCCT 112036 29 100.0 32 ............................. GACGTCGATCACCGCCGGCATGATCACGGACC 111975 29 93.1 0 ......................CA..... | ========== ====== ====== ====== ============================= ================================ ================== 23 29 99.7 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CTGACAGGCGAAGGCCGGGGTGGCCTTGCCGACGTCGTGCACACCGGCGAGCCACACGGCAAGGGCACGCGCGTCCGACTCCCCCCGTGGCAACGCCTCGGCGATCAGATTCCGCACCCCTACAGGCAGCCACCGGTCCCACAACAGGCCGGCCACCGCGGCACTGTCCTCCATGTGCCGCCACAGCGGCAGCCAACCGTCGCTGTCACGGTCATGCTTGGCCCACACCGACCGAGCCGGCTCCCCCAGCCGACACAGCAGGCCGGAACGGGCCTTCCCCCCATCTCTCATGAGGGATTGATACAGGGAAAACCCGGCTCGCCACACCAAAACGAGCAAACAGAAGAGTCCACCGAAAGACGGCCCCTCCAAGCCGTAGGATGATCGGCTAACCCTGGAAGCATCTACGGAGCCACACGCCCCCCATGCCCCATTTGCCGGAATCTGCACAAGTCGCTGAAAGCACGCCCCTGCGGCAATAAACCCGCAGGTCAAACAGT # Right flank : AGGCTGAAAGGTTGGCGTTGCGGTCCCCGTGTGAGCCGCTCCCCCGACCCGCACGTCCGCCGTGGACTGTGGGGTCTTCAGCCGACGTGAGCGGCGAGGGCGGCCTCGATCGCGGTCGGGCCGGCGGTGTCCGACGCCCAGGCCACGTATCCGTCGGGCCGTACCAGCACGCTCGTCCGCCGGTTCCCGGCCCAGCGCTCCACCGCCAGCCGCTCCCCGTGCGCGCCCCCGTCCGCGTACGGCTCCGGGGTGATCAGCACGAACCGGCCGCCGCGCAGCGCCTGGTGCAGGTGGCGCCCGCCGGCGAGCGCTACGTCGGGGACGCGGGCGCCGACCGTCCGGTGGGCGCCGGACGGCGCGGAGTAGCGCACTCCGATGCCGGTGATCTGGCCGGCCACCCTGCGGCGGGCCGGGCCGACGCGGCCGAGCACCGCCTCCAGGGTCCTGCGCAGCGCCAGCGTCCAGGGGCGCCGGGCCATGACGAGCCGGATCATCCCGCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 123073-125422 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGMUE010000066.1 Streptomyces sp. AC627_RSS907 NODE_68_length_133301_cov_20.884434, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 123073 29 100.0 32 ............................. GGCCGGGCGTCACCAATCCCCGGCTACGCATT 123134 29 100.0 32 ............................. GCTTGGGGCTGCCGCACGAGTCGTCGCTTCAG 123195 29 100.0 32 ............................. TGTGTGATCGGTGGGGGCTCCCTGCACCTGTC 123256 29 100.0 32 ............................. CCGCTTCCCCAGCCGCCGAGCAGCCCGAAAAC 123317 29 100.0 32 ............................. TGGCGCTCGTCGCCACGGAGCCGGCACATGGC 123378 29 100.0 32 ............................. CCCAAGATCGGTAAGGTCACAAAACTTCAGAG 123439 29 100.0 32 ............................. TCGTGCGGGGTGGGACGGCGGCGGCGCTGGAT 123500 29 100.0 33 ............................. GGATGGCGCTGGCGCAGATCTGGCCGCGGATAC 123562 29 100.0 32 ............................. CCCATCCCCCTCCGACCCTCCGACCACCTCAC 123623 29 100.0 32 ............................. GTATCGGCTACTCGACCGGCACGAGATCGGTC 123684 29 100.0 33 ............................. GCCTCGTCCTGCTGCGGACTCATCGCCGAGGCA 123746 29 100.0 32 ............................. GGGTTGGCCATGATCCCCCCGAAGTGACTGTT 123807 29 100.0 32 ............................. GCCCGCGGCAACGCCAACGGCAAGCCGCTCCT 123868 29 100.0 32 ............................. GCGGACTGGAACGCCGGGCTGGCGGCGAACTT 123929 29 100.0 32 ............................. TCATCGGACTCACGGACGATGGCAGGCATGAG 123990 29 100.0 32 ............................. TCGCGCACCTTCAGCTTCAGGCCGCTGCAGTT 124051 29 100.0 32 ............................. AGCGCGGTCAGCATCTCAGGTCTCACGCGGAC 124112 29 100.0 32 ............................. TCTGTTGTTTCTTTCCCAAGGCGACCGGATTT 124173 29 100.0 32 ............................. CCGCAGGCCCGCATGCGACTCATGGCCCAGGA 124234 29 100.0 32 ............................. GCCCGGTCGGAGAGGAGCGCGACCTTGCGGTG 124295 29 100.0 33 ............................. CACGGGGTTCGTCGCCGAGCAGCGCGGCTGGCT 124357 29 100.0 32 ............................. AACGCCAGGCACCCGGTGGATGCGTGGGCCAG 124418 29 100.0 32 ............................. CCGCACGGCCGCGGACCCGACCGAAAGCCACG 124479 29 100.0 32 ............................. AGCTTGTCCAGGTTCATGGTTCCCCCTCTCGG 124540 29 100.0 32 ............................. TCCCGCAGTGACGCGCAGGACCAGGCGCTCAC 124601 29 100.0 32 ............................. GCCTCCTGGCCGTCCTTGGCCAGGCCCAGTTT 124662 29 100.0 32 ............................. CGGCAGGCGGACAAGGCCGAAGCCCGTGCCGA 124723 29 100.0 32 ............................. ATCGGAGAGGGCTACGCCCGGGAGATCTTCGG 124784 29 100.0 32 ............................. CGGACCGCACACTACGCGTGAAGATCATCGAC 124845 29 100.0 32 ............................. CTGCGCACCATGTACGACGCGTCCGAGGCCCG 124906 29 100.0 32 ............................. GTCGCCTGAGAGGAGCTGACCAGTCATGATGC 124967 29 100.0 32 ............................. CCTGGCCGCCGCCGGCTCCCCCGCCGGGGTCA 125028 29 100.0 32 ............................. GTCGCGATCCGCCGGCACCCGCACGACGGGGA 125089 29 100.0 32 ............................. GCGAGGAAGCGCACGAGTCCGCCGAAGGTGGA 125150 29 100.0 32 ............................. TACACCGCGGAGACGATCTGATGGCGACAGAG 125211 29 100.0 32 ............................. CAATGGATTAAAAGTCTGATGACGGGCCATGC 125272 29 100.0 32 ............................. TTCGGTACGTCGCAGACGGTCACGTGAGTAGA 125333 29 93.1 32 ...................A.....C... CGGCCGTAGAACTGGTCGTCGACCCGCAGGGG 125394 29 96.6 0 .........................C... | ========== ====== ====== ====== ============================= ================================= ================== 39 29 99.7 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CGGCATCAACCACGACGGCCCCGACGACTACGGGGACGAGCTCTGGTGACCGTCATCGTCCTCACCAACTGTCCGGCCGGACTACGCGGCTTCCTCACACGCTGGCTACTGGAGATCTCCGCCGGCGTGTTCGTGGGCAACCCCTCGGCCAGAATCCGCGACGCGCTCTGGCAAGAGGTCCAGCAGTACGCGGGACAGGGCCGCGCCCTGCTGGCCCACACCACCAACAACGAACAGGGCTTCACCTTCCGCACCCACGACCACGCCTGGCACCCGACCGACCATGAAGGCATCACCCTGATCCACCGCCCCGACCCGAACGCCCCCGTCCCCGGCCCAGCTCCCCAGAACGCACCACCATCCGGCTGGAGCAAGGTCGGCAAACGCCGGCGCTTCGGCAGACGCTGATCCACACCGAGCCACTTATGTCCGATTTGCCAGAACCGATGAAAGTACTCGAAAACCGCCCCCAGCCCCAGTAAAACCCCAGGTCACCCAGT # Right flank : CGTGTCGTGGCTCATCGAGGACGGCCGCCTGAAGCTGCTCCCCGTTCACTGCGGCTGTCGCCGGCTGGGTGACTCGGCGGAGACGCAGGCGCTGGTGAACTGGCCGACGTGAAGTGCTGGCGAACCTGCCAGGCTCGGGGCGGGAAGCGCGACGGCCCCAAGGGCGCGTTCAGCAGCACCCTGAGCGGGCGCCCAGCGCGAGGTGGGCCGCCAGGCGAGGTGGCAGCGGAGCTGCCCCTTTTCCCAGCGGCCTCCTCCCGAACCCGTCGTGCGACGTTAATCGCAACGGGCTCTCCAGTGACTGCCGTGAGCTGCGGTTTCGCGTCCAACGTGGATGCCGTCGTGGCAGGTTGAGCAGACCACGAGTGTCTTGCGTCGTTTCCTGGCCATGAGGGCTGCCCAGTTGGGTTGTTCCTGCCCGAGCCGGTCGAGGTCTGCGAGCTTGCGGATCTGGTGGACCTGGATCTTTTCGGTCCGTCCGCAGAGTTCGCATGCTACGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 871-1021 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGMUE010000742.1 Streptomyces sp. AC627_RSS907 NODE_803_length_896_cov_2.549107, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 871 29 100.0 32 ............................. TTTCAGATGAAGGTCCGCGCCGCGTCGACACC 932 29 100.0 32 ............................. GCCCAGCGTCCCCCGGGGGCACGCAACCTCCT 993 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 CTGGTCCCCGCGCGCGCGGGGGTGGCCCC # Left flank : GCCCGGTACTCCTCGGCCGGCACAACCGCCTCACACCGACCGCCATGCTCGATGACCATCTCGGCGAACCACGCGTCGGGACCGTCAGCCAGACACGAGACCCCGCACAGCTCAGCCGGGGCGAACTGGCGGATCGTGTCGGCGAGTAGCGCCCTGACTCTTTTCTCGACCTGCGCTGTAAGCCCACGATGTCCGGTGCTTCCGAGACGCATGAAGATCTCTTCCTGTGAGACTAGGAATACATGTCCCTGAGCCGCTCTTCGGAAGCGCGGACGGCTCTGAGAGGCGCGGGTCACGAGCGCGATGGTGGCCGCGCTGTGGCTGGTCACCCTCGCCGAGGGCGTCGAGCCGAGCGCTGGACCGCGAGCAGGGCGATAGCCTGGAAGGCCTGACCGGCAGGGGGCTGTATGGGCGATCTGCCGAACTTGAGCGATAGGTCGGAGTTCGCGGAAGTTACAAAAAAGCGGGGTGTCGCGCGATAAAGCCGCAGGTCAATTGCT # Right flank : CACCTGCGCAAGATCTGGGACGCCGACCCCGACTGGTCCCCGCACGCGCGGGGAT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCGCGCGGGGGTGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGCCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 621-409 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGMUE010001452.1 Streptomyces sp. AC627_RSS907 NODE_1518_length_456_cov_2.335526, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 620 29 100.0 32 ............................. TGCATGTCGCGGGCCGCCGTGTCCGCGCCGGA 559 29 100.0 32 ............................. GGAAGTCGTACGGACGGTCACGGCTCCGGCAC 498 29 96.6 32 .....................A....... ATCGCCGCGCGCTCTTCGGCCGACGCCATGTC 437 29 89.7 0 .....................A....TG. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 96.6 32 CTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : CCGCAGGTCAATTGC # Right flank : CATCGACGCTGGCCTCAACTATGGCGGAGCGGCAGCGACGACAGCCGTCGCCCCGACAGAGTGTCAGTGGCATGGTCTACCGTCCAACGCATGGCCACCGACGCGCTTCCCATCAGGCCGGGTGACGTCCACACGCGCGAGGAGATCCAGCCCGTGCTGGGCGGCAGCCTGTACGGCGGCATCGTCCCGTCAGACGAGAAGGCCAACGTGCTGCTGTTCTCGTACGCGCGGGGCGGGGCCAGGTTCGGCTACCACGACGGCTGGCTGCGGGAGGAGGACGAACTCGGGCCGGTCTTCGAGTACACCGGCGCGGGCAGCGGCGACCAGGTTTTCGGCGGCCGGTACGGCAAGGGCAACTCGGCGATCCTCGGCCACGCCGACAGGGGGCGCACGCTGCACCTGTTCATCG # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [31.7-11.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //