Array 1 27623-27387 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV765944.1 Mycoplasma ovipneumoniae ATCC 29419 strain Y98 scaffold11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 27622 36 100.0 30 .................................... TTGAGGTTCTAAATGTAATAGCATAGCACC 27556 36 100.0 31 .................................... CCTTTTTCTCCACGATCACCTTGATTCCTGG 27489 36 100.0 31 .................................... CCTTTTTCTCCACGATCACCTTGATTCCCGG 27422 36 94.4 0 ............................A......A | ========== ====== ====== ====== ==================================== =============================== ================== 4 36 98.6 31 GTTTTTGTGCTGTACAATTTCTTATTAGGGTAAAAC # Left flank : TGTACAATTTCTTATTAGAGTAAAACTTTTTGTCTAAAATAAAATAGAAAAGGGT # Right flank : AACACTCAAAACCTGTAGTTATACTACATTCATGAGTGTTTTTTCACTTATTAATTAATTTTAAATTTTAGGGTCTAAAGTACTAATTATTTTCTAACTTTTTTGTTTTTGTTAATAAGGTATTCTTCCAATTTTCTTTGCTCATTAGATTCATATTCATTCCCTAGTTCGTCAAGGCTAACAAATTGAAATTCATTAAGAAGACCACTTGTTGCAGGTTTGAACGATTCTAACTTCGTTACAATCGATTCTATTGTGAATCTAGTATCACCTTTTTTTCCTTTAGTTATACCAGAAATATAAAAATAATGATTATCATCCGGTCTTATAAGAATTGATTTTTTAGAGTCTGTTGCTTTTTCTTCAAGGGTTTTTGCTTTGTTATTTTCAGATTTAAATTTAAATTCTTTATCAACTTTTAATTTTAGAATTGCAGATTTCTTGATTATAAATATTGGTTTTGATTGATGATCAATACCCACATTGTCTTTGTATTTTTT # Questionable array : NO Score: 5.59 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTGCTGTACAATTTCTTATTAGGGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 490-28 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV765938.1 Mycoplasma ovipneumoniae ATCC 29419 strain Y98 scaffold4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================================ ================== 489 36 97.2 30 ...............................C.... ACCTTGAACCCCGGTAATACCAGGCACACC 423 36 94.4 30 ..G.................T............... TTAGTAGTCAATTAGCAGATCACCCAATTT 357 36 97.2 60 ......T............................. ATATGCTTTTTCAAGTTCTCTTATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 261 36 75.0 30 NNNNNNNNN........................... ATTTCCATCCGTTAGATAATTTGATGGCTG 195 36 100.0 30 .................................... CAAAGGTTTCCAAAAGAACGCCACCTGCTC 129 36 100.0 30 .................................... CGTATAAGCGAGCAAGAAATAAATAGTATG 63 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================================ ================== 7 36 94.8 35 GTTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTGTACAATTTCTTATTAGAGTAAAACACCTTGAACCCCGGGAATACCAGGCACACC # Right flank : CCAAAGGTTTCCAAAAGAACGCCACCTG # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:-0.23, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.77 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //